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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBXN4 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
117.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
85.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
82.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
80.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
76.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
76.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
68.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
67.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
67.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
66.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
65.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
65.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
64.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
64.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
60.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
60.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
59.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
58.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
58.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
58.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
58.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
57.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
57.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
56.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
55.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
55.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
54.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
54.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
53.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
53.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
52.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
52.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
52.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
51.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
51.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
50.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
50.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
50.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
49.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
49.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
49.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
48.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
48.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
48.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
47.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
47.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
47.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
47.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
47.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
46.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
46.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
46.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
46.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
44.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
44.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
44.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
43.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
43.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
43.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
43.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
43.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
43.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
43.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
43.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
42.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
42.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
42.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
42.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
42.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
42.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
41.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
40.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
40.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
40.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
40.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
40.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
40.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
40.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
40.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
39.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
39.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
39.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
38.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
38.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
38.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
38.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
38.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
37.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
37.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
37.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
36.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
36.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
36.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
36.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
36.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
35.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
35.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
35.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
35.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
35.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
34.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
34.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
34.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
34.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
34.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
33.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
33.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
33.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
33.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
33.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
32.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
32.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
32.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
32.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
32.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
32.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
32.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
32.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
31.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
31.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
31.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
30.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
30.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
30.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
29.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
29.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
29.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
29.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
29.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
29.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
29.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
28.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
28.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
28.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
28.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
28.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
28.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
28.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
27.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
27.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
27.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
27.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
26.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
26.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
26.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
25.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
25.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
25.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
25.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
25.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
24.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
24.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
24.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
24.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
24.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
24.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
24.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
23.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
23.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
23.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
23.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
23.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
23.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
23.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
23.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
23.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
23.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
23.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
23.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
23.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
23.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
22.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
22.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
22.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
22.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
22.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
22.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
