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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL11 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
981.3
Number of samples
349
Samples
Sample
Description
TPM
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
3838.1
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
2997.7
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
2879.2
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2676.4
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
2639.1
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
2561.3
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
2534.5
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
2497.5
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
2351.3
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
2322.2
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
2286.4
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
2263.6
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
2206.7
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
2172.6
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
2146.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
2133.2
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
2127.0
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
2068.7
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1982.5
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1969.4
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1966.6
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1928.7
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1901.2
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1879.2
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
1874.3
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1801.2
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
1778.4
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
1768.9
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1765.9
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1761.1
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1722.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1712.7
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1683.1
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1680.5
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1638.7
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
1618.2
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1612.5
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1602.6
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1569.6
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1549.3
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1543.8
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
1535.2
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1523.4
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1514.7
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1497.3
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1494.2
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1486.9
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1478.4
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1475.4
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1467.8
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1461.3
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
1455.9
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1454.5
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1449.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1440.7
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1420.3
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1403.4
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1400.4
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1397.8
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1383.9
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1376.0
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1362.9
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1361.7
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1350.2
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1349.5
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
1343.3
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1343.2
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
1323.8
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
1310.6
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1294.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
1294.1
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1293.5
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1291.7
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1284.4
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
1284.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1282.1
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1279.5
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1277.8
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1258.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1249.6
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1244.6
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
1242.9
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1232.6
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1228.3
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1223.0
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1206.5
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1203.8
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1200.8
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
1194.9
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1187.1
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1184.2
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1181.9
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1177.5
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1167.4
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1166.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1162.7
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1160.9
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1156.9
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1153.1
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1136.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1132.8
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1129.2
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1128.7
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1123.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1120.7
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1117.8
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1112.3
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1109.9
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1109.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1101.8
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1095.5
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1091.9
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1091.0
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1089.3
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1088.8
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1071.2
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1069.3
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1068.5
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1057.7
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1054.8
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1050.7
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1050.4
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1049.3
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1046.2
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1039.8
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1023.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1020.7
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1020.3
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1015.6
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1012.4
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1005.5
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
999.6
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
998.7
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
990.8
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
985.0
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
977.1
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
970.1
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
967.4
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
964.7
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
955.2
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
951.7
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
946.1
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
935.3
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
934.1
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
932.2
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
930.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
930.3
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
929.4
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
923.1
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
922.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
915.5
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
913.8
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
906.7
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
904.6
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
903.7
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
901.3
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
885.3
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
878.0
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
876.1
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
874.3
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
870.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
866.8
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
863.9
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
860.4
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
858.7
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
853.3
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
852.9
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
851.6
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
848.1
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
847.4
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
845.1
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
844.4
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
843.8
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
840.2
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
836.0
