We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1orf35 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
45.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
45.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
44.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
35.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
34.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
34.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
32.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
31.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
30.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
30.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
29.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
28.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
27.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
27.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
27.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
26.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
26.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
26.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
26.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
26.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
25.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
25.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
25.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
25.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
25.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
25.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
25.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
25.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
25.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
25.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
24.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
24.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
23.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
23.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
23.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
23.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
23.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
23.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
22.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
22.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
22.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
22.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
22.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
21.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
21.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
21.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
21.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
21.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
20.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
20.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
20.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
20.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
19.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
19.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
19.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
19.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
19.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
18.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
18.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
18.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
18.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
18.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
18.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
18.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
18.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
17.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
17.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
17.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
17.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
17.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
17.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
17.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
17.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
17.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
17.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
16.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
16.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
16.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
16.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
16.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
16.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
16.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
16.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
16.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
16.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
16.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
16.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
16.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
16.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
16.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
16.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
15.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
15.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
15.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
15.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
15.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
14.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
14.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
14.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
14.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
14.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
14.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
14.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
14.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
13.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
13.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
13.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
13.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
13.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
13.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
13.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
13.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
13.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
13.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
12.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
12.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
12.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
12.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
12.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
12.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
12.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
12.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
12.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
11.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
11.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
11.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
11.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
11.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
10.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
10.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
10.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
10.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
9.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
9.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
9.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
9.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
8.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
8.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
7.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
7.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
7.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
6.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
6.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
5.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
4.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
4.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
4.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1orf35 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.4
Number of samples
231
Samples
Sample
Description
TPM
DO48747
0 years, male, NA, stage:3, alive, 540 days
44.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
44.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
42.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
39.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
36.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
36.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
33.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
31.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
31.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
31.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
31.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
30.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
29.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
29.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
29.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
29.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
28.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
28.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
27.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
27.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
26.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
25.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
24.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
23.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
22.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
22.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
22.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
22.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
22.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
22.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
22.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
21.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
21.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
21.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
21.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
21.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
20.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
20.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
20.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
20.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
20.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
20.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
19.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
19.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
19.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
19.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
18.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
18.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
18.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
18.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
18.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
18.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
17.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
17.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
17.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
17.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
17.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
17.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
16.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
16.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
16.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
16.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
16.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
16.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
15.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
15.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
15.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
14.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
14.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
14.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
14.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
14.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
13.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
13.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
