HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.3 nTPM
HPA Brain:49.9 nTPM
GTEx:17.3 nTPM
FANTOM5:62.2 Scaled Tags Per Million
Pig:51.7 nTPM
Mouse:62.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 49.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1898 Male, age 80, left hemisphere 36.0
2621 Female, age 67, right hemisphere 32.5
2148 Female, age 91, left hemisphere 30.1
1855 Male, age 76, left hemisphere 28.8
2529 Female, age 94, left hemisphere 26.7
1911 Female, age 85, right hemisphere 25.4
Dentate gyrus
nTPM: 30.6
1927 Female, age 91, both hemispheres 38.4
2010 Male, age 76, both hemispheres 34.3
2531 Female, age 67, both hemispheres 31.9
2246 Female, age 85, both hemispheres 30.1
2530 Female, age 94, left hemisphere 28.9
2528 Male, age 74, both hemispheres 20.1
Entorhinal gyrus
nTPM: 31.2
2613 Female, age 94, left hemisphere 35.6
1787 Male, age 76, left hemisphere 34.1
1938 Female, age 85, left hemisphere 33.9
2764 Male, age 80, right hemisphere 33.3
2686 Male, age 75, right hemisphere 28.4
2117 Female, age 91, right hemisphere 21.6
Hippocampus, CA1
nTPM: 34.5
2749 Male, age 80, left hemisphere 53.6
1873 Female, age 85, both hemispheres 34.5
2045 Male, age 76, both hemispheres 30.8
2527 Male, age 74, both hemispheres 28.1
2082 Female, age 91, right hemisphere 25.7
Hippocampus, CA2
nTPM: 32.0
1892 Male, age 76, both hemispheres 42.0
1963 Male, age 80, left hemisphere 40.2
1940 Female, age 85, left hemisphere 32.7
2437 Female, age 94, left hemisphere 28.1
2113 Female, age 91, right hemisphere 26.0
2249 Male, age 74, both hemispheres 23.0
Hippocampus, CA3
nTPM: 33.0
2137 Male, age 80, left hemisphere 45.5
1867 Male, age 76, both hemispheres 36.9
2861 Female, age 67, both hemispheres 31.5
2436 Male, age 74, both hemispheres 29.1
2620 Female, age 94, left hemisphere 28.8
1891 Female, age 85, both hemispheres 26.4
Parahippocampal cortex
nTPM: 35.8
1850 Male, age 80, both hemispheres 46.6
1933 Female, age 85, both hemispheres 39.1
2245 Female, age 91, both hemispheres 38.7
2532 Female, age 72, left hemisphere 38.4
2622 Female, age 67, right hemisphere 35.1
2018 Male, age 76, both hemispheres 34.9
2693 Female, age 94, both hemispheres 34.7
2250 Female, age 67, right hemisphere 33.8
1990 Female, age 91, right hemisphere 33.1
2692 Male, age 74, both hemispheres 23.8
Perirhinal gyrus
nTPM: 49.9
1841 Female, age 85, right hemisphere 59.6
1794 Male, age 80, right hemisphere 55.3
2521 Female, age 94, right hemisphere 48.5
1847 Female, age 91, left hemisphere 47.1
2848 Male, age 76, right hemisphere 39.1
Subiculum
nTPM: 27.0
2438 Female, age 94, left hemisphere 30.8
1901 Male, age 80, both hemispheres 30.6
1977 Female, age 85, both hemispheres 30.1
2042 Male, age 76, both hemispheres 25.5
2619 Male, age 74, both hemispheres 22.8
2729 Female, age 91, right hemisphere 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.3
Samples: 197

Max nTPM: 52.9
Min nTPM: 5.9
Std nTPM: 9.0
Median nTPM: 14.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 52.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 50.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 48.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 47.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 43.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 41.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 38.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 36.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 33.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 62.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.2
FF:10153-102I9 76 years, female 66.3
FF:10169-103B7 60 years, female 58.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 51.7
Pig sample Sample description nTPM
Subiculum
nTPM: 35.3
Samples: 4

Max nTPM: 40.7
Min nTPM: 33.2
Sample A Female 40.7
Sample B Female 33.4
Sample C Male 33.9
Sample D Male 33.2
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 38.6
Min nTPM: 32.9
Sample A Female 37.9
Sample B Female 37.1
Sample C Male 38.6
Sample D Male 32.9
Entorhinal cortex
nTPM: 51.7
Samples: 4

Max nTPM: 60.9
Min nTPM: 46.9
Sample A Female 46.9
Sample B Female 60.9
Sample C Male 50.8
Sample D Male 48.0
Ventral hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 37.3
Min nTPM: 31.0
Sample A Female 32.7
Sample B Female 31.0
Sample C Male 31.3
Sample D Male 37.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 62.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.5
Samples: 4

Max nTPM: 65.5
Min nTPM: 58.7
Sample A Male 58.7
Sample B Male 65.3
Sample C Female 60.4
Sample D Female 65.5
Hippocampal formation
nTPM: 59.3
Samples: 4

Max nTPM: 68.5
Min nTPM: 53.1
Sample A Male 68.5
Sample B Male 62.2
Sample C Female 53.1
Sample D Female 53.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71283450 Antisense, RP_050825_01_A04, Mouse strain C57BL/6J (56 days, male) 0.5

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