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
834.9
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
831.2
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
829.4
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
825.8
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
821.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
821.4
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
813.5
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
813.4
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
813.4
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
811.9
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
811.9
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
808.3
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
803.1
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
789.0
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
787.5
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
785.4
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
777.1
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
770.1
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
768.4
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
768.0
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
767.4
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
765.0
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
762.3
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
761.4
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
759.9
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
752.1
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
751.2
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
750.4
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
750.1
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
747.3
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
746.9
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
737.9
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
737.7
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
736.6
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
731.0
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
730.2
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
727.5
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
725.6
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
724.3
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
721.0
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
719.3
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
718.2
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
716.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
714.8
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
710.7
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
710.5
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
705.3
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
705.1
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
702.8
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
694.8
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
694.1
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
690.1
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
689.9
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
689.0
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
688.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
687.7
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
681.5
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
679.3
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
678.7
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
677.8
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
676.0
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
674.6
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
672.8
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
671.7
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
671.4
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
671.1
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
670.6
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
669.1
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
667.7
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
666.0
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
665.4
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
664.2
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
660.4
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
659.4
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
655.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
652.7
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
650.9
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
648.8
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
646.8
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
644.0
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
639.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
639.4
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
636.2
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
636.1
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
635.3
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
632.0
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
631.8
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
629.8
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
629.4
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
629.4
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
628.7
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
628.5
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
626.7
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
620.2
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
617.3
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
616.5
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
616.4
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
612.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
609.5
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
607.8
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
602.4
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
601.8
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
600.1
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
593.9
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
588.6
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
587.3
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
584.6
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
584.3
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
579.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
578.5
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
577.3
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
577.1
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
576.0
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
573.8
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
564.8
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
561.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
553.3
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
549.6
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
545.9
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
543.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
542.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
542.6
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
542.4
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
538.5
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
537.2
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
537.0
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
528.4
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
521.4
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
520.9
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
520.4
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
520.4
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
517.7
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
515.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
507.4
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
506.9
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
502.8
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
500.4
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
500.3
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
498.8
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
493.2
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
491.5
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
489.6
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
489.3
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
486.4
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
484.6
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
465.7
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
462.7
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
453.6
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
452.6
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
445.9
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
439.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
439.1
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
433.5
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
432.6
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
417.9
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
415.5
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
411.6
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
404.2
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
399.6
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
393.5
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
393.1
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
390.9
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
387.9
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
381.3
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
376.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
374.1
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
373.7
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
365.4
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
365.3
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
362.1
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
357.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
354.7
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
294.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL11 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2848.0
Number of samples
81
Samples
Sample
Description
TPM
DO46390
0 years, female, NA, stage:III, dead, 374 days
6368.3
DO46384
0 years, female, NA, stage:III, dead, 614 days
6249.1
DO46370
0 years, female, NA, stage:III, dead, 1727 days
5982.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
