HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:19.1 nTPM
HPA Brain:30.3 nTPM
GTEx:19.1 nTPM
FANTOM5:109.8 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:22.0 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047151Antibody HPA050546Antibody HPA070991
Glial cells Not detectedLowMedium
Neuronal cells LowLowLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
2529 Female, age 94, left hemisphere 33.7
1855 Male, age 76, left hemisphere 31.4
1898 Male, age 80, left hemisphere 30.8
2148 Female, age 91, left hemisphere 29.4
1911 Female, age 85, right hemisphere 29.3
2621 Female, age 67, right hemisphere 27.2
Dentate gyrus
nTPM: 25.7
2528 Male, age 74, both hemispheres 29.6
2010 Male, age 76, both hemispheres 27.7
2246 Female, age 85, both hemispheres 27.4
2530 Female, age 94, left hemisphere 25.9
1927 Female, age 91, both hemispheres 23.7
2531 Female, age 67, both hemispheres 19.9
Entorhinal gyrus
nTPM: 26.4
2117 Female, age 91, right hemisphere 32.7
1938 Female, age 85, left hemisphere 27.6
1787 Male, age 76, left hemisphere 26.0
2686 Male, age 75, right hemisphere 25.8
2764 Male, age 80, right hemisphere 25.3
2613 Female, age 94, left hemisphere 20.7
Hippocampus, CA1
nTPM: 25.9
2527 Male, age 74, both hemispheres 30.3
2082 Female, age 91, right hemisphere 27.3
1873 Female, age 85, both hemispheres 27.1
2045 Male, age 76, both hemispheres 23.8
2749 Male, age 80, left hemisphere 21.1
Hippocampus, CA2
nTPM: 27.5
2249 Male, age 74, both hemispheres 28.7
1963 Male, age 80, left hemisphere 28.4
2113 Female, age 91, right hemisphere 28.4
1940 Female, age 85, left hemisphere 28.3
2437 Female, age 94, left hemisphere 26.3
1892 Male, age 76, both hemispheres 25.0
Hippocampus, CA3
nTPM: 26.9
2436 Male, age 74, both hemispheres 33.5
1891 Female, age 85, both hemispheres 31.6
2620 Female, age 94, left hemisphere 25.8
1867 Male, age 76, both hemispheres 25.0
2861 Female, age 67, both hemispheres 22.9
2137 Male, age 80, left hemisphere 22.6
Parahippocampal cortex
nTPM: 26.9
2692 Male, age 74, both hemispheres 30.1
2250 Female, age 67, right hemisphere 28.1
1850 Male, age 80, both hemispheres 27.9
1933 Female, age 85, both hemispheres 27.0
2018 Male, age 76, both hemispheres 27.0
2622 Female, age 67, right hemisphere 27.0
1990 Female, age 91, right hemisphere 26.5
2245 Female, age 91, both hemispheres 25.3
2532 Female, age 72, left hemisphere 25.1
2693 Female, age 94, both hemispheres 24.5
Perirhinal gyrus
nTPM: 26.1
2521 Female, age 94, right hemisphere 28.1
1841 Female, age 85, right hemisphere 27.2
2848 Male, age 76, right hemisphere 25.4
1847 Female, age 91, left hemisphere 25.1
1794 Male, age 80, right hemisphere 24.5
Subiculum
nTPM: 28.2
2729 Female, age 91, right hemisphere 31.0
2042 Male, age 76, both hemispheres 30.4
2619 Male, age 74, both hemispheres 30.2
1977 Female, age 85, both hemispheres 29.0
1901 Male, age 80, both hemispheres 25.2
2438 Female, age 94, left hemisphere 23.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 35.5
Min nTPM: 11.2
Std nTPM: 4.1
Median nTPM: 18.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 35.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 30.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 29.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 27.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 27.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 27.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 27.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 26.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 26.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 25.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 109.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.8
FF:10153-102I9 76 years, female 128.3
FF:10169-103B7 60 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.4
Pig sample Sample description nTPM
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 25.1
Min nTPM: 21.8
Sample A Female 25.1
Sample B Female 23.8
Sample C Male 21.8
Sample D Male 21.9
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 31.7
Min nTPM: 17.7
Sample A Female 29.6
Sample B Female 22.6
Sample C Male 31.7
Sample D Male 17.7
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.6
Min nTPM: 17.2
Sample A Female 18.0
Sample B Female 21.6
Sample C Male 21.0
Sample D Male 17.2
Ventral hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 25.5
Min nTPM: 20.0
Sample A Female 22.3
Sample B Female 20.0
Sample C Male 25.5
Sample D Male 23.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 25.8
Min nTPM: 19.0
Sample A Male 22.1
Sample B Male 19.0
Sample C Female 25.8
Sample D Female 21.1
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 20.8
Sample A Male 22.1
Sample B Male 21.9
Sample C Female 20.8
Sample D Female 23.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
512990 Antisense, RP_040809_02_F08, Mouse strain C57BL/6J (56 days, male) 17.6
81599646 Antisense, RP_071212_04_F08, Mouse strain C57BL/6J (56 days, male) 4.2

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