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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
58.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
31.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
18.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
4.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
3.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
3.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
1.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD5 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
263.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
223.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
213.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
207.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
197.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
193.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
180.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
141.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
136.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
116.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
107.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
102.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
86.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
85.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
84.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
84.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
81.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
79.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
78.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
76.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
75.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
73.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
72.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
71.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
67.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
67.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
67.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
62.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
61.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
60.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
58.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
57.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
50.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
49.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
49.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
48.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
48.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
47.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
46.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
45.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
44.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
43.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
43.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
43.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
43.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
42.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
42.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
42.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
42.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
41.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
40.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
40.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
39.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
39.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
38.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
37.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
37.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
36.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
36.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
35.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
34.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
34.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
34.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
34.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
32.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
28.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
28.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
27.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
27.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
26.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
26.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
24.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
22.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
22.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
22.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
21.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
21.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
20.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
16.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
16.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
15.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
12.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
10.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
10.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
9.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
9.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
9.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
8.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
8.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
8.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
8.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
8.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
7.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
7.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
7.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
7.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
7.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
7.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
7.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
6.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
6.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
6.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
6.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
6.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
6.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
6.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
6.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
6.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
6.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
6.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
5.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
5.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
5.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
5.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
5.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
5.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
5.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
5.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
5.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
5.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
5.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
5.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
5.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
5.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
5.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
5.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
5.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
4.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
4.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
4.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
4.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
4.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
4.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
4.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
4.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
4.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
4.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
4.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
4.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
4.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
4.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
4.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
4.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
4.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
4.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
4.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
4.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
4.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
4.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
4.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
3.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
3.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
3.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
3.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
3.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
3.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
3.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
3.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
3.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
3.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
3.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
3.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
3.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
3.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
3.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
3.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
3.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
3.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
3.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
3.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
3.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
3.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
3.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
3.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
3.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
3.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
3.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
3.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
3.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
3.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
3.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
3.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
3.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
3.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
3.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
2.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
2.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
2.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
2.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
2.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
2.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
2.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
2.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
2.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
2.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
2.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
2.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
2.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
2.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
2.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
2.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
2.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
2.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
2.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
2.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
1.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
1.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
1.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
1.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
1.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
1.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
1.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
0.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
0.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
138.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
83.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
50.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
47.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
47.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
34.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
32.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
27.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
26.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
25.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
