PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		43.002
Mouse brain, Intensity
Ponsi 		107.807
RNA expressioni
HPA Brain:73.9 nTPM
FANTOM5:89.6 Scaled Tags Per Million
Pig:65.9 nTPM
Mouse:32.8 nTPM
Allen mouse:0.6 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA031314
Medulla oblongata mean intensity 43.002
intensityi
FRONT BACK
Nucleus of the solitary tract 43.002
Raphe magnus nucleus 0.757
Cochlear nucleus 1.756
Lateral paragigantocellular nucleus 2.335
Raphe pallidus nucleus 0.183
Facial nucleus 0.094
Hypoglossal nucleus 0.039
Ambiguus nucleus 0.528
External cuneate nucleus 0.893
Inferior olivary nucleus 0.185
Raphe obscures nucleus 0.144
Dorsal motor nucleus of vagus 8.701
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 3.961
Parabrachial nucleus 68.580
Principle sensory trigeminal nucleus 7.542
Locus coeruleus 103.710
Pontine nucleus 0.243
Vestibular nucleus 1.696
Pontine reticular nucleus, oral 0.768
Lateral lemniscus 0.490
Superior paraolivary nucleus 0.443

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 73.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 45.7
2301 Female, age 85, both hemispheres 50.1
2090 Male, age 80, both hemispheres 48.3
2188 Female, age 91, both hemispheres 48.2
1984 Male, age 76, both hemispheres 36.1
Area postrema
nTPM: 64.1
2799 Male, age 61, both hemispheres 96.3
2306 Male, age 80, both hemispheres 49.4
2054 Male, age 76, both hemispheres 46.5
Dorsal cochlear nucleus
nTPM: 49.8
2370 Male, age 61, both hemispheres 53.2
2187 Female, age 91, both hemispheres 51.8
2378 Male, age 80, both hemispheres 48.3
2802 Male, age 74, right hemisphere 47.9
2058 Male, age 76, both hemispheres 47.8
Dorsal medullary reticular nucleus
nTPM: 45.9
2040 Female, age 85, both hemispheres 61.9
2088 Male, age 76, both hemispheres 41.1
2373 Male, age 61, both hemispheres 34.6
Dorsal motor vagal complex
nTPM: 47.5
2813 Female, age 72, unknown 61.1
2000 Male, age 74, unknown 54.1
2844 Male, age 55, unknown 52.9
2133 Female, age 91, both hemispheres 51.4
2643 Male, age 74, both hemispheres 47.6
2807 Female, age 85, both hemispheres 43.0
2185 Male, age 76, both hemispheres 39.3
2797 Male, age 61, both hemispheres 30.4
Dorsal tegmental nucleus
nTPM: 69.9
2358 Male, age 61, both hemispheres 98.0
2083 Male, age 80, both hemispheres 64.4
1936 Male, age 76, left hemisphere 61.2
2326 Male, age 74, both hemispheres 55.9
Dorsolateral tegmental area
nTPM: 60.8
2337 Male, age 61, both hemispheres 70.2
2141 Male, age 76, both hemispheres 59.8
2654 Male, age 80, both hemispheres 59.6
2751 Female, age 85, both hemispheres 57.4
2360 Male, age 74, both hemispheres 56.9
Gigantocellular reticular nuclei, medullary
nTPM: 50.5
1876 Female, age 85, both hemispheres 57.4
2462 Male, age 74, both hemispheres 55.2
2387 Female, age 91, both hemispheres 51.0
2022 Male, age 76, right hemisphere 49.5
2310 Male, age 80, both hemispheres 47.1
2314 Male, age 61, both hemispheres 42.6
Gigantocellular reticular nuclei, pars
nTPM: 49.0
2084 Female, age 85, both hemispheres 56.5
2168 Male, age 76, both hemispheres 53.9
2706 Male, age 80, both hemispheres 49.1
2330 Male, age 80, both hemispheres 46.5
2336 Male, age 61, both hemispheres 38.9
Inferior olive
nTPM: 48.2
2563 Male, age 74, both hemispheres 59.0
2628 Female, age 91, both hemispheres 48.9
2379 Male, age 80, both hemispheres 48.5
2085 Female, age 85, both hemispheres 43.4
2178 Male, age 61, both hemispheres 41.3
Kolliker-Fuse nucleus
nTPM: 60.6
2315 Male, age 76, right hemisphere 67.7
2163 Male, age 80, both hemispheres 62.2
2793 Female, age 91, left hemisphere 52.0
Lateral lemniscal nuclei
nTPM: 50.8
2169 Male, age 76, both hemispheres 60.7
