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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS27A is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
866.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2941.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2743.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2725.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2575.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2174.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2166.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2160.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2065.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2064.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2020.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2011.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1907.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1901.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1875.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1871.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1867.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1859.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1856.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1848.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1829.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1805.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1804.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1797.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1778.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1740.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1731.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1703.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1691.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1688.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
1658.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1623.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1603.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1568.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1564.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1538.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1537.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1522.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1498.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1484.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1478.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1475.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1449.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1416.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1403.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1403.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1398.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1391.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1374.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1356.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1336.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1333.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1313.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1311.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1309.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1295.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1294.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1268.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1261.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1256.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1254.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1240.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1230.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1210.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1208.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1208.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1203.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1194.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1184.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1178.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1164.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1159.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1155.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1148.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1124.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1121.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1120.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
1095.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1092.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1090.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1088.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1085.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1073.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1070.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1069.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1069.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1068.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1064.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1058.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1058.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1055.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1050.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1049.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1045.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1043.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1038.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1036.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1022.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1015.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1015.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1014.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1014.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1009.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1009.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1006.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
998.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
990.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
988.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
984.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
982.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
980.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
977.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
977.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
977.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
973.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
965.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
954.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
952.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
944.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
943.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
942.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
937.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
923.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
916.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
912.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
908.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
906.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
906.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
905.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
904.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
896.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
895.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
892.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
889.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
888.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
887.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
887.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
873.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
866.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
865.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
864.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
863.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
860.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
846.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
845.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
831.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
829.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
829.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
825.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
820.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
813.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
813.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
813.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
802.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
788.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
786.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
784.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
784.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
783.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
781.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
773.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
770.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
766.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
765.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
763.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
762.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
760.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
759.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
757.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
754.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
753.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
752.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
751.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
750.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
749.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
749.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
747.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
740.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
739.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
737.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
737.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
736.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
735.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
733.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
730.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
727.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
725.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
722.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
720.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
720.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
718.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
718.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
712.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
711.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
701.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
701.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
699.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
698.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
695.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
692.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
691.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
685.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
684.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
680.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
678.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
676.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
667.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
665.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
663.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
662.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
660.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
658.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
655.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
655.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
651.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
650.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
646.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
646.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
645.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
643.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
640.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
639.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
638.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
636.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
634.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
