HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.1 nTPM
HPA Brain:38.3 nTPM
GTEx:37.1 nTPM
FANTOM5:66.9 Scaled Tags Per Million
Pig:60.0 nTPM
Mouse:122.4 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.8
1898 Male, age 80, left hemisphere 43.3
1855 Male, age 76, left hemisphere 37.7
2621 Female, age 67, right hemisphere 36.0
1911 Female, age 85, right hemisphere 33.8
2148 Female, age 91, left hemisphere 29.4
2529 Female, age 94, left hemisphere 28.3
Dentate gyrus
nTPM: 35.1
2010 Male, age 76, both hemispheres 44.4
2530 Female, age 94, left hemisphere 37.4
2246 Female, age 85, both hemispheres 35.7
1927 Female, age 91, both hemispheres 34.1
2528 Male, age 74, both hemispheres 34.1
2531 Female, age 67, both hemispheres 24.7
Entorhinal gyrus
nTPM: 33.6
1938 Female, age 85, left hemisphere 38.0
2117 Female, age 91, right hemisphere 38.0
2613 Female, age 94, left hemisphere 34.0
2764 Male, age 80, right hemisphere 33.5
1787 Male, age 76, left hemisphere 32.9
2686 Male, age 75, right hemisphere 25.4
Hippocampus, CA1
nTPM: 38.3
2749 Male, age 80, left hemisphere 48.8
1873 Female, age 85, both hemispheres 39.7
2527 Male, age 74, both hemispheres 35.8
2045 Male, age 76, both hemispheres 35.4
2082 Female, age 91, right hemisphere 31.9
Hippocampus, CA2
nTPM: 37.2
1892 Male, age 76, both hemispheres 41.4
2249 Male, age 74, both hemispheres 41.3
1963 Male, age 80, left hemisphere 39.4
1940 Female, age 85, left hemisphere 35.7
2113 Female, age 91, right hemisphere 33.7
2437 Female, age 94, left hemisphere 31.9
Hippocampus, CA3
nTPM: 36.3
2436 Male, age 74, both hemispheres 42.7
1867 Male, age 76, both hemispheres 42.6
2137 Male, age 80, left hemisphere 38.2
1891 Female, age 85, both hemispheres 36.3
2620 Female, age 94, left hemisphere 31.8
2861 Female, age 67, both hemispheres 26.1
Parahippocampal cortex
nTPM: 33.6
2018 Male, age 76, both hemispheres 38.6
1850 Male, age 80, both hemispheres 38.3
1933 Female, age 85, both hemispheres 37.1
2250 Female, age 67, right hemisphere 34.7
2693 Female, age 94, both hemispheres 33.8
1990 Female, age 91, right hemisphere 33.6
2245 Female, age 91, both hemispheres 32.7
2532 Female, age 72, left hemisphere 32.1
2692 Male, age 74, both hemispheres 30.2
2622 Female, age 67, right hemisphere 24.2
Perirhinal gyrus
nTPM: 37.4
1841 Female, age 85, right hemisphere 42.0
2521 Female, age 94, right hemisphere 38.5
1847 Female, age 91, left hemisphere 37.7
1794 Male, age 80, right hemisphere 36.5
2848 Male, age 76, right hemisphere 32.1
Subiculum
nTPM: 35.8
1901 Male, age 80, both hemispheres 39.5
1977 Female, age 85, both hemispheres 38.8
2042 Male, age 76, both hemispheres 38.0
2438 Female, age 94, left hemisphere 35.9
2619 Male, age 74, both hemispheres 31.3
2729 Female, age 91, right hemisphere 31.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 37.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.1
Samples: 197

Max nTPM: 60.5
Min nTPM: 17.9
Std nTPM: 8.5
Median nTPM: 35.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 60.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 58.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 55.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 54.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 53.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 52.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 52.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 52.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 52.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 66.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.9
FF:10153-102I9 76 years, female 73.6
FF:10169-103B7 60 years, female 60.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 60.0
Pig sample Sample description nTPM
Subiculum
nTPM: 45.8
Samples: 4

Max nTPM: 50.0
Min nTPM: 41.4
Sample A Female 50.0
Sample B Female 44.7
Sample C Male 41.4
Sample D Male 47.1
Dorsal hippocampus
nTPM: 60.1
Samples: 4

Max nTPM: 75.2
Min nTPM: 45.7
Sample A Female 75.2
Sample B Female 54.5
Sample C Male 64.8
Sample D Male 45.7
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 50.4
Min nTPM: 38.8
Sample A Female 50.4
Sample B Female 48.2
Sample C Male 41.5
Sample D Male 38.8
Ventral hippocampus
nTPM: 51.2
Samples: 4

Max nTPM: 57.3
Min nTPM: 38.6
Sample A Female 55.9
Sample B Female 38.6
Sample C Male 52.8
Sample D Male 57.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 122.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.0
Samples: 4

Max nTPM: 97.3
Min nTPM: 91.6
Sample A Male 93.6
Sample B Male 91.6
Sample C Female 97.3
Sample D Female 93.4
Hippocampal formation
nTPM: 122.4
Samples: 4

Max nTPM: 135.5
Min nTPM: 110.5
Sample A Male 118.1
Sample B Male 110.5
Sample C Female 135.5
Sample D Female 125.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
73512562 Antisense, RP_050921_01_B08, Mouse strain C57BL/6J (56 days, male) 1.4

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