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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC20A1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
170.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
136.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
96.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
88.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
85.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
85.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
62.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
61.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
58.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
58.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
57.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
52.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
44.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
42.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
39.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
37.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
35.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
34.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
32.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
31.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
31.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
29.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
29.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
28.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
27.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
27.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
27.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
27.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
26.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
23.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
18.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
15.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
14.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
14.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC20A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
257.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
93.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
77.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
74.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
70.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
64.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
53.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
52.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
51.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
44.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
44.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
40.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
37.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
36.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
36.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
33.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
33.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
32.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
32.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
30.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
28.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
26.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
24.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
23.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
23.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
21.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
20.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
19.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
19.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
18.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
17.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
17.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
16.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
15.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
15.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
14.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
13.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
12.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
10.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
10.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
10.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
10.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
9.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
8.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
8.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
8.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
7.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
7.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
6.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
6.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
5.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
5.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
5.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
4.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
4.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC20A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
69.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
46.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
42.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
39.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
37.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
36.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
30.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
28.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
28.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
27.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
26.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
26.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
20.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
14.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC20A1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
113.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
107.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
97.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
91.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
83.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
78.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
77.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
74.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
73.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
59.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
58.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
45.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
44.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
44.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
43.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
43.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
43.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
36.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
34.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
33.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
32.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
30.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
30.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
28.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
28.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
27.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
27.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
26.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
24.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
23.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
21.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
17.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
15.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
14.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
12.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
11.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
10.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
10.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
9.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
8.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
8.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
8.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
8.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
7.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
7.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
7.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
7.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
7.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
7.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
7.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
7.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
6.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
6.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
5.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
3.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
