Expression of RFX5 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

RFX5 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 21.63

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

16.5

Number of samples

492

Samples

Sample	Description	TPM
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	84.7
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	80.4
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	64.7
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	62.2
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	56.7
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	50.1
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	49.4
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	47.5
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	47.3
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	43.5
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	43.3
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	41.9
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	41.5
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	40.4
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	38.0
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	37.8
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	37.8
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	37.2
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	36.8
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	36.6
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	36.6
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	36.5
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	36.1
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	36.0
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	35.8
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	35.3
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	34.7
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	34.7
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	34.0
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	33.7
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	33.6
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	33.6
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	33.0
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	33.0
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	32.6
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	32.5
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	32.1
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	31.5
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	31.4
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	31.2
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	31.2
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	31.0
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	29.5
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	29.1
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	28.7
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	28.6
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	28.6
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	28.3
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	28.2
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	28.2
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	28.2
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	28.2
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	27.8
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	27.8
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	27.6
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	27.6
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	27.5
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	26.9
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	26.7
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	26.6
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	26.6
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	26.5
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	26.4
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	26.4
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	26.4
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	26.3
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	26.2
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	26.0
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	25.9
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	25.9
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	25.9
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	25.9
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	25.8
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	25.7
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	25.6
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	25.4
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	25.1
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	24.9
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	24.7
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	24.5
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	24.5
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	24.3
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	24.2
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	24.0
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	23.9
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	23.6
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	23.5
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	23.4
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	23.4
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	23.3
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	23.2
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	23.1
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	22.9
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	22.7
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	22.3
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	22.2
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	22.0
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	22.0
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	21.9
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	21.7
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	21.7
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	21.6
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	21.6
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	21.6
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	21.5
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	21.5
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	21.4
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	21.4
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	21.2
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	21.1
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	21.1
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	21.0
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	20.8
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	20.8
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	20.7
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	20.7
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	20.7
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	20.6
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	20.6
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	20.5
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	20.4
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	20.3
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	20.3
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	20.2
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	20.1
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	20.1
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	20.1
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	20.1
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	19.9
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	19.9
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	19.9
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	19.9
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	19.8
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	19.7
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	19.7
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	19.6
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	19.5
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	19.5
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	19.5
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	19.4
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	19.4
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	19.2
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	19.2
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	19.1
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	19.1
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	19.0
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	18.9
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	18.9
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	18.7
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	18.7
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	18.6
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	18.6
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	18.6
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	18.6
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	18.6
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	18.5
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	18.5
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	18.5
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	18.5
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	18.4
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	18.4
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	18.3
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	18.2
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	18.2
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	18.2
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	18.1
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	18.1
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	18.0
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	18.0
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	17.8
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	17.7
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	17.7
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	17.7
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	17.6
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	17.6
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	17.6
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	17.6
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	17.5
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	17.5
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	17.4
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	17.2
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	17.2
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	17.1
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	17.1
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	17.1
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	17.1
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	17.0