634.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
633.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
629.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
624.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
624.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
624.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
620.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
618.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
615.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
610.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
610.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
605.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
605.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
603.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
602.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
602.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
601.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
601.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
600.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
599.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
599.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
597.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
596.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
594.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
594.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
591.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
588.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
588.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
588.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
587.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
586.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
584.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
577.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
576.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
575.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
573.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
572.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
570.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
570.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
569.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
568.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
567.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
565.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
562.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
562.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
561.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
561.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
560.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
557.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
555.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
554.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
554.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
553.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
545.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
545.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
543.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
542.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
541.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
536.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
531.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
528.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
523.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
522.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
519.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
517.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
511.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
509.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
503.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
503.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
502.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
499.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
495.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
495.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
492.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
492.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
491.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
489.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
486.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
483.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
483.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
481.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
481.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
480.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
480.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
477.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
477.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
475.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
475.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
474.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
471.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
467.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
467.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
464.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
463.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
457.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
456.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
453.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
446.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
443.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
435.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
428.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
427.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
427.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
427.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
426.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
426.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
424.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
422.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
418.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
416.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
413.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
411.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
408.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
408.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
405.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
397.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
390.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
383.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
378.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
374.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
366.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
361.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
350.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
348.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
348.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
343.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
342.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
341.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
335.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
334.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
328.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
327.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
317.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
317.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
316.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
256.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
254.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS27A is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
740.4
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
3545.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
2715.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
2163.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
1954.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1884.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
1774.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
1758.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1748.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
1708.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
1546.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
1420.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
1416.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
1393.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1368.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
1320.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
1316.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
1303.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
1281.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
1247.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
1217.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
1203.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1186.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
1183.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1163.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
1159.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
1156.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
1136.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
1131.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
1129.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
1128.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
1102.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
1102.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1090.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
1088.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
1087.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
1081.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1062.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1050.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
1042.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
1035.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
1034.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
1029.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
1024.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1022.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1022.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
1010.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
1006.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
992.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
985.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
984.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
983.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
981.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
976.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
969.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
966.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
953.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
952.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
948.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
947.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
945.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
944.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
937.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
937.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
930.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
929.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
920.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
915.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
913.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
907.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
904.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
894.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
885.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
880.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
873.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
868.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
864.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
846.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
845.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
845.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
841.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
831.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
818.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
818.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
807.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
801.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
790.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
790.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
789.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
785.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