22.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
22.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
21.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
21.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
21.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
21.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
21.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
21.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
21.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
21.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
21.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
21.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
20.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
20.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
20.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
20.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
19.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
18.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
18.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
18.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
18.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
18.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
17.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
17.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
16.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
16.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
16.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
16.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
16.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
16.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
15.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
14.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
14.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
13.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
13.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
13.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
12.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
12.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
12.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
11.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
9.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
6.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
5.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
3.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBXN4 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.6
Number of samples
231
Samples
Sample
Description
TPM
DO45237
0 years, male, NA, stage:2, alive, 900 days
95.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
91.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
86.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
82.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
82.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
81.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
81.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
77.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
76.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
75.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
74.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
72.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
71.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
69.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
69.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
68.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
68.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
68.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
67.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
66.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
66.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
65.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
65.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
65.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
64.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
64.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
64.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
64.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
64.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
64.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
63.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
63.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
63.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
62.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
62.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
62.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
62.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
62.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
62.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
61.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
61.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
61.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
60.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
60.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
59.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
59.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
59.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
58.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
58.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
58.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
58.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
57.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
57.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
57.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
57.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
57.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
57.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
57.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
56.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
56.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
56.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
55.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
55.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
55.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
55.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
55.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
55.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
55.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
55.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
54.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
54.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
54.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
54.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
54.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
54.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
54.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
54.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
53.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
53.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
53.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
53.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
51.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
51.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
51.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
51.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
51.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
51.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
51.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
50.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
50.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
50.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
49.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
49.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
49.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
49.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
49.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
49.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
48.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
48.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
48.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
48.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
48.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
48.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
48.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
47.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
47.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
47.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
47.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
47.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
46.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
46.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
46.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
46.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
46.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
46.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
46.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
46.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
46.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
45.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
45.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
45.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
45.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
45.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
44.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
44.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
44.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
44.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
44.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
44.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
44.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
44.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
44.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
