We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DTL is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
25.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
22.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
17.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
15.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
15.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
13.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
12.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
11.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
10.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
10.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
9.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
9.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
9.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
8.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
8.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
7.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
6.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
6.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
6.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
6.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
6.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
5.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
5.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
5.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
5.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
5.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
4.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
4.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
4.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
4.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
4.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
4.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
3.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
3.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
3.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
3.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
3.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
3.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
2.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
2.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
2.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
2.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
2.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
2.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
2.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
2.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
2.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
2.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
2.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
2.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
2.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
1.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
1.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
0.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
0.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
0.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
0.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
0.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
0.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
0.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
0.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
0.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
0.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
0.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
0.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
0.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
0.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
0.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
0.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
0.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
0.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
0.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
0.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
0.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
0.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
0.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
0.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
0.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
0.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
0.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
0.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DTL is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.7
Number of samples
231
Samples
Sample
Description
TPM
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
14.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
13.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
9.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
8.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
7.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
6.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
6.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
5.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
5.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
5.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
5.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
4.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
4.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
4.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
4.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
3.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
3.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
3.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
3.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
3.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
3.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
3.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
3.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
3.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
3.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
3.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
3.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
3.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
3.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
3.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
3.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
3.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
3.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
3.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
2.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
2.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
2.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
2.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
2.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
2.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
2.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
2.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
2.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
2.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
2.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
2.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
2.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
2.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
2.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
2.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
2.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
2.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
2.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
2.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
2.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
2.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
2.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
2.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
2.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
2.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
2.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
2.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
1.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
