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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RALB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
78.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
57.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
56.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
53.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
52.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
50.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
48.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
46.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
45.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
44.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
42.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
41.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
38.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
38.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
37.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
35.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
34.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
34.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
33.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
30.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
30.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
30.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
29.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
29.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
27.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
27.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
26.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
25.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
25.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
25.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
25.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
25.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
24.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
24.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
24.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
24.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
24.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
23.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
23.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
23.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
22.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
22.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
22.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
22.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
22.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
22.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
21.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
21.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
21.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
21.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
21.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
21.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
21.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
20.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
20.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
20.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
20.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
20.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
20.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
20.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
19.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
19.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
18.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
18.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
18.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
18.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
18.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
18.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
18.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
18.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
17.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
17.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
17.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
17.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
17.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
17.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
17.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
17.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
17.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
17.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
16.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
16.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
16.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
16.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
16.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
16.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
16.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
16.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
16.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
16.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
15.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
15.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
15.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
15.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
15.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
15.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
15.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
15.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
15.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
15.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
15.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
14.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
14.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
14.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
14.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
14.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
14.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
14.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
13.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
13.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
13.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
13.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
13.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
13.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
13.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
13.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
13.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
12.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
12.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
12.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
12.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
12.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
11.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
11.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
11.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
10.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
9.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
9.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
9.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
8.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
8.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
8.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
8.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
7.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RALB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.0
Number of samples
231
Samples
Sample
Description
TPM
DO45307
0 years, female, NA, stage:4, dead, 240 days
79.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
61.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
59.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
59.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
56.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
45.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
43.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
43.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
41.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
38.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
38.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
37.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
36.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
36.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
35.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
34.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
34.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
34.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
33.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
31.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
31.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
29.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
29.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
29.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
29.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
28.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
27.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
26.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
26.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
26.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
25.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
25.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
25.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
25.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
25.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
24.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
24.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
24.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
24.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
23.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
23.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
23.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
23.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
23.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
23.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
23.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
23.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
23.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
22.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
22.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
22.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
22.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
22.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
21.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
21.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
21.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
20.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
20.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
20.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
20.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
20.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
19.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
19.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
19.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
19.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
19.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
19.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
19.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
19.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
19.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
18.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
18.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
18.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
17.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
17.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
17.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
17.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
17.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
17.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
17.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
17.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
17.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
16.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
16.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
16.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
16.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
16.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