43.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
43.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
43.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
43.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
43.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
43.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
43.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
42.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
42.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
42.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
42.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
41.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
41.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
41.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
40.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
40.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
40.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
40.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
40.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
40.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
39.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
39.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
39.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
39.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
39.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
39.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
39.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
38.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
38.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
38.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
38.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
38.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
38.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
38.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
38.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
38.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
38.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
37.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
37.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
37.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
37.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
37.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
36.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
36.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
35.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
35.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
35.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
34.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
34.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
34.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
34.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
34.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
34.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
33.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
33.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
32.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
32.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
32.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
32.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
31.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
31.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
31.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
31.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
31.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
30.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
29.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
29.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
28.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
28.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
28.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
27.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
27.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
26.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
26.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
26.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
25.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
25.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
25.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
25.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
25.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
23.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
23.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
23.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
22.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
21.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
21.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
21.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
17.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
17.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
16.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
16.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
14.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
14.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
527
Tumor
0.7
741
Tumor
0.7
727
Tumor
0.7
171
Tumor
0.6
545
Tumor
0.6
533
Tumor
0.6
615
Tumor
0.6
525
Tumor
0.5
123
Tumor
0.5
977
Tumor
0.5
477
Tumor
0.5
227
Tumor
0.5
724
Normal
0.5
351
Tumor
0.5
647
Tumor
0.4
357
Tumor
0.4
745
Tumor
0.4
571
Tumor
0.4
431
Tumor
0.4
1045
Tumor
0.4
137
Tumor
0.4
481
Tumor
0.4
487
Tumor
0.4
261
Tumor
0.4
863
Tumor
0.3
915
Tumor
0.3
743
Tumor
0.3
515
Tumor
0.3
455
Tumor
0.3
443
Tumor
0.3
867
Tumor
0.3
353
Tumor
0.3
445
Tumor
0.3
363
Tumor
0.3
616
Normal
0.3
1027
Tumor
0.3
425
Tumor
0.3
553
Tumor
0.3
981
Tumor
0.3
1013
Tumor
0.3
963
Tumor
0.3
1015
Tumor
0.3
636
Normal
0.2
635
Tumor
0.2
132
Normal
0.2
913
Tumor
0.2
451
Tumor
0.2
627
Tumor
0.2
138
Normal
0.2
912
Normal
0.2
925
Tumor
0.2
746
Normal
0.2
921
Tumor
0.2
1022
Normal
0.2
127
Tumor
0.2
714
Normal
0.2
567
Tumor
0.2
546
Normal
0.2
271
Tumor
0.2
327
Tumor
0.2
423
Tumor
0.2
514
Normal
0.2
1014
Normal
0.2
1026
Normal
0.2
1043
Tumor
0.2
128
Normal
0.2
857
Tumor
0.2
944
Normal
0.2
922
Normal
0.2
1032
Normal
0.2
341
Tumor
0.2
911
Tumor
0.2
878
Normal
0.2
161
Tumor
0.2
873
Tumor
0.1
448
Normal
0.1
465
Tumor
0.1
368
Normal
0.1
466
Normal
0.1
744
Normal
0.1
722
Normal
0.1
356
Normal
0.1
383
Tumor
0.1
964
Normal
0.1
568
Normal
0.1
534
Normal
0.1
376
Normal
0.1
526
Normal
0.1
257
Tumor
0.1
342
Normal
0.1
196
Normal
0.1
648
Normal
0.1
883
Tumor
0.1
662
Normal
0.1
147
Tumor
0.1
955
Tumor
0.1
354
Normal
0.1
742
Normal
0.1
1028
Normal
0.1
554
Normal
0.1
361
Tumor
0.1
815
Tumor
0.1
228
Normal
0.1
882
Normal
0.1
824
Normal
0.1
358
Normal
0.1
866
Normal
0.1
424
Normal
0.1
131
Tumor
0.1
136
Normal
0.1
286
Normal
0.1
366
Normal
0.1
924
Normal
0.1
696
Normal
0.1
926
Normal
0.1
665
Tumor
0.1
966
Normal
0.1
777
Tumor
0.1
433
Tumor
0.1
411
Tumor
0.1
695
Tumor
0.1
422
Normal
0.1
426
Normal
0.1
967
Tumor
0.1
135
Tumor
0.1
1031
Tumor
0.1
918
Normal
0.1
923
Tumor
0.1
421
Tumor
0.1
968
Normal
0.1
721
Tumor
0.1
958
Normal
0.1
258
Normal
0.1
221
Tumor
0.1
786
Normal
0.1
384
Normal
0.1
518
Normal
0.1
572
Normal
0.1
148
Normal
0.1
1044
Normal
0.1
723
Tumor
0.1
862
Normal
0.1
436
Normal
0.1
537
Tumor
0.1
362
Normal
0.1
868
Normal
0.1
564
Normal
0.1
428
Normal
0.1
558
Normal
0.1
482
Normal
0.1
414
Normal
0.1
387
Tumor
0.1
563
Tumor
0.1
462
Normal
0.1
983
Tumor
0.1
1025
Tumor
0.1
513
Tumor
0.1
497
Tumor
0.1
984
Normal
0.1
671
Tumor
0.1
388
Normal
0.1
314
Normal
0.1
452
Normal
0.1
298
Normal
0.0
813
Tumor
0.0
938
Normal
0.0
463
Tumor
0.0
574
Normal
0.0
978
Normal
0.0
222
Normal
0.0
628
Normal
0.0
538
Normal
0.0
145
Tumor
0.0
982
Normal
0.0
954
Normal
0.0
975
Tumor
0.0
976
Normal
0.0
232
Normal
0.0
284
Normal
0.0
664
Normal
0.0
297
Tumor
0.0
1016
Normal
0.0
618
Normal
0.0
473
Tumor
0.0
516
Normal
0.0
755
Tumor
0.0
146
Normal
0.0
223
Tumor
0.0
214
Normal
0.0
864
Normal
0.0
916
Normal
0.0
1042
Normal
0.0
112
Tumor
0.0
785
Tumor
0.0
937
Tumor
0.0
278
Normal
0.0
818
Normal
0.0
313
Tumor
0.0
1046
Normal
0.0
272
Normal
0.0
186
Normal
0.0
953
Tumor
0.0
285
Tumor
0.0
1021
Tumor
0.0
494
Normal
0.0
528
Normal
0.0
686
Normal
0.0
444
Normal
0.0
884
Normal
0.0
415
Tumor
0.0
484
Normal
0.0
488
Normal
0.0
162
Normal
0.0
914
Normal
0.0
738
Normal
0.0
364
Normal
0.0
456
Normal
0.0
951
Tumor
0.0
172
Normal
0.0
412
Normal
0.0
352
Normal
0.0
965
Tumor
0.0
434
Normal
0.0
224
Normal
0.0
365
Tumor
0.0
642
Normal
0.0
474
Normal
0.0
778
Normal
0.0
446
Normal
0.0
464
Normal
0.0
716
Normal
0.0
191
Tumor
0.0
666
Normal
-0.1
524
Normal
-0.1
956
Normal
-0.1
617
Tumor
-0.1
393
Tumor
-0.1
483
Tumor
-0.1
187
Tumor
-0.1
111
Normal
-0.1
125
Tumor
-0.1
277
Tumor
-0.1
816
Normal
-0.1
394
Normal
-0.1
672
Normal
-0.1
713
Tumor
-0.1
814
Normal
-0.1
957
Tumor
-0.1
728
Normal
-0.1
858
Normal
-0.1
881
Tumor
-0.1
468
Normal
-0.1
1041
Tumor
-0.1
952
Normal
-0.1
756
Normal
-0.1
124
Normal
-0.1
344
Normal
-0.1
392
Normal
-0.1
472
Normal
-0.1
416
Normal
-0.1
641
Tumor
-0.1
432
Normal
-0.1
218
Normal
-0.1
492
Normal
-0.1
212
Normal
-0.1
328
Normal
-0.1
332
Normal
-0.1
523
Tumor
-0.1
262
Normal
-0.1
917
Tumor
-0.1
573
Tumor
-0.1
478
Normal
-0.1
268
Normal
-0.1
663
Tumor
-0.1
427
Tumor
-0.1
185
Tumor
-0.1
737
Tumor
-0.1
188
Normal
-0.1
447
Tumor
-0.1
498
Normal
-0.1
312
Normal
-0.1
142
Normal
-0.1
396
Normal
-0.1
114
Normal
-0.1
231
Tumor
-0.1
471
Tumor
-0.1
435
Tumor
-0.2
823
Tumor
-0.2
852
Normal
-0.2
698
Normal
-0.2
943
Tumor
-0.2
493
Tumor
-0.2
217
Tumor
-0.2
113
Tumor
-0.2
331
Tumor
-0.2
557
Tumor
-0.2
461
Tumor
-0.2
386
Normal
-0.2
141
Tumor
-0.2
195
Tumor
-0.2
126
Normal
-0.2
874
Normal
-0.2
355
Tumor
-0.2
311
Tumor
-0.2
213
Tumor
-0.3
536
Normal
-0.3
192
Normal
-0.3
861
Tumor
-0.3
661
Tumor
-0.3
343
Tumor
-0.3
375
Tumor
-0.3
367
Tumor
-0.3
267
Tumor
-0.3
715
Tumor
-0.3
491
Tumor
-0.3
413
Tumor
-0.3
517
Tumor
-0.3
851
Tumor
-0.4
685
Tumor
-0.4
697
Tumor
-0.4
391
Tumor
-0.4
385
Tumor
-0.4
283
Tumor
-0.5
817
Tumor
-0.5
865
Tumor
-0.5
211
Tumor
-0.5
877
Tumor
-0.6
395
Tumor
-0.6
467
Tumor
-0.6
535
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
