HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.4 nTPM
HPA Brain:36.4 nTPM
GTEx:19.4 nTPM
FANTOM5:40.9 Scaled Tags Per Million
Pig:6.7 nTPM
Mouse:8.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036823Antibody HPA036824Antibody HPA061412
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedMediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.4
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
2621 Female, age 67, right hemisphere 35.3
2148 Female, age 91, left hemisphere 35.0
1911 Female, age 85, right hemisphere 32.0
1898 Male, age 80, left hemisphere 24.6
1855 Male, age 76, left hemisphere 23.4
2529 Female, age 94, left hemisphere 20.2
Dentate gyrus
nTPM: 36.4
2531 Female, age 67, both hemispheres 50.7
2530 Female, age 94, left hemisphere 50.5
2528 Male, age 74, both hemispheres 37.4
2246 Female, age 85, both hemispheres 33.0
1927 Female, age 91, both hemispheres 27.8
2010 Male, age 76, both hemispheres 19.0
Entorhinal gyrus
nTPM: 32.1
2613 Female, age 94, left hemisphere 55.4
2764 Male, age 80, right hemisphere 35.7
2686 Male, age 75, right hemisphere 30.4
1787 Male, age 76, left hemisphere 29.3
1938 Female, age 85, left hemisphere 25.9
2117 Female, age 91, right hemisphere 16.1
Hippocampus, CA1
nTPM: 30.8
2045 Male, age 76, both hemispheres 36.7
2527 Male, age 74, both hemispheres 34.0
2082 Female, age 91, right hemisphere 30.4
1873 Female, age 85, both hemispheres 29.9
2749 Male, age 80, left hemisphere 23.2
Hippocampus, CA2
nTPM: 28.3
2249 Male, age 74, both hemispheres 44.7
2437 Female, age 94, left hemisphere 36.4
1940 Female, age 85, left hemisphere 27.9
2113 Female, age 91, right hemisphere 26.2
1892 Male, age 76, both hemispheres 18.1
1963 Male, age 80, left hemisphere 16.8
Hippocampus, CA3
nTPM: 32.3
2861 Female, age 67, both hemispheres 62.9
2620 Female, age 94, left hemisphere 42.2
2436 Male, age 74, both hemispheres 25.1
1891 Female, age 85, both hemispheres 23.8
1867 Male, age 76, both hemispheres 21.3
2137 Male, age 80, left hemisphere 18.6
Parahippocampal cortex
nTPM: 31.5
2622 Female, age 67, right hemisphere 44.8
2692 Male, age 74, both hemispheres 44.1
2250 Female, age 67, right hemisphere 37.5
1990 Female, age 91, right hemisphere 32.8
2245 Female, age 91, both hemispheres 30.5
2532 Female, age 72, left hemisphere 27.4
1933 Female, age 85, both hemispheres 26.5
2693 Female, age 94, both hemispheres 26.5
2018 Male, age 76, both hemispheres 23.0
1850 Male, age 80, both hemispheres 22.2
Perirhinal gyrus
nTPM: 23.9
1847 Female, age 91, left hemisphere 28.7
2521 Female, age 94, right hemisphere 27.2
2848 Male, age 76, right hemisphere 23.5
1841 Female, age 85, right hemisphere 20.5
1794 Male, age 80, right hemisphere 19.7
Subiculum
nTPM: 25.1
2619 Male, age 74, both hemispheres 33.7
2729 Female, age 91, right hemisphere 29.4
1977 Female, age 85, both hemispheres 27.6
2438 Female, age 94, left hemisphere 23.6
1901 Male, age 80, both hemispheres 21.4
2042 Male, age 76, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 65.9
Min nTPM: 0.9
Std nTPM: 12.2
Median nTPM: 17.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 65.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 63.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 57.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 57.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 49.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 49.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 48.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 46.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 46.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 43.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 40.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.9
FF:10153-102I9 76 years, female 45.5
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.7
Pig sample Sample description nTPM
Subiculum
nTPM: 4.7
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.2
Sample A Female 5.6
Sample B Female 4.3
Sample C Male 4.5
Sample D Male 4.2
Dorsal hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 4.9
Min nTPM: 2.5
Sample A Female 2.8
Sample B Female 3.5
Sample C Male 2.5
Sample D Male 4.9
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 9.2
Min nTPM: 5.0
Sample A Female 5.7
Sample B Female 7.0
Sample C Male 5.0
Sample D Male 9.2
Ventral hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 7.2
Min nTPM: 2.4
Sample A Female 7.2
Sample B Female 4.4
Sample C Male 6.8
Sample D Male 2.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 10.2
Min nTPM: 6.8
Sample A Male 9.6
Sample B Male 10.2
Sample C Female 8.5
Sample D Female 6.8
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.7
Sample A Male 4.7
Sample B Male 4.5
Sample C Female 2.7
Sample D Female 6.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
73636029 Antisense, RP_050816_02_G03, Mouse strain C57BL/6J (56 days, male) 1.7
71212066 Antisense, RP_050816_02_G03, Mouse strain C57BL/6J (56 days, male) 1.4

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