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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPAG16 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
28.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
22.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
10.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
5.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
5.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPAG16 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
55.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
47.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
43.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
41.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
39.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
36.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
32.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
31.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
29.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
29.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
28.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
27.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
27.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
26.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
24.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
24.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
21.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
20.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
20.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
19.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
18.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
18.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
18.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
18.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
18.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
17.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
17.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
17.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
17.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
16.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
16.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
14.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
14.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
13.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
13.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
11.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
10.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
10.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
8.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
8.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
8.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
8.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
6.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
5.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
5.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
5.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
5.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
5.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPAG16 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
53.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
38.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
27.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
24.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
24.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
23.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
23.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
23.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
22.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
21.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
20.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
17.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
12.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
12.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
9.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
9.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPAG16 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
85.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
63.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
54.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
51.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
47.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
46.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
39.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
36.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
36.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
35.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
35.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
35.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
34.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
34.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
33.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
32.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
32.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
32.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
30.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
30.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
30.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
30.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
30.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
29.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
29.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
29.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
29.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
29.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
29.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
28.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
28.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
27.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
26.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
26.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
25.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
24.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
24.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
24.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
24.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
24.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
24.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
23.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
23.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
23.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
22.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
22.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
20.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
19.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
17.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
17.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
17.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
17.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
16.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
16.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
16.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
11.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
11.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
7.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
6.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
