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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.2
nTPM
HPA Brain:
54.0
nTPM
GTEx:
11.2
nTPM
FANTOM5:
17.1
Scaled Tags Per Million
Pig:
22.8
nTPM
Mouse:
16.5
nTPM
Allen mouse:
1.7
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.0
Sample id
Sample description
nTPM
Amygdala nTPM: 34.8
2517
Female, age 94, left hemisphere
46.2
2514
Male, age 75, right hemisphere
37.7
2695
Female, age 67, right hemisphere
32.6
1987
Female, age 91, left hemisphere
31.5
2814
Male, age 76, right hemisphere
26.2
Basal amygdala nTPM: 52.9
2827
Female, age 67, right hemisphere
80.2
1955
Male, age 76, both hemispheres
61.9
2685
Female, age 94, left hemisphere
60.0
2609
Male, age 75, right hemisphere
49.2
2110
Male, age 80, left hemisphere
40.2
2243
Female, age 91, right hemisphere
25.5
Central amygdala nTPM: 46.2
2826
Female, age 94, left hemisphere
95.9
2239
Male, age 80, left hemisphere
53.8
2515
Male, age 75, right hemisphere
31.2
2701
Female, age 91, right hemisphere
27.8
1905
Male, age 76, both hemispheres
22.5
Corticomedial amygdala nTPM: 51.5
2535
Female, age 67, right hemisphere
78.6
2429
Female, age 94, left hemisphere
66.0
2240
Male, age 76, both hemispheres
52.4
2428
Male, age 75, right hemisphere
40.9
2829
Male, age 80, left hemisphere
35.6
2242
Female, age 91, right hemisphere
35.5
Lateral amygdala nTPM: 54.0
2534
Female, age 94, left hemisphere
95.3
2256
Male, age 80, left hemisphere
58.4
2830
Female, age 67, right hemisphere
53.7
2516
Male, age 75, right hemisphere
43.9
2255
Female, age 91, right hemisphere
39.6
1883
Male, age 76, both hemispheres
33.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 11.2
Samples: 152
Max nTPM: 53.5
Min nTPM: 0.9
Std nTPM: 7.5
Median nTPM: 9.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
53.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
43.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
36.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
31.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
30.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
28.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
26.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
25.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
24.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
24.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
23.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
21.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
21.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
20.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
19.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
18.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
17.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
17.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
17.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
16.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
16.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
16.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
16.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
16.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
16.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
15.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
15.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
15.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
14.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
14.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
14.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
14.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
14.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
14.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
13.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
13.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
13.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
13.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
13.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
13.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
13.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
12.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
12.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
12.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
12.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
12.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
12.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
12.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
12.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
11.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
11.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
11.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
11.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
11.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
11.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
11.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
11.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
11.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
11.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
11.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
11.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
11.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
11.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
10.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
10.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
10.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
10.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
10.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
10.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
10.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
10.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
10.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
10.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
9.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
9.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
9.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
9.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
9.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
9.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
9.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
9.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
9.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
9.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
9.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
9.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
9.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
9.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
9.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
8.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
8.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
8.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
8.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
8.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
8.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
8.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
7.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
7.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
7.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
7.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
7.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
7.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
7.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
7.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
7.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
7.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
7.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
7.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
7.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
7.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
7.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
7.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
6.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
6.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
6.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
6.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
6.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
6.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
6.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
6.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
6.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
6.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
6.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
6.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
6.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
6.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
6.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
5.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
5.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
5.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
4.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
4.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
4.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
4.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
4.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
4.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
4.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
4.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
4.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
4.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
3.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
3.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
3.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
3.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
2.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
2.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
2.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
2.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
2.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
2.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
2.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
0.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
16.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 16.5
Samples: 4
Max nTPM: 17.3
Min nTPM: 15.6
Sample A
Male
16.6
Sample B
Male
16.6
Sample C
Female
15.6
Sample D
Female
17.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