13.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
13.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
13.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
13.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
12.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
12.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
12.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
11.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
11.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
11.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
11.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
11.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
10.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
10.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
10.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
9.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
9.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
8.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
7.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
7.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
5.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
3.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
3.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
2.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
2.0
1013
Tumor
1.7
977
Tumor
1.5
131
Tumor
1.5
533
Tumor
1.4
865
Tumor
1.3
951
Tumor
1.3
817
Tumor
1.3
641
Tumor
1.3
523
Tumor
1.3
881
Tumor
1.2
221
Tumor
1.2
553
Tumor
1.2
647
Tumor
1.1
473
Tumor
1.1
411
Tumor
1.1
1021
Tumor
1.1
965
Tumor
1.1
975
Tumor
1.1
1031
Tumor
1.1
351
Tumor
1.1
525
Tumor
1.0
573
Tumor
1.0
517
Tumor
1.0
313
Tumor
1.0
777
Tumor
1.0
277
Tumor
1.0
271
Tumor
1.0
213
Tumor
1.0
357
Tumor
0.9
957
Tumor
0.9
877
Tumor
0.9
471
Tumor
0.9
724
Normal
0.9
685
Tumor
0.9
661
Tumor
0.9
557
Tumor
0.9
445
Tumor
0.9
497
Tumor
0.8
737
Tumor
0.8
741
Tumor
0.8
635
Tumor
0.8
211
Tumor
0.8
123
Tumor
0.7
715
Tumor
0.7
663
Tumor
0.7
671
Tumor
0.7
923
Tumor
0.7
385
Tumor
0.7
911
Tumor
0.6
147
Tumor
0.6
483
Tumor
0.6
813
Tumor
0.6
571
Tumor
0.6
283
Tumor
0.6
331
Tumor
0.6
297
Tumor
0.6
515
Tumor
0.6
665
Tumor
0.6
567
Tumor
0.6
1025
Tumor
0.6
425
Tumor
0.6
921
Tumor
0.5
285
Tumor
0.5
493
Tumor
0.5
527
Tumor
0.5
171
Tumor
0.5
537
Tumor
0.5
463
Tumor
0.5
883
Tumor
0.5
863
Tumor
0.5
1041
Tumor
0.5
227
Tumor
0.5
943
Tumor
0.5
963
Tumor
0.5
393
Tumor
0.5
343
Tumor
0.4
355
Tumor
0.4
413
Tumor
0.4
375
Tumor
0.4
823
Tumor
0.4
695
Tumor
0.4
697
Tumor
0.4
535
Tumor
0.4
545
Tumor
0.4
191
Tumor
0.4
967
Tumor
0.4
867
Tumor
0.3
112
Tumor
0.3
231
Tumor
0.3
431
Tumor
0.3
727
Tumor
0.3
257
Tumor
0.3
361
Tumor
0.3
983
Tumor
0.3
267
Tumor
0.3
814
Normal
0.3
125
Tumor
0.3
217
Tumor
0.3
141
Tumor
0.3
187
Tumor
0.3
721
Tumor
0.2
953
Tumor
0.2
785
Tumor
0.2
427
Tumor
0.2
873
Tumor
0.2
513
Tumor
0.2
857
Tumor
0.2
443
Tumor
0.2
395
Tumor
0.2
477
Tumor
0.2
461
Tumor
0.2
185
Tumor
0.2
387
Tumor
0.1
465
Tumor
0.1
1027
Tumor
0.1
1015
Tumor
0.1
861
Tumor
0.1
937
Tumor
0.1
467
Tumor
0.1
755
Tumor
0.1
447
Tumor
0.1
455
Tumor
0.1
481
Tumor
0.1
615
Tumor
0.0
435
Tumor
0.0
365
Tumor
0.0
161
Tumor
0.0
135
Tumor
0.0
423
Tumor
0.0
433
Tumor
0.0
915
Tumor
0.0
415
Tumor
0.0
363
Tumor
0.0
487
Tumor
0.0
383
Tumor
0.0
451
Tumor
0.0
491
Tumor
0.0
192
Normal
0.0
327
Tumor
0.0
261
Tumor
0.0
913
Tumor
-0.1
391
Tumor
-0.1
745
Tumor
-0.1
925
Tumor
-0.1
662
Normal
-0.1
746
Normal
-0.1
744
Normal
-0.1
917
Tumor
-0.2
472
Normal
-0.2
851
Tumor
-0.2
478
Normal
-0.2
195
Tumor
-0.2
223
Tumor
-0.2
127
Tumor
-0.2
563
Tumor
-0.2
558
Normal
-0.2
666
Normal
-0.2
546
Normal
-0.2
416
Normal
-0.2
488
Normal
-0.2
436
Normal
-0.2
713
Tumor
-0.2
356
Normal
-0.2
145
Tumor
-0.2
1043
Tumor
-0.2
311
Tumor
-0.2
984
Normal
-0.2
474
Normal
-0.2
1045
Tumor
-0.2
636
Normal
-0.2
446
Normal
-0.2
958
Normal
-0.2
494
Normal
-0.3
498
Normal
-0.3
554
Normal
-0.3
627
Tumor
-0.3
312
Normal
-0.3
815
Tumor
-0.3
572
Normal
-0.3
328
Normal
-0.3
978
Normal
-0.3
866
Normal
-0.3
367
Tumor
-0.3
456
Normal
-0.3
137
Tumor
-0.3
342
Normal
-0.3
574
Normal
-0.3
258
Normal
-0.3
538
Normal
-0.3
534
Normal
-0.3
952
Normal
-0.3
714
Normal
-0.3
981
Tumor
-0.3
536
Normal
-0.3
968
Normal
-0.3
878
Normal
-0.3
966
Normal
-0.3
142
Normal
-0.3
432
Normal
-0.3
1026
Normal
-0.3
362
Normal
-0.3
188
Normal
-0.3
938
Normal
-0.3
364
Normal
-0.3
412
Normal
-0.3
224
Normal
-0.3
341
Tumor
-0.4
113
Tumor
-0.4
1022
Normal
-0.4
955
Tumor
-0.4
484
Normal
-0.4
186
Normal
-0.4
421
Tumor
-0.4
568
Normal
-0.4
232
Normal
-0.4
742
Normal
-0.4
268
Normal
-0.4
1014
Normal
-0.4
716
Normal
-0.4
1016
Normal
-0.4
524
Normal
-0.4
918
Normal
-0.4
146
Normal
-0.4
132
Normal
-0.4
672
Normal
-0.4
376
Normal
-0.4
434
Normal
-0.4
136
Normal
-0.4
386
Normal
-0.4
976
Normal
-0.4
862
Normal
-0.4
366
Normal
-0.4
228
Normal
-0.4
1032
Normal
-0.4
664
Normal
-0.4
926
Normal
-0.4
388
Normal
-0.4
628
Normal
-0.4
426
Normal
-0.4
528
Normal
-0.4
444
Normal
-0.4
222
Normal
-0.4
924
Normal
-0.4
272
Normal
-0.4
864
Normal
-0.4
162
Normal
-0.4
262
Normal
-0.4
148
Normal
-0.4
874
Normal
-0.4
384
Normal
-0.4
728
Normal
-0.4
126
Normal
-0.4
956
Normal
-0.4
982
Normal
-0.4
464
Normal
-0.4
462
Normal
-0.4
138
Normal
-0.4
916
Normal
-0.4
492
Normal
-0.4
396
Normal
-0.4
368
Normal
-0.4
618
Normal
-0.5
686
Normal
-0.5
1028
Normal
-0.5
172
Normal
-0.5
214
Normal
-0.5
314
Normal
-0.5
964
Normal
-0.5
642
Normal
-0.5
482
Normal
-0.5
298
Normal
-0.5
278
Normal
-0.5
564
Normal
-0.5
617
Tumor
-0.5
516
Normal
-0.5
218
Normal
-0.5
422
Normal
-0.5
884
Normal
-0.5
786
Normal
-0.5
354
Normal
-0.5
722
Normal
-0.5
111
Normal
-0.5
514
Normal
-0.5
196
Normal
-0.5
954
Normal
-0.5
944
Normal
-0.5
696
Normal
-0.5
466
Normal
-0.5
286
Normal
-0.5
124
Normal
-0.5
114
Normal
-0.5
212
Normal
-0.5
414
Normal
-0.5
756
Normal
-0.5
922
Normal
-0.5
1046
Normal
-0.5
778
Normal
-0.6
394
Normal
-0.6
648
Normal
-0.6
452
Normal
-0.6
468
Normal
-0.6
353
Tumor
-0.6
723
Tumor
-0.6
914
Normal
-0.6
428
Normal
-0.6
448
Normal
-0.6
284
Normal
-0.6
352
Normal
-0.6
882
Normal
-0.6
526
Normal
-0.6
738
Normal
-0.6
616
Normal
-0.6
332
Normal
-0.6
344
Normal
-0.6
698
Normal
-0.6
1042
Normal
-0.6
518
Normal
-0.6
128
Normal
-0.6
1044
Normal
-0.6
816
Normal
-0.6
392
Normal
-0.6
868
Normal
-0.7
912
Normal
-0.7
424
Normal
-0.7
358
Normal
-0.7
852
Normal
-0.8
818
Normal
-0.8
824
Normal
-0.9
858
Normal
-1.0
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
