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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
240.9
nTPM
GTEx:
240.9
nTPM
FANTOM5:
260.8
Scaled Tags Per Million
Pig:
37.0
nTPM
Mouse:
508.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
240.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 240.9
Samples: 105
Max nTPM: 323.7
Min nTPM: 181.9
Std nTPM: 31.0
Median nTPM:
491_1
89 years, female
323.7
501_1
88 years, male
319.7
413_1
59 years, female
311.4
315_1
62 years, female
307.5
142_1
61 years, female
306.6
506_1
65 years, male
302.3
99_1
64 years, male
300.9
109_1
81 years, female
296.0
42_1
85 years, male
294.9
120_1
70 years, female
293.5
153_1
70 years, female
292.0
17_1
71 years, male
281.7
379_1
60 years, male
279.0
452_1
88 years, female
278.7
4_1
88 years, female
275.8
414_1
84 years, female
271.0
162_1
79 years, female
269.6
119_1
70 years, female
267.8
126_1
63 years, male
266.6
35_1
74 years, female
266.1
243_1
75 years, male
265.1
139_1
64 years, female
262.8
321_1
62 years, female
261.4
396_1
62 years, male
261.2
2_1
77 years, female
259.9
254_1
77 years, female
258.2
351_1
91 years, male
257.8
265_1
87 years, male
256.6
81_1
67 years, male
256.1
145_1
84 years, male
255.9
490_1
67 years, female
255.4
115_1
83 years, male
254.5
313_1
79 years, female
252.3
117_1
61 years, male
251.0
6_1
73 years, female
250.9
9_1
66 years, female
250.8
288_1
66 years, female
250.7
377_1
82 years, female
248.7
415_1
77 years, female
248.2
18_1
88 years, male
247.2
376_1
75 years, female
247.0
447_1
81 years, male
245.5
319_1
81 years, male
245.2
404_1
82 years, female
245.1
324_1
76 years, male
243.2
386_1
76 years, male
243.1
314_1
67 years, male
243.0
177_1
74 years, male
242.0
229_1
69 years, female
241.7
375_1
74 years, female
240.7
43_1
64 years, female
239.5
322_1
76 years, male
239.5
466_1
57 years, female
239.2
89_1
63 years, male
237.8
149_1
88 years, male
237.8
137_1
83 years, male
235.1
189_1
76 years, male
235.1
173_1
67 years, male
234.6
32_1
67 years, male
234.5
295_1
61 years, female
232.4
266_1
85 years, male
232.3
264_1
73 years, female
231.7
480_1
63 years, male
231.5
499_1
55 years, female
229.8
518_1
75 years, female
227.7
356_1
87 years, female
227.6
353_1
82 years, female
224.5
354_1
81 years, female
223.4
384_1
83 years, male
222.3
394_1
75 years, female
222.3
316_1
62 years, male
222.2
526_1
61 years, male
220.7
246_1
77 years, male
220.1
163_1
78 years, male
220.0
286_1
68 years, female
219.5
468_1
89 years, male
219.3
217_1
76 years, male
217.4
349_1
83 years, male
217.1
320_1
89 years, female
216.8
308_1
70 years, female
216.3
311_1
78 years, male
216.3
41_1
94 years, female
215.0
348_1
84 years, male
214.7
352_1
62 years, male
214.3
517_1
88 years, male
213.5
307_1
66 years, female
212.5
347_1
72 years, male
212.4
389_1
86 years, female
212.1
317_1
60 years, male
210.3
335_1
73 years, female
210.3
503_1
68 years, male
208.7
237_1
82 years, male
208.2
318_1
68 years, male
207.6
495_1
57 years, female
206.9
406_1
79 years, male
204.6
172_1
72 years, female
204.0
218_1
71 years, female
203.4
291_1
76 years, male
202.2
293_1
68 years, female
199.4
355_1
70 years, female
199.1
350_1
84 years, female
198.3
292_1
71 years, male
193.3
251_1
78 years, male
189.3
405_1
91 years, male
185.2
425_1
59 years, female
181.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.