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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
130.9
nTPM
GTEx:
130.9
nTPM
FANTOM5:
188.2
Scaled Tags Per Million
Pig:
55.8
nTPM
Mouse:
174.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
130.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 130.9
Samples: 105
Max nTPM: 224.8
Min nTPM: 64.3
Std nTPM: 33.3
Median nTPM:
162_1
79 years, female
224.8
490_1
67 years, female
214.6
35_1
74 years, female
214.1
6_1
73 years, female
193.6
142_1
61 years, female
191.9
32_1
67 years, male
191.3
149_1
88 years, male
188.5
153_1
70 years, female
187.0
2_1
77 years, female
183.5
139_1
64 years, female
179.0
42_1
85 years, male
176.1
217_1
76 years, male
173.2
17_1
71 years, male
172.3
491_1
89 years, female
169.8
81_1
67 years, male
166.6
145_1
84 years, male
166.5
415_1
77 years, female
166.2
89_1
63 years, male
165.8
117_1
61 years, male
164.6
322_1
76 years, male
163.2
9_1
66 years, female
162.5
43_1
64 years, female
161.5
137_1
83 years, male
161.3
99_1
64 years, male
158.7
237_1
82 years, male
158.1
18_1
88 years, male
156.0
115_1
83 years, male
153.2
518_1
75 years, female
152.6
126_1
63 years, male
152.3
447_1
81 years, male
148.6
4_1
88 years, female
148.3
495_1
57 years, female
146.9
319_1
81 years, male
144.8
119_1
70 years, female
144.2
316_1
62 years, male
142.9
120_1
70 years, female
142.3
405_1
91 years, male
141.4
468_1
89 years, male
141.1
347_1
72 years, male
140.9
311_1
78 years, male
140.6
503_1
68 years, male
138.7
413_1
59 years, female
137.5
375_1
74 years, female
135.5
307_1
66 years, female
133.4
109_1
81 years, female
133.0
348_1
84 years, male
131.9
315_1
62 years, female
131.2
499_1
55 years, female
131.1
265_1
87 years, male
131.0
324_1
76 years, male
130.8
414_1
84 years, female
127.5
377_1
82 years, female
125.2
335_1
73 years, female
124.5
389_1
86 years, female
123.6
251_1
78 years, male
123.3
466_1
57 years, female
120.9
352_1
62 years, male
120.5
320_1
89 years, female
118.4
501_1
88 years, male
118.4
386_1
76 years, male
117.9
291_1
76 years, male
117.6
313_1
79 years, female
116.4
526_1
61 years, male
115.9
286_1
68 years, female
114.6
229_1
69 years, female
113.6
293_1
68 years, female
113.6
243_1
75 years, male
112.8
254_1
77 years, female
112.6
480_1
63 years, male
112.5
396_1
62 years, male
112.4
41_1
94 years, female
111.7
246_1
77 years, male
111.4
218_1
71 years, female
110.6
406_1
79 years, male
110.0
189_1
76 years, male
109.9
314_1
67 years, male
109.6
266_1
85 years, male
108.4
355_1
70 years, female
107.1
292_1
71 years, male
106.6
321_1
62 years, female
105.6
379_1
60 years, male
105.0
172_1
72 years, female
104.3
404_1
82 years, female
104.0
288_1
66 years, female
102.7
350_1
84 years, female
101.6
318_1
68 years, male
101.3
425_1
59 years, female
100.6
173_1
67 years, male
100.0
394_1
75 years, female
98.6
356_1
87 years, female
97.4
264_1
73 years, female
95.8
384_1
83 years, male
95.7
354_1
81 years, female
95.6
295_1
61 years, female
93.5
517_1
88 years, male
93.4
353_1
82 years, female
92.5
506_1
65 years, male
92.2
317_1
60 years, male
89.2
376_1
75 years, female
88.5
177_1
74 years, male
85.5
349_1
83 years, male
85.3
351_1
91 years, male
84.7
452_1
88 years, female
71.4
163_1
78 years, male
66.1
308_1
70 years, female
64.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
