BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:0.1 nTPM
HPA Brain:0.3 nTPM
GTEx:0.1 nTPM

CAUDATE - Antibody stainingi
Antibody HPA041610
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi 0.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.3
1857 Female, age 85, left hemisphere 0.5
2289 Male, age 61, right hemisphere 0.5
1781 Male, age 74, unknown 0.4
1854 Male, age 80, left hemisphere 0.3
2481 Female, age 94, left hemisphere 0.3
2290 Female, age 72, unknown 0.2
2288 Male, age 75, left hemisphere 0.1
2846 Female, age 79, unknown 0.0
Globus pallidus, externus
nTPM: 0.1
1996 Male, age 80, right hemisphere 0.2
2772 Female, age 79, unknown 0.2
2395 Male, age 75, both hemispheres 0.1
2567 Female, age 72, unknown 0.1
2646 Male, age 61, right hemisphere 0.0
Globus pallidus, internus
nTPM: 0.1
2111 Female, age 85, right hemisphere 0.2
1818 Male, age 74, unknown 0.1
2037 Male, age 80, right hemisphere 0.1
2287 Male, age 75, right hemisphere 0.1
2483 Female, age 94, right hemisphere 0.1
2566 Female, age 72, unknown 0.1
2778 Female, age 91, both hemispheres 0.1
Nucleus accumbens
nTPM: 0.3
1856 Female, age 91, right hemisphere 0.6
2824 Male, age 61, right hemisphere 0.6
1806 Female, age 85, left hemisphere 0.4
2732 Male, age 80, right hemisphere 0.3
1783 Male, age 74, unknown 0.2
2286 Male, age 75, left hemisphere 0.1
2391 Female, age 94, left hemisphere 0.1
2698 Female, age 72, unknown 0.1
Nucleus basalis of Meynert
nTPM: 0.2
2393 Male, age 80, right hemisphere 0.3
2484 Female, age 94, left hemisphere 0.1
2569 Male, age 61, both hemispheres 0.1
2821 Male, age 75, both hemispheres 0.1
Nucleus of the diagonal band
nTPM: 0.1
1979 Male, age 74, unknown 0.2
1812 Female, age 91, both hemispheres 0.1
2029 Male, age 61, right hemisphere 0.1
2195 Female, age 85, both hemispheres 0.1
2775 Male, age 80, right hemisphere 0.1
Putamen
nTPM: 0.2
1937 Female, age 91, right hemisphere 0.4
2466 Female, age 79, unknown 0.4
1838 Male, age 80, right hemisphere 0.3
2489 Female, age 72, unknown 0.2
1829 Male, age 74, unknown 0.1
2482 Female, age 94, left hemisphere 0.1
2647 Male, age 75, left hemisphere 0.1
Septal nuclei
nTPM: 0.1
2059 Female, age 85, both hemispheres 0.2
2199 Male, age 80, right hemisphere 0.2
1960 Male, age 74, unknown 0.1
2009 Female, age 91, both hemispheres 0.1
2031 Female, age 72, unknown 0.1
2629 Female, age 94, right hemisphere 0.1
2394 Male, age 61, left hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 0.1
2201 Male, age 74, unknown 0.1
2486 Female, age 94, both hemispheres 0.1
1974 Female, age 91, both hemispheres 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max subtype nTPMi 0.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.1
Samples: 246

Max nTPM: 1.3
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 0.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 0.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 0.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 0.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 0.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 0.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 0.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 0.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.1
Samples: 246

Max nTPM: 1.8
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 1.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 1.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 0.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 0.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 0.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 0.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 0.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 0.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 0.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 0.7
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Brain - Putamen (basal ganglia)
Average nTPM: 0.1
Samples: 205

Max nTPM: 0.9
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 0.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 0.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 0.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 0.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 0.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 0.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 0.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 0.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 0.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 0.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 0.5
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