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	17.0
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	16.9
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	16.9
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	16.8
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	16.7
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	16.5
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	16.5
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	16.5
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	16.4
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	16.3
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	16.3
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	16.3
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	16.3
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	16.3
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	16.2
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	16.0
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	16.0
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	15.9
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	15.9
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	15.9
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	15.9
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	15.8
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	15.8
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	15.8
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	15.8
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	15.7
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	15.7
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	15.7
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	15.6
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	15.6
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	15.6
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	15.5
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	15.5
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	15.2
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	15.2
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	15.1
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	15.0
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	15.0
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	14.9
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	14.9
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	14.9
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	14.8
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	14.8
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	14.8
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	14.8
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	14.8
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	14.8
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	14.7
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	14.7
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	14.7
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	14.6
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	14.6
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	14.6
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	14.6
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	14.6
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	14.5
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	14.5
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	14.3
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	14.3
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	14.3
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	14.2
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	14.2
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	14.1
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	14.0
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	14.0
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	13.9
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	13.9
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	13.8
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	13.8
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	13.8
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	13.8
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	13.8
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	13.8
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	13.7
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	13.7
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	13.6
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	13.5
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	13.5
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	13.5
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	13.5
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	13.4
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	13.4
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	13.3
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	13.3
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	13.2
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	13.2
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	13.1
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	13.1
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	13.1
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	13.1
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	13.1
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	13.0
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	13.0
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	13.0
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	13.0
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	13.0
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	12.8
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	12.7
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	12.7
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	12.7
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	12.5
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	12.5
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	12.5
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	12.4
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	12.4
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	12.4
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	12.4
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	12.3
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	12.3
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	12.3
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	12.2
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	12.2
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	12.2
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	12.2
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	12.1
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	12.1
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	12.1
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	12.1
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	12.1
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	12.1
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	12.0
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	12.0
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	11.9
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	11.9
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	11.9
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	11.8
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	11.8
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	11.8
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	11.8
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	11.8
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	11.8
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	11.8
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	11.7
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	11.7
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	11.7
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	11.7
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	11.6
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	11.6
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	11.6
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	11.6
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	11.6
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	11.6
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	11.5
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	11.4
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	11.4
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	11.3
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	11.2
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	11.2
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	11.1
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	11.1
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	11.1
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	11.1
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	11.1
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	11.1
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	11.0
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	11.0
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	11.0
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	10.9
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	10.8
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	10.8
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	10.8
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	10.8
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	10.8
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	10.7
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	10.7
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	10.7
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	10.6
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	10.6
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	10.6
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	10.5
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	10.5
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	10.5
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	10.5
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	10.4
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	10.4
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	10.4
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	10.4
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	10.3
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	10.3
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	10.3
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	10.2
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	10.2
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	10.1
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	10.1
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	10.1
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	10.0
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	10.0
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	10.0
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	9.9
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	9.8
