HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:20.5 nTPM
HPA Brain:61.2 nTPM
GTEx:20.5 nTPM
FANTOM5:83.5 Scaled Tags Per Million
Pig:42.2 nTPM
Mouse:50.9 nTPM
Allen mouse:10.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019788
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 61.2
Sample id Sample description nTPM
Hippocampus
nTPM: 53.9
1855 Male, age 76, left hemisphere 58.5
2621 Female, age 67, right hemisphere 55.2
1898 Male, age 80, left hemisphere 54.3
1911 Female, age 85, right hemisphere 53.9
2529 Female, age 94, left hemisphere 52.4
2148 Female, age 91, left hemisphere 49.0
Dentate gyrus
nTPM: 49.3
2010 Male, age 76, both hemispheres 55.2
1927 Female, age 91, both hemispheres 54.7
2246 Female, age 85, both hemispheres 52.9
2528 Male, age 74, both hemispheres 46.6
2531 Female, age 67, both hemispheres 44.3
2530 Female, age 94, left hemisphere 42.3
Entorhinal gyrus
nTPM: 48.9
2117 Female, age 91, right hemisphere 56.8
1787 Male, age 76, left hemisphere 56.0
1938 Female, age 85, left hemisphere 50.6
2764 Male, age 80, right hemisphere 48.4
2686 Male, age 75, right hemisphere 41.1
2613 Female, age 94, left hemisphere 40.6
Hippocampus, CA1
nTPM: 61.2
2749 Male, age 80, left hemisphere 102.2
1873 Female, age 85, both hemispheres 57.2
2527 Male, age 74, both hemispheres 51.3
2045 Male, age 76, both hemispheres 50.1
2082 Female, age 91, right hemisphere 44.9
Hippocampus, CA2
nTPM: 49.9
1963 Male, age 80, left hemisphere 61.1
1892 Male, age 76, both hemispheres 55.4
2249 Male, age 74, both hemispheres 49.8
2113 Female, age 91, right hemisphere 48.0
1940 Female, age 85, left hemisphere 44.5
2437 Female, age 94, left hemisphere 40.4
Hippocampus, CA3
nTPM: 55.2
2137 Male, age 80, left hemisphere 81.9
1867 Male, age 76, both hemispheres 56.6
2436 Male, age 74, both hemispheres 52.4
1891 Female, age 85, both hemispheres 51.7
2620 Female, age 94, left hemisphere 46.8
2861 Female, age 67, both hemispheres 41.9
Parahippocampal cortex
nTPM: 48.9
2250 Female, age 67, right hemisphere 54.4
2245 Female, age 91, both hemispheres 54.0
1933 Female, age 85, both hemispheres 51.4
2692 Male, age 74, both hemispheres 50.9
1850 Male, age 80, both hemispheres 50.6
1990 Female, age 91, right hemisphere 50.6
2018 Male, age 76, both hemispheres 48.1
2693 Female, age 94, both hemispheres 45.0
2532 Female, age 72, left hemisphere 44.7
2622 Female, age 67, right hemisphere 39.5
Perirhinal gyrus
nTPM: 51.9
1847 Female, age 91, left hemisphere 55.7
2521 Female, age 94, right hemisphere 54.5
1841 Female, age 85, right hemisphere 50.0
1794 Male, age 80, right hemisphere 49.6
2848 Male, age 76, right hemisphere 49.5
Subiculum
nTPM: 54.1
1901 Male, age 80, both hemispheres 62.8
2042 Male, age 76, both hemispheres 58.9
1977 Female, age 85, both hemispheres 53.3
2438 Female, age 94, left hemisphere 50.7
2619 Male, age 74, both hemispheres 50.5
2729 Female, age 91, right hemisphere 48.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.5
Samples: 197

Max nTPM: 38.8
Min nTPM: 9.2
Std nTPM: 4.7
Median nTPM: 19.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 37.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 34.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 33.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 33.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 32.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 32.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 31.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 31.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 83.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.5
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 79.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 42.2
Pig sample Sample description nTPM
Subiculum
nTPM: 42.2
Samples: 4

Max nTPM: 57.8
Min nTPM: 36.0
Sample A Female 57.8
Sample B Female 38.7
Sample C Male 36.3
Sample D Male 36.0
Dorsal hippocampus
nTPM: 37.2
Samples: 4

Max nTPM: 45.1
Min nTPM: 27.6
Sample A Female 45.1
Sample B Female 40.0
Sample C Male 27.6
Sample D Male 36.2
Entorhinal cortex
nTPM: 38.0
Samples: 4

Max nTPM: 47.2
Min nTPM: 32.9
Sample A Female 47.2
Sample B Female 37.5
Sample C Male 34.5
Sample D Male 32.9
Ventral hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 38.6
Min nTPM: 27.9
Sample A Female 32.0
Sample B Female 27.9
Sample C Male 35.2
Sample D Male 38.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 50.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.9
Samples: 4

Max nTPM: 60.0
Min nTPM: 46.7
Sample A Male 46.7
Sample B Male 48.9
Sample C Female 48.1
Sample D Female 60.0
Hippocampal formation
nTPM: 48.7
Samples: 4

Max nTPM: 55.0
Min nTPM: 44.0
Sample A Male 47.0
Sample B Male 48.9
Sample C Female 55.0
Sample D Female 44.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.5
70439105 Antisense, RP_050614_03_B09, Mouse strain C57BL/6J (56 days, male) 10.5

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