5747.4
DO46342
0 years, female, NA, stage:III, dead, 1398 days
4807.1
DO46392
0 years, female, NA, stage:III, dead, 628 days
4791.7
DO46380
0 years, female, NA, stage:III, dead, 1423 days
4645.0
DO46333
0 years, female, NA, stage:III, dead, 359 days
4603.1
DO46518
0 years, female, NA, stage:III, alive, 2960 days
4492.8
DO46561
0 years, female, NA, stage:III, dead, 195 days
4468.5
DO46586
0 years, female, NA, stage:III, dead, 1019 days
4463.9
DO46356
0 years, female, NA, stage:III, dead, 911 days
4220.2
DO46591
0 years, female, NA, stage:III, dead, 195 days
4124.2
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
4112.2
DO46581
0 years, female, NA, stage:III, dead, 408 days
3985.6
DO46398
0 years, female, NA, stage:III, alive, 437 days
3765.6
DO46331
0 years, female, NA, stage:III, dead, 612 days
3752.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
3631.4
DO46576
0 years, female, NA, stage:III, alive, 133 days
3617.3
DO46566
0 years, female, NA, stage:III, dead, 673 days
3607.7
DO46538
0 years, female, NA, stage:III, dead, 1527 days
3411.7
DO46364
0 years, female, NA, stage:III, dead, 806 days
3333.0
DO46352
0 years, female, NA, stage:III, dead, 677 days
3277.0
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
3193.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
3156.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
3096.0
DO46408
0 years, female, NA, stage:III, dead, 489 days
3031.6
DO46328
0 years, female, NA, stage:III, dead, 972 days
2969.4
DO46453
0 years, female, NA, stage:III, dead, 3294 days
2938.8
DO46326
0 years, female, NA, stage:III, dead, 701 days
2893.5
DO46508
0 years, female, NA, stage:III, dead, 2101 days
2858.2
DO46560
0 years, female, NA, stage:IV, dead, 286 days
2838.4
DO46376
0 years, female, NA, stage:III, dead, 1430 days
2805.5
DO46400
0 years, female, NA, stage:III, dead, 719 days
2775.3
DO46386
0 years, female, NA, stage:III, dead, 1162 days
2738.8
DO46404
0 years, female, NA, stage:III, dead, 690 days
2716.2
DO46329
0 years, female, NA, stage:III, dead, 1699 days
2676.2
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
2664.2
DO46448
0 years, female, NA, stage:III, dead, 654 days
2647.7
DO46346
0 years, female, NA, stage:III, dead, 1187 days
2603.8
DO46374
0 years, female, NA, stage:III, dead, 1409 days
2593.7
DO46354
0 years, female, NA, stage:III, dead, 843 days
2562.2
DO46372
0 years, female, NA, stage:III, dead, 1326 days
2559.2
DO46350
0 years, female, NA, stage:III, dead, 886 days
2548.9
DO46366
0 years, female, NA, stage:III, dead, 2054 days
2529.3
DO46533
0 years, female, NA, stage:III, alive, 3667 days
2521.8
DO46443
0 years, female, NA, stage:III, dead, 2464 days
2499.2
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
2483.4
DO46568
0 years, female, NA, stage:III, dead, 320 days
2482.7
DO46334
0 years, female, NA, stage:III, dead, 496 days
2481.5
DO46396
0 years, female, NA, stage:III, dead, 583 days
2447.7
DO46330
0 years, female, NA, stage:III, dead, 684 days
2400.1
DO46436
0 years, female, NA, stage:III, alive, 3193 days
2392.3
DO46362
0 years, female, NA, stage:III, dead, 1639 days
2339.4
DO46378
0 years, female, NA, stage:III, alive, 843 days
2324.7
DO46597
0 years, female, NA, stage:III, dead, 393 days
2311.8
DO46412
0 years, female, NA, stage:III, dead, 597 days
2271.4
DO46468
0 years, female, NA, stage:III, alive, 2776 days
2258.1
DO46493
0 years, female, NA, stage:IV, alive, 839 days
2255.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
2231.9
DO46611
0 years, female, NA, stage:III, dead, 734 days
2093.6
DO46551
0 years, female, NA, stage:III, dead, 1055 days
2068.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
1841.8
DO46358
0 years, female, NA, stage:III, dead, 423 days
1777.8
DO46571
0 years, female, NA, stage:III, dead, 243 days
1765.8
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1761.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1674.3
DO46332
0 years, female, NA, stage:III, dead, 689 days
1651.9
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1629.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
1498.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1479.8
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1453.2
DO46606
0 years, female, NA, stage:III, alive, 804 days
1448.0
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1445.4
DO46327
0 years, female, NA, stage:III, dead, 184 days
1434.4
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1410.7
DO46340
0 years, female, NA, stage:III, dead, 616 days
1381.9
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1373.5
DO46344
0 years, female, NA, stage:III, dead, 642 days
1158.9
DO46588
0 years, female, NA, stage:III, dead, 438 days
934.9
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
850.4
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.1
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.3
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.3
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.4
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.5
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.5
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.6
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.6
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.6
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.6
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.7
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.7
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.7
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.7
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.7
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.7
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.7
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.7
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.8
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.8
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.8
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.8
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.8
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.8
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.9
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.9
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.9
15524912-685a-47ce-a824-567848_D2
Tumor
-0.9
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.9
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.9
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-1.0
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-1.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-1.0
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-1.0
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-1.1
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-1.1
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-1.1
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-1.1
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-1.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-1.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.1
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-1.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-1.2
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.2
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.2
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-1.2
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-1.3
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-1.3
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-1.3
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-1.3
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-1.3
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-1.3
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-1.4
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-1.4
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-1.4
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-1.4
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.4
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-1.4
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-1.4
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.4
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-1.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-1.4
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-1.4
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-1.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-1.5
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-1.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-1.5
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-1.5
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-1.5
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.5
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.5
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-1.5
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-1.6
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-1.6
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.6
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-1.6
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-1.6
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.6
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-1.6
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-1.6
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.6
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-1.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-1.6
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-1.7
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-1.7
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.7
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-1.7
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-1.7
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-1.7
285fed94-1495-448e-879b-b55de9_D2
Tumor
-1.7
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-1.7
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-1.7
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-1.7
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-1.7
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-1.8
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-1.8
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.8
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-1.8
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-1.9
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.9
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-1.9
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-2.0
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-2.0
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-2.1
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.