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	9.8
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	9.8
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	9.8
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	9.8
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	9.7
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	9.7
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	9.7
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	9.6
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	9.6
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	9.6
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	9.6
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	9.5
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	9.4
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	9.4
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	9.3
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	9.2
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	9.2
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	9.2
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	9.1
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	9.1
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	8.9
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	8.9
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	8.8
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	8.8
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	8.7
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	8.7
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	8.7
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	8.6
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	8.6
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	8.6
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	8.5
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	8.5
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	8.5
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	8.4
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	8.3
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	8.2
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	8.1
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	8.1
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	7.9
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	7.9
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	7.9
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	7.9
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	7.9
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	7.8
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	7.8
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	7.7
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	7.7
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	7.6
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	7.6
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	7.6
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	7.6
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	7.5
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	7.4
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	7.4
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	7.4
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	7.4
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	7.3
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	7.2
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	7.2
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	7.2
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	7.2
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	7.2
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	7.1
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	7.1
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	7.0
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	7.0
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	6.7
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	6.7
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	6.7
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	6.6
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	6.5
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	6.5
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	6.4
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	6.2
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	6.1
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	6.0
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	5.8
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	5.8
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	5.7
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	5.7
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	5.6
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	5.5
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	5.4
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	5.3
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	5.3
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	5.1
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	5.1
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	5.0
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	5.0
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	4.9
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	4.8
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	4.7
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	4.7
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	4.7
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	4.6
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	4.6
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	4.6
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	4.0
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	4.0
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	4.0
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	3.9
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	3.8
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	3.7
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	3.7
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	3.5
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	3.0
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	2.8
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	2.7
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	2.5
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	2.5
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	1.9
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	1.9
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	1.6
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	1.2
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	1.1
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0194790003	Tumor	1.4
CPT0226250004	Tumor	1.3
CPT0163090003	Tumor	1.0
CPT0226130003	Tumor	1.0
CPT0245350003	Tumor	1.0
CPT0245680003	Tumor	0.9
CPT0013030003	Normal	0.9
CPT0163600003	Tumor	0.8
CPT0236850004	Tumor	0.8
CPT0094490004	Tumor	0.7
C3N-01620-05	Normal	0.6
CPT0024810003	Tumor	0.6
CPT0199880003	Tumor	0.6
CPT0196040003	Tumor	0.6
CPT0163160003	Tumor	0.5
CPT0190850003	Tumor	0.5
CPT0245450003	Tumor	0.5
CPT0084630009	Tumor	0.4
CPT0281470002	Normal	0.4
CPT0243090003	Tumor	0.4
CPT0008630003	Tumor	0.4
CPT0237640003	Normal	0.4
CPT0226390003	Tumor	0.4
CPT0245410003	Normal	0.4
CPT0250310003	Tumor	0.3
CPT0246620003	Tumor	0.3
CPT0127050003	Tumor	0.3
CPT0163800003	Normal	0.3
CPT0229220002	Normal	0.3
CPT0088430003	Normal	0.3
CPT0245230004	Tumor	0.3
CPT0226030003	Tumor	0.3
CPT0177710003	Tumor	0.3
C3N-04275-05	Normal	0.3
CPT0237500003	Normal	0.3
CPT0235470002	Normal	0.3
CPT0261520003	Tumor	0.3
CPT0013210004	Tumor	0.3
CPT0195680003	Tumor	0.3
CPT0245400003	Tumor	0.3
CPT0243140004	Normal	0.3
CPT0094280004	Tumor	0.2
CPT0244890004	Tumor	0.2
CPT0013000004	Tumor	0.2
CPT0163910003	Tumor	0.2
CPT0237150003	Normal	0.2
CPT0013430003	Tumor	0.2
CPT0162890003	Tumor	0.2
C3N-01758-04	Normal	0.2
CPT0245140003	Normal	0.2
CPT0195860003	Tumor	0.2
CPT0177010003	Tumor	0.2
CPT0177390003	Tumor	0.2
CPT0176770003	Tumor	0.2
CPT0207870004	Tumor	0.2
CPT0201830004	Tumor	0.2
CPT0245300003	Tumor	0.2
CPT0163840003	Tumor	0.2
CPT0163650003	Tumor	0.2
CPT0220620003	Normal	0.2
CPT0222200003	Normal	0.1
CPT0245060004	Tumor	0.1
CPT0184530003	Tumor	0.1
CPT0094580003	Normal	0.1
CPT0278700002	Normal	0.1
CPT0245130003	Tumor	0.1
CPT0013130003	Tumor	0.1
CPT0088410003	Tumor	0.1
CPT0087820003	Tumor	0.1
CPT0241980004	Tumor	0.1
CPT0163860003	Normal	0.1
C3N-04279-05	Normal	0.1
CPT0245190003	Normal	0.1
CPT0088080003	Normal	0.0
CPT0163250003	Normal	0.0
CPT0177200003	Tumor	0.0
CPT0084650004	Normal	0.0
CPT0195880003	Normal	0.0
CPT0222180003	Tumor	0.0
CPT0226090003	Normal	0.0
CPT0163720003	Normal	0.0
CPT0199710003	Normal	0.0
CPT0194960003	Tumor	0.0
CPT0237620004	Tumor	0.0
CPT0190860003	Normal	0.0
CPT0236870003	Normal	0.0
CPT0177220003	Normal	0.0
CPT0195700003	Normal	0.0
CPT0201860004	Normal	0.0
CPT0248350003	Normal	0.0
CPT0163170003	Normal	0.0
CPT0163530003	Tumor	0.0
CPT0245550003	Tumor	0.0
CPT0088010003	Normal	0.0
CPT0194260003	Normal	0.0
CPT0245630003	Tumor	0.0
CPT0163480003	Tumor	0.0
CPT0169730003	Tumor	0.0
C3N-04276-06	Normal	0.0
CPT0013250003	Normal	0.0
CPT0245010003	Tumor	0.0
C3N-00857-05	Normal	0.0
CPT0094560004	Tumor	-0.1
CPT0245460003	Normal	-0.1
CPT0008930003	Tumor	-0.1
CPT0226270003	Normal	-0.1
CPT0088060004	Tumor	-0.1
CPT0194420003	Tumor	-0.1
CPT0223450003	Tumor	-0.1
CPT0163020003	Normal	-0.1
CPT0223460003	Normal	-0.1
CPT0013460003	Normal	-0.1
CPT0163430003	Normal	-0.1
CPT0169890003	Tumor	-0.1
CPT0169740004	Normal	-0.1
CPT0163490003	Normal	-0.1
CPT0087990003	Tumor	-0.1
CPT0008520008	Tumor	-0.1
CPT0223970003	Tumor	-0.1
CPT0123260003	Tumor	-0.1
CPT0123280003	Normal	-0.1
CPT0163340003	Tumor	-0.1
CPT0163610003	Normal	-0.1
CPT0123180003	Tumor	-0.1
CPT0226350003	Normal	-0.2
CPT0094350004	Tumor	-0.2
CPT0199820003	Tumor	-0.2
CPT0256560003	Tumor	-0.2
CPT0236640003	Normal	-0.2
CPT0245560003	Normal	-0.2
CPT0095040003	Tumor	-0.2
CPT0237480004	Tumor	-0.2
CPT0199830003	Normal	-0.2
CPT0194800003	Normal	-0.2
CPT0245730003	Tumor	-0.2
CPT0226400003	Normal	-0.2
CPT0246590003	Tumor	-0.2
CPT0123190003	Normal	-0.2
CPT0245500003	Tumor	-0.2
CPT0242000004	Normal	-0.2
CPT0222360003	Tumor	-0.2
CPT0199890003	Normal	-0.3
C3N-00295-05	Normal	-0.3
C3N-01859-04	Normal	-0.3
CPT0246540003	Tumor	-0.3
CPT0199700003	Tumor	-0.3
CPT0245600003	Tumor	-0.3
CPT0226450003	Normal	-0.3
CPT0248520003	Tumor	-0.3
CPT0245020003	Normal	-0.3
C3N-02693-06	Normal	-0.3
CPT0236620003	Tumor	-0.3
CPT0235920003	Normal	-0.3
CPT0226340003	Tumor	-0.3
CPT0245180003	Tumor	-0.3
CPT0196060003	Normal	-0.4
CPT0169920003	Normal	-0.4
CPT0248330003	Tumor	-0.4
CPT0196210003	Tumor	-0.4
CPT0244940004	Tumor	-0.4
CPT0163240003	Tumor	-0.4
CPT0163790003	Tumor	-0.4
CPT0011290003	Tumor	-0.4
CPT0163740003	Tumor	-0.4
CPT0011130005	Tumor	-0.4
CPT0163410003	Tumor	-0.5
CPT0169640003	Tumor	-0.5
CPT0008960003	Normal	-0.5
CPT0162990004	Tumor	-0.5
CPT0220610003	Tumor	-0.5
CPT0237130004	Tumor	-0.5
CPT0226440003	Tumor	-0.5
CPT0235910003	Tumor	-0.5
CPT0246670003	Tumor	-0.6
CPT0094420004	Tumor	-0.6
CPT0194250003	Tumor	-0.6
CPT0235460003	Tumor	-0.7
CPT0011320003	Normal	-0.7
CPT0162940003	Tumor	-0.7
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA018519
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS
Adenocarcinoma, NOS