783.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
776.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
771.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
770.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
762.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
752.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
748.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
738.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
731.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
726.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
724.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
722.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
719.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
714.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
714.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
713.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
711.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
697.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
695.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
667.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
666.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
666.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
662.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
659.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
653.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
646.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
639.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
638.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
635.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
631.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
623.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
618.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
617.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
616.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
610.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
600.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
596.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
594.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
594.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
583.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
579.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
576.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
574.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
571.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
570.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
570.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
569.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
564.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
554.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
553.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
551.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
551.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
551.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
548.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
547.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
539.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
533.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
520.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
520.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
517.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
515.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
510.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
508.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
506.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
498.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
498.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
494.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
492.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
490.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
489.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
489.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
488.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
487.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
486.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
483.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
482.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
479.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
473.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
469.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
468.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
462.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
454.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
454.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
454.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
451.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
451.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
448.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
447.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
443.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
439.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
434.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
432.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
427.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
425.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
422.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
415.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
414.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
413.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
412.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
401.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
391.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
381.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
381.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
378.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
378.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
377.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
376.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
373.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
372.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
372.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
367.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
366.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
364.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
357.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
356.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
356.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
354.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
348.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
346.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
346.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
331.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
326.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
318.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
311.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
310.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
304.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
300.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
294.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
289.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
286.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
277.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
273.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
271.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
269.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
268.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
233.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
204.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
191.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
159.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
159.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
145.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
134.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
913
Tumor
1.5
1041
Tumor
1.0
911
Tumor
0.9
533
Tumor
0.8
145
Tumor
0.7
1045
Tumor
0.6
131
Tumor
0.5
525
Tumor
0.5
1025
Tumor
0.4
857
Tumor
0.4
267
Tumor
0.4
415
Tumor
0.4
473
Tumor
0.3
537
Tumor
0.3
427
Tumor
0.3
478
Normal
0.3
471
Tumor
0.3
545
Tumor
0.3
1031
Tumor
0.3
553
Tumor
0.3
497
Tumor
0.3
937
Tumor
0.3
523
Tumor
0.3
873
Tumor
0.3
554
Normal
0.3
865
Tumor
0.2
951
Tumor
0.2
965
Tumor
0.2
921
Tumor
0.2
524
Normal
0.2
191
Tumor
0.2
477
Tumor
0.2
1021
Tumor
0.2
823
Tumor
0.2
917
Tumor
0.2
355
Tumor
0.2
915
Tumor
0.2
1027
Tumor
0.2
538
Normal
0.2
211
Tumor
0.2
1043
Tumor
0.2
535
Tumor
0.2
695
Tumor
0.2
412
Normal
0.2
926
Normal
0.2
977
Tumor
0.2
123
Tumor
0.2
483
Tumor
0.2
958
Normal
0.2
1046
Normal
0.2
964
Normal
0.1
536
Normal
0.1
534
Normal
0.1
955
Tumor
0.1
861
Tumor
0.1
698
Normal
0.1
1044
Normal
0.1
925
Tumor
0.1
498
Normal
0.1
975
Tumor
0.1
1013
Tumor
0.1
527
Tumor
0.1
493
Tumor
0.1
952
Normal
0.1
356
Normal
0.1
715
Tumor
0.1
957
Tumor
0.1
745
Tumor
0.1
223
Tumor
0.1
685
Tumor
0.1
966
Normal
0.1
488
Normal
0.1
492
Normal
0.1
481
Tumor
0.1
923
Tumor
0.1
515
Tumor
0.1
983
Tumor
0.1
737
Tumor
0.1
697
Tumor
0.1
912
Normal
0.1
714
Normal
0.1
981
Tumor
0.1
484
Normal
0.1
1032
Normal
0.1
967
Tumor
0.1
884
Normal
0.1
517
Tumor
0.1
487
Tumor
0.1
514
Normal
0.1
756
Normal
0.1
746
Normal
0.1
363
Tumor
0.1
482
Normal
0.1
858
Normal
0.1
963
Tumor
0.1
817
Tumor
0.1
261
Tumor
0.1
1026
Normal
0.1
818
Normal
0.1
777
Tumor
0.1
328
Normal
0.1
472
Normal
0.1
722
Normal
0.1
882
Normal
0.1
285
Tumor
0.1
878
Normal
0.1
518
Normal
0.1
494
Normal
0.1
922
Normal
0.1
462
Normal
0.1
976
Normal
0.1
364
Normal
0.0
721
Tumor
0.0
557
Tumor
0.0
212
Normal
0.0
546
Normal
0.0
411
Tumor
0.0
516
Normal
0.0
744
Normal
0.0
227
Tumor
0.0
1022
Normal
0.0
716
Normal
0.0
755
Tumor
0.0
696
Normal
0.0
824
Normal
0.0
968
Normal
0.0
686
Normal
0.0
924
Normal
0.0
984
Normal
0.0
938
Normal
0.0
385
Tumor
0.0
914
Normal
0.0
1014
Normal
0.0
513
Tumor
0.0
1028
Normal
0.0
723
Tumor
0.0
474
Normal
0.0
866
Normal
0.0
327
Tumor
0.0
416
Normal
0.0
743
Tumor
0.0
883
Tumor
0.0
135
Tumor
0.0
1042
Normal
0.0
916
Normal
0.0
137
Tumor
0.0
816
Normal
0.0
224
Normal
0.0
461
Tumor
0.0
425
Tumor
0.0
142
Normal
0.0
528
Normal
0.0
431
Tumor
0.0
778
Normal
0.0
526
Normal
0.0
862
Normal
0.0
727
Tumor
0.0
147
Tumor
0.0
918
Normal
0.0
956
Normal
0.0
954
Normal
0.0
221
Tumor
0.0
663
Tumor
0.0
1015
Tumor
0.0
944
Normal
0.0
616
Normal
0.0
738
Normal
0.0
852
Normal
0.0
283
Tumor
0.0
286
Normal
0.0
448
Normal
0.0
978
Normal
0.0
128
Normal
0.0
146
Normal
0.0
786
Normal
0.0
376
Normal
0.0
572
Normal
0.0
271
Tumor
0.0
228
Normal
-0.1
874
Normal
-0.1
141
Tumor
-0.1
375
Tumor
-0.1
284
Normal
-0.1
867
Tumor
-0.1
864
Normal
-0.1
863
Tumor
-0.1
617
Tumor
-0.1
881
Tumor
-0.1
728
Normal
-0.1
558
Normal
-0.1
1016
Normal
-0.1
785
Tumor
-0.1
713
Tumor
-0.1
982
Normal
-0.1
742
Normal
-0.1
298
Normal
-0.1
741
Tumor
-0.1
455
Tumor
-0.1
277
Tumor
-0.1
851
Tumor
-0.1
868
Normal
-0.1
647
Tumor
-0.1
214
Normal
-0.1
351
Tumor
-0.1
447
Tumor
-0.1
815
Tumor
-0.1
395
Tumor
-0.1
466
Normal
-0.1
312
Normal
-0.1
342
Normal
-0.1
943
Tumor
-0.1
185
Tumor
-0.1
138
Normal
-0.2
218
Normal
-0.2
465
Tumor
-0.2
196
Normal
-0.2
953
Tumor
-0.2
443
Tumor
-0.2
724
Normal
-0.2
136
Normal
-0.2
387
Tumor
-0.2
187
Tumor
-0.2
111
Normal
-0.2
352
Normal
-0.2
272
Normal
-0.2
113
Tumor
-0.2
392
Normal
-0.2
362
Normal
-0.2
186
Normal
-0.2
257
Tumor
-0.2
573
Tumor
-0.2
386
Normal
-0.2
422
Normal
-0.2
192
Normal
-0.2
384
Normal
-0.2
222
Normal
-0.2
171
Tumor
-0.2
428
Normal
-0.2
366
Normal
-0.2
262
Normal
-0.2
258
Normal
-0.2
877
Tumor
-0.2
396
Normal
-0.2
344
Normal
-0.2
132
Normal
-0.2
311
Tumor
-0.2
278
Normal
-0.2
563
Tumor
-0.2
648
Normal
-0.2
664
Normal
-0.2
161
Tumor
-0.2
213
Tumor
-0.2
628
Normal
-0.2
114
Normal
-0.2
445
Tumor
-0.2
162
Normal
-0.2
436
Normal
-0.2
426
Normal
-0.2
368
Normal
-0.2
172
Normal
-0.2
217
Tumor
-0.2
126
Normal
-0.2
464
Normal
-0.2
661
Tumor
-0.2
467
Tumor
-0.2
353
Tumor
-0.2
564
Normal
-0.2
567
Tumor
-0.2
424
Normal
-0.3
452
Normal
-0.3
414
Normal
-0.3
367
Tumor
-0.3
365
Tumor
-0.3
297
Tumor
-0.3
568
Normal
-0.3
148
Normal
-0.3
332
Normal
-0.3
354
Normal
-0.3
814
Normal
-0.3
188
Normal
-0.3
491
Tumor
-0.3
361
Tumor
-0.3
444
Normal
-0.3
232
Normal
-0.3
456
Normal
-0.3
463
Tumor
-0.3
343
Tumor
-0.3
393
Tumor
-0.3
394
Normal
-0.3
112
Tumor
-0.3
574
Normal
-0.3
231
Tumor
-0.3
468
Normal
-0.3
388
Normal
-0.3
358
Normal
-0.3
391
Tumor
-0.3
618
Normal
-0.3
268
Normal
-0.3
451
Tumor
-0.3
124
Normal
-0.3
357
Tumor
-0.3
432
Normal
-0.3
662
Normal
-0.3
615
Tumor
-0.3
813
Tumor
-0.3
423
Tumor
-0.3
433
Tumor
-0.3
435
Tumor
-0.3
421
Tumor
-0.3
666
Normal
-0.3
636
Normal
-0.4
434
Normal
-0.4
314
Normal
-0.4
635
Tumor
-0.4
672
Normal
-0.4
313
Tumor
-0.4
195
Tumor
-0.4
383
Tumor
-0.4
127
Tumor
-0.4
665
Tumor
-0.4
341
Tumor
-0.4
641
Tumor
-0.4
413
Tumor
-0.4
571
Tumor
-0.4
331
Tumor
-0.4
446
Normal
-0.4
125
Tumor
-0.5
642
Normal
-0.5
671
Tumor
-0.6
627
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.