HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:95.5 nTPM
HPA Brain:56.5 nTPM
GTEx:95.5 nTPM
FANTOM5:84.0 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:39.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006514
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 56.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.0
1898 Male, age 80, left hemisphere 66.4
2148 Female, age 91, left hemisphere 53.1
1911 Female, age 85, right hemisphere 52.0
2529 Female, age 94, left hemisphere 51.0
2621 Female, age 67, right hemisphere 49.3
1855 Male, age 76, left hemisphere 46.1
Dentate gyrus
nTPM: 52.1
1927 Female, age 91, both hemispheres 59.0
2010 Male, age 76, both hemispheres 57.3
2530 Female, age 94, left hemisphere 53.4
2528 Male, age 74, both hemispheres 53.3
2531 Female, age 67, both hemispheres 50.8
2246 Female, age 85, both hemispheres 38.9
Entorhinal gyrus
nTPM: 48.7
1938 Female, age 85, left hemisphere 53.1
2764 Male, age 80, right hemisphere 49.9
1787 Male, age 76, left hemisphere 49.2
2686 Male, age 75, right hemisphere 48.6
2117 Female, age 91, right hemisphere 48.3
2613 Female, age 94, left hemisphere 43.3
Hippocampus, CA1
nTPM: 51.7
2749 Male, age 80, left hemisphere 61.8
2045 Male, age 76, both hemispheres 52.7
1873 Female, age 85, both hemispheres 50.4
2082 Female, age 91, right hemisphere 47.4
2527 Male, age 74, both hemispheres 46.2
Hippocampus, CA2
nTPM: 54.1
1963 Male, age 80, left hemisphere 63.2
1892 Male, age 76, both hemispheres 59.7
1940 Female, age 85, left hemisphere 53.6
2249 Male, age 74, both hemispheres 51.5
2437 Female, age 94, left hemisphere 49.6
2113 Female, age 91, right hemisphere 47.1
Hippocampus, CA3
nTPM: 56.5
1867 Male, age 76, both hemispheres 61.4
2436 Male, age 74, both hemispheres 60.7
2861 Female, age 67, both hemispheres 60.3
1891 Female, age 85, both hemispheres 54.7
2137 Male, age 80, left hemisphere 54.1
2620 Female, age 94, left hemisphere 47.9
Parahippocampal cortex
nTPM: 45.7
2018 Male, age 76, both hemispheres 53.1
1850 Male, age 80, both hemispheres 51.0
1933 Female, age 85, both hemispheres 50.1
1990 Female, age 91, right hemisphere 48.2
2250 Female, age 67, right hemisphere 47.3
2532 Female, age 72, left hemisphere 43.6
2693 Female, age 94, both hemispheres 43.3
2245 Female, age 91, both hemispheres 41.6
2622 Female, age 67, right hemisphere 40.1
2692 Male, age 74, both hemispheres 38.8
Perirhinal gyrus
nTPM: 50.9
1841 Female, age 85, right hemisphere 55.2
1847 Female, age 91, left hemisphere 53.5
1794 Male, age 80, right hemisphere 53.3
2848 Male, age 76, right hemisphere 46.9
2521 Female, age 94, right hemisphere 45.6
Subiculum
nTPM: 49.2
1901 Male, age 80, both hemispheres 55.5
2042 Male, age 76, both hemispheres 54.9
1977 Female, age 85, both hemispheres 53.2
2729 Female, age 91, right hemisphere 51.3
2619 Male, age 74, both hemispheres 45.1
2438 Female, age 94, left hemisphere 35.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 95.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.5
Samples: 197

Max nTPM: 213.7
Min nTPM: 47.3
Std nTPM: 20.8
Median nTPM: 92.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 213.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 171.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 160.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 159.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 148.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 142.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 138.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 135.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 130.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 129.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 84.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.0
FF:10153-102I9 76 years, female 86.0
FF:10169-103B7 60 years, female 82.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.6
Pig sample Sample description nTPM
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 18.7
Min nTPM: 17.8
Sample A Female 18.6
Sample B Female 17.8
Sample C Male 17.8
Sample D Male 18.7
Dorsal hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 27.0
Min nTPM: 17.8
Sample A Female 27.0
Sample B Female 21.6
Sample C Male 26.3
Sample D Male 17.8
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.9
Min nTPM: 15.5
Sample A Female 19.7
Sample B Female 21.9
Sample C Male 20.7
Sample D Male 15.5
Ventral hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 27.1
Min nTPM: 18.9
Sample A Female 24.7
Sample B Female 18.9
Sample C Male 27.1
Sample D Male 23.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 39.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 37.3
Min nTPM: 31.4
Sample A Male 35.2
Sample B Male 37.3
Sample C Female 36.7
Sample D Female 31.4
Hippocampal formation
nTPM: 39.0
Samples: 4

Max nTPM: 41.2
Min nTPM: 36.2
Sample A Male 41.2
Sample B Male 36.2
Sample C Female 37.5
Sample D Female 41.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69134661 Antisense, RP_050321_03_C04, Mouse strain C57BL/6J (56 days, male) 0.6

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