HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.0 nTPM
HPA Brain:29.8 nTPM
GTEx:19.0 nTPM
FANTOM5:34.0 Scaled Tags Per Million
Pig:44.2 nTPM
Mouse:34.8 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028578
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
2621 Female, age 67, right hemisphere 35.2
1855 Male, age 76, left hemisphere 29.6
1911 Female, age 85, right hemisphere 26.9
1898 Male, age 80, left hemisphere 25.7
2148 Female, age 91, left hemisphere 25.4
2529 Female, age 94, left hemisphere 23.6
Dentate gyrus
nTPM: 25.9
2010 Male, age 76, both hemispheres 32.7
2246 Female, age 85, both hemispheres 28.5
2531 Female, age 67, both hemispheres 26.1
1927 Female, age 91, both hemispheres 24.5
2528 Male, age 74, both hemispheres 22.0
2530 Female, age 94, left hemisphere 21.5
Entorhinal gyrus
nTPM: 27.1
1787 Male, age 76, left hemisphere 31.5
1938 Female, age 85, left hemisphere 28.6
2117 Female, age 91, right hemisphere 27.2
2764 Male, age 80, right hemisphere 26.2
2686 Male, age 75, right hemisphere 25.7
2613 Female, age 94, left hemisphere 23.7
Hippocampus, CA1
nTPM: 27.4
2045 Male, age 76, both hemispheres 31.9
1873 Female, age 85, both hemispheres 26.9
2749 Male, age 80, left hemisphere 26.7
2527 Male, age 74, both hemispheres 26.4
2082 Female, age 91, right hemisphere 25.0
Hippocampus, CA2
nTPM: 26.6
1892 Male, age 76, both hemispheres 38.0
1940 Female, age 85, left hemisphere 30.1
2249 Male, age 74, both hemispheres 24.4
2113 Female, age 91, right hemisphere 23.2
2437 Female, age 94, left hemisphere 22.9
1963 Male, age 80, left hemisphere 21.2
Hippocampus, CA3
nTPM: 29.8
2620 Female, age 94, left hemisphere 36.3
1867 Male, age 76, both hemispheres 33.9
2861 Female, age 67, both hemispheres 31.4
2436 Male, age 74, both hemispheres 26.6
1891 Female, age 85, both hemispheres 25.6
2137 Male, age 80, left hemisphere 24.8
Parahippocampal cortex
nTPM: 27.9
2245 Female, age 91, both hemispheres 33.3
2622 Female, age 67, right hemisphere 30.9
2532 Female, age 72, left hemisphere 30.2
2693 Female, age 94, both hemispheres 28.6
1850 Male, age 80, both hemispheres 26.7
2692 Male, age 74, both hemispheres 26.4
2250 Female, age 67, right hemisphere 26.2
1933 Female, age 85, both hemispheres 25.6
1990 Female, age 91, right hemisphere 25.5
2018 Male, age 76, both hemispheres 25.1
Perirhinal gyrus
nTPM: 29.0
2848 Male, age 76, right hemisphere 38.4
1794 Male, age 80, right hemisphere 27.8
1841 Female, age 85, right hemisphere 27.8
2521 Female, age 94, right hemisphere 27.0
1847 Female, age 91, left hemisphere 23.9
Subiculum
nTPM: 28.6
2042 Male, age 76, both hemispheres 34.9
2619 Male, age 74, both hemispheres 31.6
2438 Female, age 94, left hemisphere 30.5
1901 Male, age 80, both hemispheres 27.1
1977 Female, age 85, both hemispheres 26.2
2729 Female, age 91, right hemisphere 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 34.8
Min nTPM: 11.4
Std nTPM: 4.0
Median nTPM: 18.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 34.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 34.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 33.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 28.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 28.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 26.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 26.6
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 26.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 26.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.0
FF:10153-102I9 76 years, female 40.0
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 44.2
Pig sample Sample description nTPM
Subiculum
nTPM: 40.8
Samples: 4

Max nTPM: 51.6
Min nTPM: 35.4
Sample A Female 51.6
Sample B Female 35.8
Sample C Male 40.2
Sample D Male 35.4
Dorsal hippocampus
nTPM: 44.2
Samples: 4

Max nTPM: 51.9
Min nTPM: 40.3
Sample A Female 51.9
Sample B Female 41.0
Sample C Male 43.6
Sample D Male 40.3
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 42.1
Min nTPM: 33.8
Sample A Female 42.1
Sample B Female 35.9
Sample C Male 33.8
Sample D Male 35.5
Ventral hippocampus
nTPM: 42.6
Samples: 4

Max nTPM: 55.5
Min nTPM: 30.2
Sample A Female 39.4
Sample B Female 30.2
Sample C Male 55.5
Sample D Male 45.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 34.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 32.5
Min nTPM: 26.6
Sample A Male 26.6
Sample B Male 29.7
Sample C Female 28.1
Sample D Female 32.5
Hippocampal formation
nTPM: 34.8
Samples: 4

Max nTPM: 36.7
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 35.8
Sample C Female 36.0
Sample D Female 36.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
69173325 Antisense, RP_050329_01_D04, Mouse strain C57BL/6J (56 days, male) 7.1

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