16.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
16.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
16.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
15.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
15.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
14.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
14.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
14.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
14.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
13.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
13.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
13.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
13.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
13.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
12.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
12.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
12.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
11.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
10.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
10.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
9.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
9.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
8.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
8.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
7.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
7.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
6.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
227
Tumor
1.1
755
Tumor
0.7
536
Normal
0.6
311
Tumor
0.6
713
Tumor
0.5
686
Normal
0.5
363
Tumor
0.5
954
Normal
0.5
1044
Normal
0.5
636
Normal
0.5
984
Normal
0.5
448
Normal
0.5
1025
Tumor
0.4
778
Normal
0.4
1014
Normal
0.4
917
Tumor
0.4
478
Normal
0.4
131
Tumor
0.4
228
Normal
0.4
745
Tumor
0.4
925
Tumor
0.4
1028
Normal
0.4
412
Normal
0.4
344
Normal
0.4
944
Normal
0.4
915
Tumor
0.4
916
Normal
0.4
744
Normal
0.3
212
Normal
0.3
618
Normal
0.3
571
Tumor
0.3
472
Normal
0.3
498
Normal
0.3
742
Normal
0.3
328
Normal
0.3
938
Normal
0.3
852
Normal
0.3
628
Normal
0.3
364
Normal
0.3
224
Normal
0.3
716
Normal
0.3
926
Normal
0.3
514
Normal
0.3
878
Normal
0.3
1032
Normal
0.3
743
Tumor
0.3
491
Tumor
0.3
824
Normal
0.3
284
Normal
0.3
488
Normal
0.3
723
Tumor
0.3
494
Normal
0.3
922
Normal
0.3
616
Normal
0.3
816
Normal
0.3
981
Tumor
0.3
1041
Tumor
0.3
314
Normal
0.3
1046
Normal
0.3
526
Normal
0.3
447
Tumor
0.3
1022
Normal
0.3
483
Tumor
0.3
728
Normal
0.3
128
Normal
0.3
952
Normal
0.3
967
Tumor
0.3
738
Normal
0.2
286
Normal
0.2
538
Normal
0.2
125
Tumor
0.2
368
Normal
0.2
356
Normal
0.2
524
Normal
0.2
528
Normal
0.2
937
Tumor
0.2
924
Normal
0.2
685
Tumor
0.2
866
Normal
0.2
721
Tumor
0.2
914
Normal
0.2
342
Normal
0.2
534
Normal
0.2
912
Normal
0.2
918
Normal
0.2
627
Tumor
0.2
884
Normal
0.2
492
Normal
0.2
533
Tumor
0.2
1042
Normal
0.2
426
Normal
0.2
416
Normal
0.2
978
Normal
0.2
672
Normal
0.2
722
Normal
0.2
432
Normal
0.2
968
Normal
0.2
414
Normal
0.2
482
Normal
0.2
642
Normal
0.2
786
Normal
0.2
192
Normal
0.2
481
Tumor
0.2
558
Normal
0.2
696
Normal
0.2
955
Tumor
0.2
568
Normal
0.2
714
Normal
0.2
851
Tumor
0.2
196
Normal
0.2
484
Normal
0.2
546
Normal
0.2
278
Normal
0.2
756
Normal
0.2
715
Tumor
0.2
617
Tumor
0.2
298
Normal
0.2
862
Normal
0.2
697
Tumor
0.2
958
Normal
0.2
698
Normal
0.2
142
Normal
0.2
376
Normal
0.2
1026
Normal
0.2
362
Normal
0.2
312
Normal
0.2
882
Normal
0.2
554
Normal
0.2
976
Normal
0.2
956
Normal
0.2
982
Normal
0.2
332
Normal
0.2
456
Normal
0.1
572
Normal
0.1
671
Tumor
0.1
518
Normal
0.1
477
Tumor
0.1
648
Normal
0.1
452
Normal
0.1
471
Tumor
0.1
864
Normal
0.1
462
Normal
0.1
564
Normal
0.1
428
Normal
0.1
746
Normal
0.1
468
Normal
0.1
352
Normal
0.1
818
Normal
0.1
1016
Normal
0.1
1015
Tumor
0.1
272
Normal
0.1
435
Tumor
0.1
444
Normal
0.1
172
Normal
0.1
146
Normal
0.1
874
Normal
0.1
446
Normal
0.1
535
Tumor
0.1
966
Normal
0.1
1045
Tumor
0.1
474
Normal
0.1
516
Normal
0.1
114
Normal
0.1
868
Normal
0.1
964
Normal
0.1
664
Normal
0.1
214
Normal
0.1
665
Tumor
0.1
388
Normal
0.1
1031
Tumor
0.1
186
Normal
0.1
724
Normal
0.1
813
Tumor
0.1
261
Tumor
0.1
422
Normal
0.1
415
Tumor
0.1
222
Normal
0.1
666
Normal
0.1
394
Normal
0.1
741
Tumor
0.1
455
Tumor
0.1
873
Tumor
0.1
126
Normal
0.1
218
Normal
0.1
283
Tumor
0.1
136
Normal
0.1
384
Normal
0.1
436
Normal
0.1
148
Normal
0.1
262
Normal
0.1
188
Normal
0.1
923
Tumor
0.1
258
Normal
0.1
1043
Tumor
0.1
487
Tumor
0.1
662
Normal
0.1
386
Normal
0.0
424
Normal
0.0
232
Normal
0.0
815
Tumor
0.0
132
Normal
0.0
138
Normal
0.0
434
Normal
0.0
537
Tumor
0.0
858
Normal
0.0
466
Normal
0.0
111
Normal
0.0
464
Normal
0.0
343
Tumor
0.0
354
Normal
0.0
913
Tumor
0.0
358
Normal
0.0
396
Normal
0.0
881
Tumor
0.0
817
Tumor
0.0
162
Normal
0.0
553
Tumor
0.0
366
Normal
0.0
297
Tumor
0.0
137
Tumor
0.0
814
Normal
0.0
635
Tumor
0.0
574
Normal
0.0
785
Tumor
0.0
823
Tumor
0.0
527
Tumor
0.0
1027
Tumor
0.0
867
Tumor
0.0
392
Normal
0.0
615
Tumor
0.0
268
Normal
0.0
983
Tumor
0.0
953
Tumor
0.0
124
Normal
0.0
515
Tumor
0.0
145
Tumor
0.0
523
Tumor
0.0
957
Tumor
0.0
257
Tumor
0.0
327
Tumor
0.0
217
Tumor
0.0
191
Tumor
0.0
975
Tumor
0.0
1013
Tumor
-0.1
921
Tumor
-0.1
433
Tumor
-0.1
727
Tumor
-0.1
861
Tumor
-0.1
573
Tumor
-0.1
187
Tumor
-0.1
545
Tumor
-0.1
563
Tumor
-0.1
425
Tumor
-0.1
737
Tumor
-0.1
331
Tumor
-0.1
557
Tumor
-0.1
127
Tumor
-0.1
877
Tumor
-0.1
857
Tumor
-0.1
647
Tumor
-0.1
977
Tumor
-0.1
423
Tumor
-0.1
513
Tumor
-0.1
943
Tumor
-0.1
525
Tumor
-0.1
465
Tumor
-0.1
411
Tumor
-0.1
493
Tumor
-0.1
451
Tumor
-0.1
195
Tumor
-0.2
467
Tumor
-0.2
421
Tumor
-0.2
367
Tumor
-0.2
461
Tumor
-0.2
223
Tumor
-0.2
355
Tumor
-0.2
185
Tumor
-0.2
443
Tumor
-0.2
641
Tumor
-0.2
445
Tumor
-0.2
385
Tumor
-0.2
963
Tumor
-0.2
313
Tumor
-0.2
211
Tumor
-0.2
271
Tumor
-0.2
213
Tumor
-0.2
341
Tumor
-0.2
353
Tumor
-0.2
695
Tumor
-0.2
395
Tumor
-0.2
135
Tumor
-0.2
567
Tumor
-0.3
113
Tumor
-0.3
863
Tumor
-0.3
777
Tumor
-0.3
517
Tumor
-0.3
221
Tumor
-0.3
365
Tumor
-0.3
911
Tumor
-0.3
391
Tumor
-0.3
147
Tumor
-0.3
1021
Tumor
-0.4
393
Tumor
-0.4
285
Tumor
-0.4
431
Tumor
-0.4
383
Tumor
-0.4
357
Tumor
-0.4
951
Tumor
-0.4
171
Tumor
-0.4
497
Tumor
-0.4
361
Tumor
-0.4
387
Tumor
-0.4
375
Tumor
-0.4
161
Tumor
-0.4
463
Tumor
-0.4
965
Tumor
-0.4
351
Tumor
-0.5
883
Tumor
-0.5
277
Tumor
-0.5
141
Tumor
-0.5
427
Tumor
-0.5
123
Tumor
-0.6
663
Tumor
-0.6
112
Tumor
-0.6
231
Tumor
-0.6
413
Tumor
-0.6
661
Tumor
-0.6
267
Tumor
-0.7
473
Tumor
-0.7
865
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.