2746 Female, age 85, left hemisphere 51.7
2453 Male, age 74, right hemisphere 48.7
2036 Male, age 80, both hemispheres 47.4
2320 Female, age 91, left hemisphere 45.6
Lateral medullary reticular nucleus
nTPM: 52.5
2305 Male, age 74, both hemispheres 59.7
2044 Male, age 76, both hemispheres 57.8
2852 Male, age 80, both hemispheres 56.1
2804 Female, age 91, both hemispheres 48.4
2190 Female, age 85, both hemispheres 48.2
2374 Male, age 61, both hemispheres 44.7
Lateral parabrachial nucleus
nTPM: 56.3
2139 Female, age 85, right hemisphere 60.1
2013 Male, age 80, both hemispheres 56.3
2792 Male, age 76, both hemispheres 55.8
2790 Male, age 61, both hemispheres 52.8
Lateral vestibular nucleus
nTPM: 56.6
2311 Male, age 80, both hemispheres 58.1
2184 Male, age 76, both hemispheres 55.1
Locus coeruleus
nTPM: 68.4
2123 Female, age 91, both hemispheres 72.2
2788 Male, age 74, unknown 72.0
2014 Male, age 55, unknown 71.1
1980 Male, age 76, both hemispheres 69.9
2317 Female, age 72, unknown 67.9
2720 Male, age 74, both hemispheres 67.3
2162 Male, age 80, both hemispheres 58.8
Medial olivary nucleus
nTPM: 55.9
1943 Male, age 61, both hemispheres 62.0
2851 Male, age 80, both hemispheres 58.6
1962 Male, age 76, both hemispheres 54.3
2138 Female, age 91, both hemispheres 48.9
Medial parabrachial nucleus
nTPM: 57.7
2156 Male, age 61, both hemispheres 62.5
2170 Female, age 91, both hemispheres 61.9
2854 Male, age 80, both hemispheres 60.4
2786 Male, age 76, both hemispheres 54.8
2463 Female, age 85, right hemisphere 48.6
Medial periolivary nuclei
nTPM: 52.9
2791 Male, age 74, right hemisphere 61.2
2171 Female, age 85, both hemispheres 57.9
2063 Male, age 76, both hemispheres 55.9
2081 Male, age 80, both hemispheres 45.2
2458 Female, age 91, both hemispheres 44.6
Medial vestibular nucleus
nTPM: 59.2
2801 Male, age 74, both hemispheres 72.1
2803 Female, age 91, both hemispheres 60.5
2134 Male, age 76, both hemispheres 59.8
2093 Male, age 80, both hemispheres 56.4
2743 Female, age 85, both hemispheres 54.8
2624 Male, age 61, both hemispheres 51.2
Motor facial nucleus
nTPM: 50.7
2365 Male, age 74, right hemisphere 64.5
2062 Male, age 76, both hemispheres 55.4
2795 Female, age 91, both hemispheres 52.0
2697 Female, age 85, both hemispheres 49.9
2327 Male, age 80, both hemispheres 43.3
2126 Male, age 61, both hemispheres 38.9
Motor hypoglossal nucleus
nTPM: 49.3
2182 Male, age 80, both hemispheres 55.1
2125 Female, age 91, both hemispheres 54.5
2132 Female, age 85, both hemispheres 50.1
2277 Male, age 76, both hemispheres 46.7
2461 Male, age 61, both hemispheres 40.1
Motor trigeminal nucleus
nTPM: 50.8
2309 Male, age 76, both hemispheres 55.9
2079 Male, age 80, both hemispheres 53.1
2335 Male, age 61, both hemispheres 51.7
2560 Male, age 74, both hemispheres 51.2
2321 Female, age 91, both hemispheres 42.1
Nuclei of the trapezoid body
nTPM: 51.8
1983 Male, age 76, both hemispheres 57.4
2735 Female, age 85, both hemispheres 57.1
2159 Male, age 61, both hemispheres 56.8
2166 Male, age 80, both hemispheres 46.4
2368 Female, age 91, both hemispheres 41.5
Nucleus ambiguus
nTPM: 52.1
2071 Male, age 76, both hemispheres 53.6
2096 Female, age 85, both hemispheres 50.6
Nucleus cuneatus
nTPM: 47.2
2564 Male, age 74, both hemispheres 62.4
2381 Male, age 80, both hemispheres 55.5
2380 Male, age 80, both hemispheres 55.1
2808 Female, age 85, both hemispheres 47.4
2100 Male, age 76, both hemispheres 43.1
2131 Male, age 76, both hemispheres 42.8
2376 Male, age 61, both hemispheres 41.4
2805 Female, age 91, both hemispheres 40.7
2562 Male, age 61, both hemispheres 36.7
Nucleus gracilis
nTPM: 51.8
2627 Male, age 74, both hemispheres 66.7
