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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFNAR1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
66.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
47.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
45.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
42.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
41.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
41.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
41.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
39.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
39.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
37.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
37.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
36.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
36.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
36.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
35.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
35.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
35.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
35.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
34.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
34.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
34.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
34.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
34.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
34.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
33.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
33.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
32.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
32.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
32.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
32.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
32.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
32.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
32.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
31.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
31.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
31.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
31.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
31.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
31.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
30.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
30.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
29.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
29.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
29.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
29.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
29.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
29.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
29.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
29.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
29.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
29.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
28.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
28.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
28.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
27.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
27.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
27.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
27.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
27.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
27.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
27.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
26.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
26.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
26.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
26.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
26.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
26.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
26.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
26.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
26.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
26.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
26.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
25.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
25.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
25.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
25.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
25.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
25.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
25.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
25.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
25.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
25.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
24.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
24.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
24.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
24.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
24.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
24.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
24.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
24.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
24.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
24.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
23.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
23.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
23.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
23.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
23.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
23.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
23.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
23.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
23.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
23.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
23.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
23.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
22.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
22.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
22.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
22.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
22.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
22.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
22.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
22.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
22.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
22.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
22.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
22.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
22.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
22.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
21.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
21.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
21.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
21.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
21.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
21.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
21.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
21.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
21.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
21.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
21.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
21.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
21.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
21.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
21.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
20.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
20.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
20.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
20.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
20.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
20.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
20.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
20.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
20.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
20.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
20.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
19.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
19.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
19.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
19.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
19.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
19.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
19.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
19.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
19.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
19.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
19.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
19.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
18.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
18.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
18.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
18.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
18.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
18.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
18.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
18.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
18.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
18.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
18.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
18.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
18.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
18.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
18.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
18.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
18.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
18.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
17.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
17.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
17.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
17.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
17.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
17.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
17.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
17.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
17.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
17.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
17.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
17.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
17.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
17.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
17.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
16.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
16.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
16.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
16.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
16.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