1.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
1.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
1.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
1.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
1.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
1.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
1.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
1.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
1.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
1.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
1.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
1.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
1.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
1.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
1.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
1.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
1.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
1.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
1.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
1.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
1.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
1.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
1.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
1.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
1.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
1.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
1.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
1.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
1.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
1.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
1.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
1.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
1.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
1.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
1.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
1.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
0.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
0.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
0.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
0.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
0.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
0.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
0.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
0.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
0.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
0.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
0.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
0.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
0.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
0.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
0.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
0.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
0.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
0.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
0.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
0.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
0.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
0.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
0.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
0.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
721
Tumor
1.5
463
Tumor
1.4
534
Normal
1.2
357
Tumor
1.2
528
Normal
1.2
493
Tumor
1.1
388
Normal
1.1
127
Tumor
1.1
387
Tumor
1.1
222
Normal
1.1
312
Normal
1.1
132
Normal
1.0
146
Normal
1.0
192
Normal
1.0
965
Tumor
0.9
277
Tumor
0.9
957
Tumor
0.9
391
Tumor
0.9
914
Normal
0.9
724
Normal
0.9
138
Normal
0.8
818
Normal
0.8
411
Tumor
0.8
487
Tumor
0.8
951
Tumor
0.8
258
Normal
0.8
137
Tumor
0.8
851
Tumor
0.8
135
Tumor
0.8
136
Normal
0.8
123
Tumor
0.8
953
Tumor
0.8
743
Tumor
0.8
257
Tumor
0.8
351
Tumor
0.8
314
Normal
0.8
392
Normal
0.8
261
Tumor
0.7
361
Tumor
0.7
862
Normal
0.7
394
Normal
0.7
375
Tumor
0.7
393
Tumor
0.7
878
Normal
0.6
516
Normal
0.6
332
Normal
0.6
396
Normal
0.6
358
Normal
0.6
616
Normal
0.6
912
Normal
0.6
218
Normal
0.6
877
Tumor
0.6
114
Normal
0.6
272
Normal
0.6
213
Tumor
0.6
497
Tumor
0.5
1013
Tumor
0.5
737
Tumor
0.5
262
Normal
0.5
191
Tumor
0.5
128
Normal
0.5
376
Normal
0.5
852
Normal
0.5
523
Tumor
0.5
386
Normal
0.5
217
Tumor
0.5
1046
Normal
0.5
368
Normal
0.5
286
Normal
0.4
278
Normal
0.4
868
Normal
0.4
343
Tumor
0.4
267
Tumor
0.4
464
Normal
0.4
882
Normal
0.4
635
Tumor
0.4
1022
Normal
0.4
384
Normal
0.4
538
Normal
0.3
285
Tumor
0.3
483
Tumor
0.3
884
Normal
0.3
911
Tumor
0.3
341
Tumor
0.3
1045
Tumor
0.3
331
Tumor
0.3
465
Tumor
0.3
366
Normal
0.3
883
Tumor
0.3
874
Normal
0.3
271
Tumor
0.3
126
Normal
0.3
231
Tumor
0.3
142
Normal
0.3
1025
Tumor
0.3
383
Tumor
0.3
515
Tumor
0.3
943
Tumor
0.3
916
Normal
0.3
211
Tumor
0.3
365
Tumor
0.3
298
Normal
0.3
313
Tumor
0.3
214
Normal
0.3
141
Tumor
0.3
956
Normal
0.2
867
Tumor
0.2
362
Normal
0.2
297
Tumor
0.2
1032
Normal
0.2
461
Tumor
0.2
268
Normal
0.2
224
Normal
0.2
977
Tumor
0.2
858
Normal
0.2
491
Tumor
0.2
111
Normal
0.2
526
Normal
0.2
283
Tumor
0.2
415
Tumor
0.1
196
Normal
0.1
395
Tumor
0.1
355
Tumor
0.1
527
Tumor
0.1
467
Tumor
0.1
221
Tumor
0.1
554
Normal
0.1
232
Normal
0.1
432
Normal
0.1
525
Tumor
0.1
756
Normal
0.1
446
Normal
0.1
777
Tumor
0.1
573
Tumor
0.1
131
Tumor
0.1
517
Tumor
0.0
284
Normal
0.0
385
Tumor
0.0
228
Normal
0.0
824
Normal
0.0
524
Normal
0.0
863
Tumor
0.0
746
Normal
0.0
857
Tumor
0.0
924
Normal
0.0
311
Tumor
0.0
816
Normal
0.0
1026
Normal
0.0
913
Tumor
-0.1
815
Tumor
-0.1
983
Tumor
-0.1
145
Tumor
-0.1
672
Normal
-0.1
436
Normal
-0.1
785
Tumor
-0.1
615
Tumor
-0.1
865
Tumor
-0.1
435
Tumor
-0.1
926
Normal
-0.1
195
Tumor
-0.1
666
Normal
-0.1
367
Tumor
-0.1
923
Tumor
-0.1
722
Normal
-0.1
124
Normal
-0.1
1041
Tumor
-0.1
1028
Normal
-0.1
451
Tumor
-0.1
456
Normal
-0.1
918
Normal
-0.1
113
Tumor
-0.1
431
Tumor
-0.1
518
Normal
-0.1
1042
Normal
-0.2
881
Tumor
-0.2
574
Normal
-0.2
975
Tumor
-0.2
227
Tumor
-0.2
494
Normal
-0.2
125
Tumor
-0.2
745
Tumor
-0.2
513
Tumor
-0.2
1016
Normal
-0.2
212
Normal
-0.2
982
Normal
-0.2
823
Tumor
-0.2
452
Normal
-0.2
741
Tumor
-0.2
1044
Normal
-0.2
713
Tumor
-0.2
462
Normal
-0.2
716
Normal
-0.2
714
Normal
-0.2
917
Tumor
-0.2
968
Normal
-0.2
978
Normal
-0.3
958
Normal
-0.3
642
Normal
-0.3
636
Normal
-0.3
444
Normal
-0.3
112
Tumor
-0.3
481
Tumor
-0.3
473
Tumor
-0.3
976
Normal
-0.3
966
Normal
-0.3
715
Tumor
-0.3
571
Tumor
-0.3
327
Tumor
-0.3
967
Tumor
-0.3
618
Normal
-0.3
937
Tumor
-0.3
455
Tumor
-0.3
466
Normal
-0.3
728
Normal
-0.3
662
Normal
-0.3
864
Normal
-0.3
664
Normal
-0.3
866
Normal
-0.3
686
Normal
-0.3
425
Tumor
-0.3
553
Tumor
-0.3
223
Tumor
-0.4
546
Normal
-0.4
873
Tumor
-0.4
1014
Normal
-0.4
1027
Tumor
-0.4
364
Normal
-0.4
944
Normal
-0.4
416
Normal
-0.4
665
Tumor
-0.4
468
Normal
-0.4
474
Normal
-0.4
514
Normal
-0.4
964
Normal
-0.4
915
Tumor
-0.4
963
Tumor
-0.4
814
Normal
-0.4
412
Normal
-0.4
356
Normal
-0.5
698
Normal
-0.5
564
Normal
-0.5
423
Tumor
-0.5
954
Normal
-0.5
981
Tumor
-0.5
955
Tumor
-0.5
572
Normal
-0.5
628
Normal
-0.5
984
Normal
-0.5
568
Normal
-0.5
482
Normal
-0.5
813
Tumor
-0.5
648
Normal
-0.5
498
Normal
-0.5
537
Tumor
-0.5
1043
Tumor
-0.5
477
Tumor
-0.5
786
Normal
-0.5
922
Normal
-0.5
426
Normal
-0.5
938
Normal
-0.6
427
Tumor
-0.6
778
Normal
-0.6
344
Normal
-0.6
727
Tumor
-0.6
472
Normal
-0.6
695
Tumor
-0.6
488
Normal
-0.6
685
Tumor
-0.6
354
Normal
-0.6
545
Tumor
-0.6
696
Normal
-0.6
484
Normal
-0.6
1015
Tumor
-0.6
448
Normal
-0.6
533
Tumor
-0.6
627
Tumor
-0.6
742
Normal
-0.6
421
Tumor
-0.7
352
Normal
-0.7
755
Tumor
-0.7
363
Tumor
-0.7
925
Tumor
-0.7
921
Tumor
-0.7
1021
Tumor
-0.7
328
Normal
-0.7
414
Normal
-0.7
557
Tumor
-0.7
563
Tumor
-0.7
817
Tumor
-0.7
443
Tumor
-0.7
342
Normal
-0.7
952
Normal
-0.8
661
Tumor
-0.8
424
Normal
-0.8
478
Normal
-0.8
663
Tumor
-0.8
433
Tumor
-0.8
671
Tumor
-0.8
445
Tumor
-0.8
861
Tumor
-0.8
428
Normal
-0.9
558
Normal
-0.9
647
Tumor
-0.9
567
Tumor
-0.9
744
Normal
-0.9
447
Tumor
-0.9
353
Tumor
-0.9
697
Tumor
-1.0
738
Normal
-1.0
413
Tumor
-1.0
641
Tumor
-1.1
723
Tumor
-1.1
434
Normal
-1.1
617
Tumor
-1.2
422
Normal
-1.2
492
Normal
-1.2
536
Normal
-1.2
471
Tumor
-1.3
1031
Tumor
-1.3
535
Tumor
-1.7
147
Tumor
N/A
148
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
171
Tumor
N/A
172
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