2382 Male, age 80, both hemispheres 49.8
2299 Female, age 85, both hemispheres 38.9
Nucleus raphe magnus
nTPM: 53.7
2160 Male, age 61, both hemispheres 63.4
2455 Male, age 74, both hemispheres 59.7
2172 Female, age 85, both hemispheres 58.0
2328 Male, age 80, both hemispheres 51.1
2051 Male, age 76, both hemispheres 47.7
2459 Female, age 91, both hemispheres 42.6
Nucleus raphe obscurus
nTPM: 48.8
2845 Female, age 85, midline 53.3
2142 Male, age 76, midline 50.0
2800 Male, age 61, midline 43.1
Nucleus raphe pallidus
nTPM: 73.9
1924 Male, age 61, midline 110.2
2183 Male, age 80, midline 63.0
2145 Male, age 76, midline 48.4
Nucleus tractus solitarii
nTPM: 44.4
2656 Male, age 76, both hemispheres 46.2
2307 Male, age 80, both hemispheres 44.7
2144 Female, age 91, right hemisphere 44.6
2191 Female, age 85, both hemispheres 42.0
Paramedian reticular nucleus
nTPM: 53.1
2050 Female, age 85, both hemispheres 59.4
2057 Male, age 80, both hemispheres 57.4
2052 Male, age 76, both hemispheres 50.5
2313 Male, age 61, both hemispheres 45.0
Parvicellular reticular nuclei
nTPM: 53.0
2119 Male, age 80, both hemispheres 60.1
2095 Male, age 76, both hemispheres 51.6
2558 Male, age 74, both hemispheres 47.2
Parvicellular reticular nuclei, medullary
nTPM: 54.9
2189 Female, age 91, both hemispheres 58.6
2091 Female, age 85, both hemispheres 55.4
2181 Male, age 80, left hemisphere 50.5
Pedunculopontine tegmental nucleus
nTPM: 63.3
2338 Male, age 61, both hemispheres 67.8
2334 Male, age 80, both hemispheres 64.1
1921 Female, age 85, both hemispheres 58.1
Peritrigeminal nucleus
nTPM: 55.5
2067 Female, age 85, both hemispheres 62.6
2136 Male, age 76, both hemispheres 54.5
2179 Male, age 61, both hemispheres 49.4
Pontine nuclei
nTPM: 59.4
1863 Male, age 55, unknown 84.2
2787 Female, age 85, both hemispheres 71.9
2109 Female, age 72, unknown 63.8
2727 Male, age 61, right hemisphere 63.4
1968 Male, age 76, left hemisphere 49.3
2319 Female, age 91, both hemispheres 47.9
2115 Male, age 80, left hemisphere 47.8
2454 Male, age 74, left hemisphere 47.0
Pontine raphe nucleus
nTPM: 60.8
2853 Male, age 76, midline 65.5
2122 Female, age 85, midline 56.1
Posteroventral cochlear nucleus
nTPM: 49.8
2341 Male, age 80, both hemispheres 56.8
2070 Male, age 76, both hemispheres 51.4
2371 Male, age 61, both hemispheres 50.7
2752 Female, age 85, both hemispheres 49.0
2135 Female, age 91, both hemispheres 41.0
Prepositus hypoglossal nucleus
nTPM: 55.7
2855 Female, age 85, right hemisphere 59.0
2086 Male, age 80, both hemispheres 52.5
Principal sensory trigeminal nucleus
nTPM: 53.9
2158 Male, age 61, both hemispheres 61.8
2324 Male, age 76, both hemispheres 56.6
2008 Male, age 80, left hemisphere 54.6
2367 Female, age 91, left hemisphere 42.6
Reticular pontine nucleus, caudal
nTPM: 50.2
2092 Male, age 76, both hemispheres 59.2
2559 Male, age 74, both hemispheres 48.7
2332 Male, age 80, right hemisphere 47.9
2457 Female, age 91, both hemispheres 45.1
Reticular pontine nucleus, oral
nTPM: 59.2
1939 Male, age 80, both hemispheres 71.4
2167 Male, age 76, both hemispheres 64.8
2361 Male, age 74, both hemispheres 59.4
2012 Female, age 85, both hemispheres 55.0
2366 Female, age 91, both hemispheres 45.5
Reticulotegmental nucleus
nTPM: 51.5
2325 Male, age 76, both hemispheres 57.3
2333 Male, age 80, both hemispheres 52.5
2452 Male, age 74, both hemispheres 48.5
2322 Female, age 91, both hemispheres 47.5
Spinal trigeminal nucleus, caudal
nTPM: 50.1
2642 Male, age 74, both hemispheres 58.7
2390 Female, age 91, both hemispheres 58.5
2308 Male, age 80, both hemispheres 50.5
2447 Male, age 76, both hemispheres 44.9
2312 Male, age 61, both hemispheres 38.2
