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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
50.6
nTPM
HPA Brain:
6.1
nTPM
GTEx:
50.6
nTPM
FANTOM5:
9.4
Scaled Tags Per Million
Pig:
1.1
nTPM
Mouse:
0.6
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
6.1
Sample id
Sample description
nTPM
Amygdala nTPM: 5.1
2695
Female, age 67, right hemisphere
10.6
2814
Male, age 76, right hemisphere
5.0
2514
Male, age 75, right hemisphere
4.3
2517
Female, age 94, left hemisphere
3.3
1987
Female, age 91, left hemisphere
2.4
Basal amygdala nTPM: 2.9
2827
Female, age 67, right hemisphere
4.1
2110
Male, age 80, left hemisphere
3.6
1955
Male, age 76, both hemispheres
3.5
2609
Male, age 75, right hemisphere
2.7
2243
Female, age 91, right hemisphere
1.8
2685
Female, age 94, left hemisphere
1.6
Central amygdala nTPM: 3.9
2515
Male, age 75, right hemisphere
7.5
1905
Male, age 76, both hemispheres
4.6
2239
Male, age 80, left hemisphere
2.9
2701
Female, age 91, right hemisphere
2.4
2826
Female, age 94, left hemisphere
1.9
Corticomedial amygdala nTPM: 2.2
2428
Male, age 75, right hemisphere
4.1
2240
Male, age 76, both hemispheres
3.6
2429
Female, age 94, left hemisphere
2.3
2829
Male, age 80, left hemisphere
1.8
2242
Female, age 91, right hemisphere
0.8
2535
Female, age 67, right hemisphere
0.8
Lateral amygdala nTPM: 6.1
2830
Female, age 67, right hemisphere
12.1
2516
Male, age 75, right hemisphere
8.4
2534
Female, age 94, left hemisphere
7.0
1883
Male, age 76, both hemispheres
3.4
2256
Male, age 80, left hemisphere
2.9
2255
Female, age 91, right hemisphere
2.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
50.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 50.6
Samples: 152
Max nTPM: 600.0
Min nTPM: 0.6
Std nTPM: 81.4
Median nTPM: 24.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
600.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
468.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
361.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
311.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
263.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
240.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
206.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
196.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
181.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
172.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
159.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
139.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
138.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
130.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
122.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
118.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
114.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
110.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
108.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
97.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
90.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
90.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
87.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
85.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
84.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
80.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
77.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
75.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
74.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
68.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
68.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
67.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
65.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
65.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
61.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
60.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
60.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
58.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
55.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
54.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
51.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
51.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
50.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
45.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
43.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
41.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
41.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
40.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
40.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
39.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
38.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
37.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
35.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
34.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
34.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
34.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
33.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
33.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
32.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
31.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
31.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
30.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
30.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
30.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
28.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
28.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
28.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
27.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
27.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
27.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
26.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
24.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
24.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
22.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
21.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
20.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
20.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
20.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
20.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
19.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
18.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
18.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
17.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
17.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
16.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
15.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
13.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
13.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
12.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
12.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
12.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
12.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
12.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
11.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
11.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
11.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
11.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
11.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
11.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
11.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
10.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
10.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
10.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
10.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
10.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
10.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
9.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
9.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
9.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
9.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
8.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
8.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
8.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
8.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
7.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
7.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
7.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
7.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
7.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
6.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
6.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
6.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
5.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
5.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
5.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
5.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
5.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
5.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
5.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
5.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
5.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
4.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
4.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
4.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
4.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
3.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
3.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
3.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
3.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
2.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
2.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
2.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
2.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
2.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
2.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
0.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 0.6
Samples: 4
Max nTPM: 1.6
Min nTPM: 0.0
Sample A
Male
0.2
Sample B
Male
1.6
Sample C
Female
0.0
Sample D
Female
0.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.