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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
13.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
12.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
10.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
7.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
4.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIT1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
141.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
136.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
124.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
123.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
122.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
118.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
116.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
112.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
109.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
108.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
105.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
105.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
103.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
102.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
102.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
100.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
100.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
100.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
98.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
97.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
96.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
96.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
95.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
94.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
94.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
94.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
92.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
92.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
92.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
90.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
90.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
90.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
89.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
89.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
88.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
88.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
87.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
86.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
86.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
86.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
85.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
85.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
83.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
82.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
82.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
82.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
82.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
82.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
81.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
80.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
79.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
79.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
79.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
79.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
78.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
78.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
76.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
75.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
75.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
75.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
75.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
75.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
75.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
75.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
74.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
74.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
74.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
74.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
74.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
74.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
73.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
72.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
72.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
72.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
71.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
71.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
70.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
70.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
70.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
70.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
70.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
70.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
69.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
69.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
69.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
69.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
69.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
69.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
69.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
68.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
68.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
68.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
68.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
68.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
68.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
67.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
67.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
67.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
67.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
66.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
66.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
66.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
66.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
65.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
65.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
65.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
65.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
65.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
64.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
64.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
64.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
64.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
64.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
64.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
63.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
63.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
63.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
63.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
63.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
62.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
62.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
62.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
62.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
62.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
61.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
61.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
61.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
61.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
61.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
61.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
60.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
60.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
60.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
60.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
60.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
60.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
60.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
60.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
59.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
59.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
59.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
59.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
59.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
58.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
58.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
58.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
58.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
58.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
57.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
56.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
56.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
56.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
56.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
56.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
56.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
55.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
55.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
55.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
55.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
55.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
54.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
54.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
54.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
54.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
54.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
54.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
54.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
53.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
53.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
53.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
53.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
53.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
53.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
53.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
52.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
52.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
52.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
52.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
52.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
52.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
52.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
51.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
51.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
51.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
51.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
50.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
50.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
50.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
50.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
50.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
49.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
49.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
49.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
49.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
49.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
49.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
49.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
48.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
48.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
48.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
47.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
47.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
47.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
47.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
47.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
47.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
47.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
47.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
47.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
47.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
47.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
47.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
47.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
46.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
46.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
46.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
46.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
46.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
46.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
46.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
45.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
45.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
45.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
45.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
45.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
45.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
45.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
44.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
44.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
44.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
44.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
44.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
43.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
43.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
43.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
43.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
42.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
42.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
41.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
41.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
41.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
41.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
41.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
41.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
40.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
40.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
40.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
40.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
40.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
40.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
39.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
39.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
39.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
39.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
39.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
39.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
39.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
39.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
39.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
39.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
39.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
38.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
38.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
38.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
38.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
37.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
37.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
37.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
37.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
36.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
36.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
36.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
35.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
35.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
35.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
35.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
35.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
35.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
35.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
35.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
35.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
34.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
34.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
34.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
33.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
33.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
33.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
33.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
33.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
33.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
32.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
32.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
32.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
32.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
32.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
31.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
31.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
31.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
30.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
30.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
30.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
29.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
29.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
29.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
29.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
29.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
28.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
28.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
28.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
28.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
28.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
27.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
27.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
27.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
25.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
25.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
25.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
24.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
24.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
23.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
22.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
21.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
20.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
19.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
19.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
15.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIT1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
176.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
109.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
101.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
97.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
97.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
97.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
96.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
96.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
91.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
91.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
91.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
91.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
84.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
84.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
84.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
83.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
83.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
81.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
80.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
79.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
76.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
75.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
71.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
69.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
69.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
67.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
66.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
66.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
66.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
66.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
64.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
62.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
60.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
59.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
58.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
57.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
55.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
55.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
54.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
54.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
54.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
54.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
53.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
50.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
50.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
49.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
47.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
47.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
46.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
45.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
44.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
44.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
43.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
42.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
41.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
39.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
35.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
35.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
33.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
33.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
32.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
32.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
31.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
30.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
29.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
28.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
25.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
18.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
112.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
96.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
89.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
77.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
74.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
74.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
74.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
71.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
69.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
63.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
62.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
60.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
57.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
56.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
56.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
54.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
52.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
51.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
51.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
48.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
47.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
46.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
46.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
44.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
44.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
44.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
43.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
43.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
42.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
40.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
40.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
39.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
39.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
38.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
38.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
38.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
37.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
37.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
37.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
36.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
36.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
36.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
36.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
36.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
35.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
34.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
33.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
33.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
32.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
31.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
31.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
31.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
31.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
31.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
31.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
30.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
30.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
30.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
30.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
30.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
29.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
29.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
29.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
27.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
27.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
26.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
26.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
25.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
24.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
24.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
24.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
23.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
23.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
23.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
22.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
22.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
22.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
21.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
21.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
21.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
20.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
19.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
18.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
18.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
17.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
14.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
14.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077310003
Tumor
0.7
CPT0066430001
Normal
0.6
CPT0087050003
Normal
0.6
CPT0092740003
Normal
0.6
CPT0014350001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0012770003
Normal
0.6
CPT0078510003
Tumor
0.6
CPT0020130001
Normal
0.5
CPT0092800003
Normal
0.5
CPT0012090003
Normal
0.5
CPT0025060001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0009080003
Normal
0.5
CPT0020020001
Normal
0.5
CPT0086370003
Normal
0.5
CPT0006950001
Normal
0.4
CPT0065450001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0078840001
Normal
0.4
CPT0018250001
Normal
0.4
CPT0092310003
Normal
0.4
CPT0089020003
Tumor
0.4
CPT0082010001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0088920001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0006730001
Normal
0.3
CPT0000890001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0023710001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0025920001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0081990003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0075570001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0065820001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0088570001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0007320003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0088900003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0084560003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0025880003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0025050003
Tumor
-0.4
CPT0079510001
Normal
-0.5
CPT0084590001
Normal
-0.5
CPT0092190003
Normal
-0.5
CPT0024670003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0025230003
Tumor
-0.6
CPT0088970003
Tumor
-0.6
CPT0014450004
Tumor
-0.7
CPT0017850003
Tumor
-0.7
CPT0079410003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0002270011
Tumor
-0.7
CPT0078800003
Tumor
-0.8
CPT0078660003
Tumor
-1.0
CPT0079180003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