Spinal trigeminal nucleus, interpolar
nTPM: 58.4
2625 Male, age 61, both hemispheres 67.1
2066 Male, age 76, right hemisphere 61.6
2033 Male, age 80, both hemispheres 56.8
2389 Female, age 91, both hemispheres 55.4
2386 Female, age 85, both hemispheres 51.0
Spinal trigeminal nucleus, oral
nTPM: 49.5
2164 Male, age 80, both hemispheres 54.5
2737 Female, age 85, both hemispheres 50.8
1978 Male, age 76, both hemispheres 43.3
Spinal vestibular nucleus
nTPM: 54.1
2186 Female, age 91, both hemispheres 57.8
2748 Male, age 76, both hemispheres 57.2
2780 Male, age 80, both hemispheres 56.4
2806 Female, age 85, both hemispheres 54.6
2384 Male, age 74, both hemispheres 50.3
2796 Male, age 61, both hemispheres 48.5
Subcoeruleus area
nTPM: 55.2
1958 Male, age 80, both hemispheres 60.4
2323 Female, age 91, left hemisphere 59.9
2369 Female, age 85, left hemisphere 56.4
2451 Male, age 74, both hemispheres 51.0
2089 Male, age 76, left hemisphere 48.4
Superior olive
nTPM: 52.6
2364 Male, age 74, right hemisphere 61.6
1875 Female, age 85, both hemispheres 58.6
2020 Male, age 76, both hemispheres 52.6
2329 Male, age 80, right hemisphere 48.4
2561 Female, age 91, both hemispheres 42.1
Superior vestibular nucleus
nTPM: 58.1
2383 Male, age 74, both hemispheres 61.3
2061 Male, age 76, both hemispheres 57.2
2015 Male, age 80, both hemispheres 55.7
Ventral medullary reticular nucleus
nTPM: 42.0
2060 Male, age 76, both hemispheres 50.1
2372 Male, age 61, both hemispheres 34.0
Ventral periolivary nuclei
nTPM: 53.1
2130 Female, age 85, both hemispheres 58.6
2165 Male, age 80, both hemispheres 58.1
2023 Male, age 76, both hemispheres 53.4
2794 Female, age 91, left hemisphere 42.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 49.6
2741 Female, age 85, both hemispheres 54.6
1986 Male, age 76, both hemispheres 52.5
2118 Male, age 80, both hemispheres 49.5
2302 Female, age 91, both hemispheres 48.2
2180 Male, age 61, both hemispheres 43.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 55.0
2359 Male, age 61, both hemispheres 72.8
2840 Female, age 85, both hemispheres 55.8
1959 Male, age 76, both hemispheres 54.6
2161 Male, age 80, both hemispheres 52.4
2449 Male, age 74, both hemispheres 52.3
2456 Female, age 91, both hemispheres 42.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 47.9
FF:10182-103D2 60 years, female 54.1
FF:10165-103B3 76 years, female 41.7
Medulla oblongata
Scaled Tags Per Million: 53.1
FF:10038-101F2 18-64 years, mixed 70.3
FF:10174-103C3 60 years, female 54.6
FF:10155-103A2 76 years, female 34.6
Pons
Scaled Tags Per Million: 89.6
FF:10033-101E6 18-54 years, mixed 89.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 65.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 65.9
Samples: 4

Max nTPM: 73.3
Min nTPM: 58.2
Sample A Female 58.2
Sample B Female 59.5
Sample C Male 72.4
Sample D Male 73.3
Pons
nTPM: 61.1
Samples: 4

Max nTPM: 64.5
Min nTPM: 56.1
Sample A Female 62.1
Sample B Female 56.1
Sample C Male 64.5
Sample D Male 61.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 32.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 32.8
Samples: 4

Max nTPM: 34.5
Min nTPM: 31.3
Sample A Male 32.8
Sample B Male 32.5
Sample C Female 34.5
Sample D Female 31.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.6
70918988 Antisense, RP_050712_04_H08, Mouse strain C57BL/6J (56 days, male) 0.7
633689 Antisense, RP_040907_02_B09, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.4
70918988 Antisense, RP_050712_04_H08, Mouse strain C57BL/6J (56 days, male) 0.5
633689 Antisense, RP_040907_02_B09, Mouse strain C57BL/6J (56 days, male) 0.4

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