16.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
15.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
15.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
15.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
15.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
15.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
15.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
15.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
15.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
15.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
15.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
15.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
14.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
14.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
14.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
14.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
14.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
14.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
14.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
14.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
14.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
14.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
13.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
13.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
13.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
13.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
13.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
13.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
13.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
13.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
13.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
13.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
13.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
13.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
13.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
13.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
13.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
12.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
12.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
12.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
12.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
12.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
12.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
12.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
12.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
12.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
12.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
11.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
11.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
11.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
11.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
11.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
11.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
11.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
11.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
11.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
10.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
10.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
10.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
10.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
10.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
9.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
8.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
8.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
8.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
7.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
7.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFNAR1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
231
Samples
Sample
Description
TPM
DO45137
0 years, male, NA, stage:1, alive, 1320 days
27.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
24.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
24.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
23.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
23.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
23.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
21.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
21.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
21.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
20.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
19.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
19.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
19.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
19.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
18.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
18.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
17.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
17.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
17.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
17.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
17.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
16.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
16.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
16.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
16.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
16.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
15.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
15.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
15.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
15.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
15.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
14.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
14.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
14.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
14.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
14.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
14.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
14.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
14.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
14.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
13.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
13.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
13.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
13.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
13.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
13.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
13.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
13.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
13.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
12.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
12.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
12.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
12.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
12.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
11.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
11.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
11.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
10.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
10.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
10.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
10.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
10.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
10.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
10.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
10.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
10.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
10.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
10.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
9.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
9.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
9.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
9.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
8.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
8.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
7.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
6.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
5.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
1.4
863
Tumor
0.9
1041
Tumor
0.9
721
Tumor
0.8
1025
Tumor
0.7
515
Tumor
0.7
857
Tumor
0.7
964
Normal
0.6
958
Normal
0.6
914
Normal
0.5
978
Normal
0.5
513
Tumor
0.5
983
Tumor
0.5
864
Normal
0.5
444
Normal
0.4
554
Normal
0.4
525
Tumor
0.4
434
Normal
0.3
436
Normal
0.3
223
Tumor
0.3
714
Normal
0.3
446
Normal
0.3
976
Normal
0.3
432
Normal
0.3
968
Normal
0.3
696
Normal
0.3
823
Tumor
0.3
874
Normal
0.2
868
Normal
0.2
1028
Normal
0.2
445
Tumor
0.2
881
Tumor
0.2
722
Normal
0.2
526
Normal
0.2
966
Normal
0.2
716
Normal
0.2
1027
Tumor
0.2
1022
Normal
0.2
695
Tumor
0.2
211
Tumor
0.2
462
Normal
0.1
642
Normal
0.1
534
Normal
0.1
433
Tumor
0.1
867
Tumor
0.1
713
Tumor
0.1
285
Tumor
0.1
518
Normal
0.1
344
Normal
0.1
524
Normal
0.1
685
Tumor
0.1
286
Normal
0.1
514
Normal
0.1
1032
Normal
0.1
984
Normal
0.1
212
Normal
0.1
817
Tumor
0.1
477
Tumor
0.1
516
Normal
0.1
478
Normal
0.1
435
Tumor
0.0
862
Normal
0.0
883
Tumor
0.0
1014
Normal
0.0
877
Tumor
0.0
884
Normal
0.0
1031
Tumor
0.0
218
Normal
0.0
1016
Normal
0.0
967
Tumor
0.0
911
Tumor
0.0
686
Normal
0.0
228
Normal
0.0
482
Normal
0.0
517
Tumor
0.0
343
Tumor
0.0
715
Tumor
0.0
818
Normal
-0.1
431
Tumor
-0.1
213
Tumor
-0.1
283
Tumor
-0.1
963
Tumor
-0.1
358
Normal
-0.1
878
Normal
-0.1
471
Tumor
-0.1
284
Normal
-0.1
224
Normal
-0.1
616
Normal
-0.1
866
Normal
-0.1
546
Normal
-0.1
975
Tumor
-0.1
553
Tumor
-0.1
977
Tumor
-0.1
627
Tumor
-0.1
1015
Tumor
-0.1
461
Tumor
-0.1
443
Tumor
-0.1
912
Normal
-0.1
882
Normal
-0.1
617
Tumor
-0.1
195
Tumor
-0.1
528
Normal
-0.1
641
Tumor
-0.2
1042
Normal
-0.2
1021
Tumor
-0.2
217
Tumor
-0.2
858
Normal
-0.2
353
Tumor
-0.2
523
Tumor
-0.2
227
Tumor
-0.2
635
Tumor
-0.2
527
Tumor
-0.2
221
Tumor
-0.2
474
Normal
-0.2
352
Normal
-0.2
982
Normal
-0.2
873
Tumor
-0.2
615
Tumor
-0.3
545
Tumor
-0.3
191
Tumor
-0.3
965
Tumor
-0.3
824
Normal
-0.3
354
Normal
-0.3
538
Normal
-0.3
981
Tumor
-0.3
341
Tumor
-0.3
815
Tumor
-0.3
342
Normal
-0.3
357
Tumor
-0.3
222
Normal
-0.3
472
Normal
-0.3
196
Normal
-0.4
861
Tumor
-0.4
851
Tumor
-0.4
214
Normal
-0.4
1026
Normal
-0.4
913
Tumor
-0.4
628
Normal
-0.4
192
Normal
-0.5
618
Normal
-0.5
636
Normal
-0.5
481
Tumor
-0.6
957
Tumor
-0.6
865
Tumor
-0.7
852
Normal
-0.7
537
Tumor
-0.8
1013
Tumor
-0.8
816
Normal
-0.9
351
Tumor
-0.9
473
Tumor
-0.9
231
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
937
Tumor
N/A
938
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
944
Normal
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
737
Tumor
N/A
738
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
1045
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
755
Tumor
N/A
756
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
564
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
455
Tumor
N/A
697
Tumor
N/A
456
Normal
N/A
698
Normal
N/A
463
Tumor
N/A
464
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