25.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
10.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
9.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
9.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
9.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
7.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
7.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
7.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
7.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
6.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
6.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
6.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
6.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
6.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
6.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
5.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
5.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
5.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
5.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
4.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
4.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
4.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
4.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
4.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
4.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
4.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
3.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
3.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
3.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
3.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
3.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
3.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
3.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
3.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
3.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
3.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
2.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
2.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
2.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
2.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
2.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
2.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
2.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
2.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
2.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
2.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
1.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
1.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
425.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
376.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
216.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
215.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
208.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
191.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
164.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
163.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
145.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
134.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
134.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
133.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
129.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
125.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
118.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
116.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
114.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
110.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
110.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
104.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
104.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
100.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
100.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
100.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
94.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
88.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
87.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
85.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
80.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
79.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
79.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
78.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
76.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
75.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
72.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
70.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
67.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
66.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
63.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
62.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
62.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
60.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
60.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
60.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
59.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
59.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
57.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
56.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
56.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
56.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
54.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
53.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
52.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
52.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
51.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
50.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
48.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
45.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
44.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
44.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
44.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
43.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
41.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
41.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
41.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
40.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
39.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
39.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
37.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
37.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
36.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
36.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
36.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
35.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
34.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
33.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
32.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
30.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
29.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
28.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
27.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
26.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
25.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
24.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
22.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
21.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
20.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
20.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
10.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
8.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
7.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
7.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
5.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
5.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
4.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
4.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
4.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
3.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
2.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
2.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
2.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
1.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
1.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
1.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001230001
Normal
1.4
CPT0001270001
Normal
1.3
CPT0087040003
Tumor
1.3
CPT0000660001
Normal
1.2
CPT0092190003
Normal
1.1
CPT0084590001
Normal
1.1
CPT0063330001
Normal
1.1
CPT0088500001
Normal
1.0
CPT0088640003
Normal
1.0
CPT0000790001
Normal
1.0
CPT0007470001
Normal
0.9
CPT0088780001
Normal
0.9
CPT0092310003
Normal
0.9
CPT0086830003
Normal
0.9
CPT0079430001
Normal
0.9
CPT0002370001
Normal
0.9
CPT0064400001
Normal
0.9
CPT0087050003
Normal
0.8
CPT0023360001
Normal
0.8
CPT0001550001
Normal
0.8
CPT0065820001
Normal
0.8
CPT0066520001
Normal
0.7
CPT0065430003
Tumor
0.7
CPT0007870001
Normal
0.7
CPT0077320001
Normal
0.7
CPT0025580004
Tumor
0.7
CPT0092740003
Normal
0.7
CPT0001510001
Normal
0.7
CPT0010110003
Tumor
0.7
CPT0078940001
Normal
0.7
CPT0079000001
Normal
0.7
CPT0089480003
Normal
0.6
CPT0088920001
Normal
0.6
CPT0014350001
Normal
0.6
CPT0079300001
Normal
0.6
CPT0006530001
Normal
0.6
CPT0001190001
Normal
0.6
CPT0017450001
Normal
0.6
CPT0078840001
Normal
0.6
CPT0013790003
Normal
0.6
CPT0000890001
Normal
0.5
CPT0086890003
Normal
0.5
CPT0077140001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0000870016
Tumor
0.5
CPT0081620001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0086370003
Normal
0.5
CPT0065450001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0019160001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0065750003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0006730001
Normal
0.4
CPT0075720003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0088570001
Normal
0.4
CPT0026420001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0089040001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0014130001
Normal
0.3
CPT0012770003
Normal
0.3
CPT0078990003
Tumor
0.3
CPT0020130001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0088710001
Normal
0.3
CPT0079230003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0018250001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0012290003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0012570003
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0088760003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0017850003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0012920003
Normal
-0.3
CPT0077490003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0078530001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0012370003
Tumor
-0.5
CPT0071150004
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0011240003
Tumor
-0.6
CPT0000640003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0069010001
Normal
-0.6
CPT0075130003
Tumor
-0.6
CPT0075570001
Normal
-0.6
CPT0069190001
Normal
-0.7
CPT0065810003
Tumor
-0.7
CPT0082010001
Normal
-0.7
CPT0023690003
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0006630003
Tumor
-0.7
CPT0081600003
Tumor
-0.7
CPT0002350011
Tumor
-0.8
CPT0012550003
Tumor
-0.8
CPT0001500009
Tumor
-0.8
CPT0078830003
Tumor
-0.8
CPT0002270011
Tumor
-0.9
CPT0020120003
Tumor
-0.9
CPT0092790003
Tumor
-0.9
CPT0076330003
Tumor
-0.9
CPT0012670003
Tumor
-0.9
CPT0063630003
Tumor
-0.9
CPT0012180003
Tumor
-0.9
CPT0007860003
Tumor
-0.9
CPT0088900003
Tumor
-1.0
CPT0088630003
Tumor
-1.0
CPT0092160003
Tumor
-1.0
CPT0066480003
Tumor
-1.1
CPT0088690003
Tumor
-1.1
CPT0025230003
Tumor
-1.1
CPT0011410003
Tumor
-1.1
CPT0086030003
Tumor
-1.1
CPT0088550004
Tumor
-1.1
CPT0079180003
Tumor
-1.2
CPT0007320003
Tumor
-1.2
CPT0078930003
Tumor
-1.2
CPT0015910003
Tumor
-1.2
CPT0001340003
Tumor
-1.2
CPT0025880003
Tumor
-1.2
CPT0078660003
Tumor
-1.3
CPT0014370004
Tumor
-1.3
CPT0065690003
Tumor
-1.3
CPT0086820003
Tumor
-1.3
CPT0015810003
Tumor
-1.4
CPT0088970003
Tumor
-1.4
CPT0086870003
Tumor
-1.4
CPT0069160003
Tumor
-1.4
CPT0010160003
Tumor
-1.5
CPT0009000003
Tumor
-1.5
CPT0086950003
Tumor
-1.5
CPT0088480003
Tumor
-1.5
CPT0001540009
Tumor
-1.5
CPT0014160003
Tumor
-1.6
CPT0017410003
Tumor
-1.6
CPT0006440003
Tumor
-1.6
CPT0025110003
Tumor
-1.7
CPT0001180009
Tumor
-1.7
CPT0019130003
Tumor
-1.7
CPT0064370003
Tumor
-1.7
CPT0025050003
Tumor
-1.7
CPT0065930003
Tumor
-1.8
CPT0066470004
Tumor
-1.8
CPT0079380003
Tumor
-1.8
CPT0009060003
Tumor
-1.9
CPT0014450004
Tumor
-1.9
CPT0001260009
Tumor
-1.9
CPT0075560003
Tumor
-2.0
CPT0089460004
Tumor
-2.0
CPT0065870003
Tumor
-2.0
CPT0019990003
Tumor
-2.1
CPT0069000003
Tumor
-2.1
CPT0077310003
Tumor
-2.1
CPT0079270003
Tumor
-2.2
CPT0063320003
Tumor
-2.2
CPT0023350003
Tumor
-2.2
CPT0081990003
Tumor
-2.3
CPT0079480003
Tumor
-2.3
CPT0012900004
Tumor
-2.4
CPT0024670003
Tumor
-2.4
CPT0079410003
Tumor
-2.5
CPT0000780007
Tumor
-2.5
CPT0078510003
Tumor
-2.6
CPT0081880003
Tumor
-2.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
