Expression of PLPP2 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PLPP2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 36.55

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

24.2

Number of samples

362

Samples

Sample	Description	TPM
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	403.9
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	307.9
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	277.2
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	259.2
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	257.2
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	225.1
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	220.8
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	196.7
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	195.1
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	176.9
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	168.1
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	161.0
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	152.8
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	151.6
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	130.8
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	129.2
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	116.3
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	115.1
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	108.4
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	107.0
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	101.1
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	99.0
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	94.4
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	91.5
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	89.7
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	85.1
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	84.3
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	80.9
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	79.5
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	78.4
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	75.6
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	74.7
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	74.4
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	73.9
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	72.0
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	71.8
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	66.8
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	65.8
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	64.6
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	63.7
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	63.2
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	62.9
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	62.4
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	60.5
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	57.5
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	54.4
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	53.9
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	53.6
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	52.1
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	51.3
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	51.0
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	49.9
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	49.8
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	48.0
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	47.7
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	47.7
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	47.3
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	47.0
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	45.9
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	44.7
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	44.6
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	43.8
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	43.6
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	43.3
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	43.1
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	42.9
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	42.4
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	42.1
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	41.0
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	40.8
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	40.2
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	39.3
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	38.6
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	38.0
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	37.4
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	37.2
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	35.9
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	35.4
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	35.0
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	34.8
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	32.2
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	32.1
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	32.0
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	32.0
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	31.7
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	31.5
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	31.4
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	30.4
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	29.9
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	29.4
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	29.0
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	28.9
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	27.7
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	27.4
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	27.2
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	26.2
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	25.7
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	25.2
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	25.1
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	25.1
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	24.4
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	24.2
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	23.4
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	23.1
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	22.9
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	22.6
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	21.9
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	21.2
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	21.1
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	20.7
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	20.2
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	19.8
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	19.6
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	19.3
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	19.0
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	18.4
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	17.3
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	16.8
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	15.9
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	15.8
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	15.2
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	14.6
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	12.7
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	12.3
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	12.1
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	12.1
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	11.8
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	11.7
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	11.6
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	11.2
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	11.0
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	10.9
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	10.7
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	9.6
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	9.6
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	9.6
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	9.4
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	8.9
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	8.9
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	8.6
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	8.5
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	8.4
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	7.4
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	7.1
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	7.0
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	6.7
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	5.0
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	5.0
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	4.9
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	4.9
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	4.6
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	4.6
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	4.6
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	4.5
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	4.4
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	4.4
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	4.4
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	4.3
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	4.2
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	4.1
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	4.0
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	4.0
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	3.9
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	3.8
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	3.7
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	3.6
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	3.3
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	3.2
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	3.0
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	3.0
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	3.0
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	2.9
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	2.9
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	2.8
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	2.7
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	2.7
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	2.6
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	2.5
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	2.4
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	2.4
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	2.3
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	2.2
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	2.2
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	2.1
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	2.1
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	2.0
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	1.8
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	1.8
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	1.7
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	1.7
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	1.7
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	1.6
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	1.6
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	1.5
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	1.4
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	1.3
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	1.3
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	1.3
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	1.2
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	1.2
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	1.2
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	1.2
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	1.2
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	1.2
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	1.1
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	1.1
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	1.1
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	1.1
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	1.1
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	1.1
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	1.1
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	1.1
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	1.0
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	1.0
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	1.0
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	1.0
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	1.0
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	1.0
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	0.9
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	0.9
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	0.9
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	0.9
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	0.8
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	0.8
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	0.8
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	0.8
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	0.8
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	0.7
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	0.7
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	0.7
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	0.7
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	0.7
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	0.7
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	0.7
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	0.7
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	0.7
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	0.7
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	0.7
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	0.6
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	0.6
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	0.6
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	0.6
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	0.6
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	0.6
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	0.6
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	0.6
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	0.6
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	0.5
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	0.5
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	0.5
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	0.5
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	0.5
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	0.5
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	0.5
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	0.5
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	0.5
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	0.5
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	0.5
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	0.5
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	0.5
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	0.5
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	0.5
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	0.5
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	0.5
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	0.5
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	0.4
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	0.4
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	0.4
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	0.4
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	0.4
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	0.4
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	0.4
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	0.4
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	0.4
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	0.4
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	0.4
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	0.4
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	0.4
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	0.4
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	0.4
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	0.3
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	0.3
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	0.3
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	0.3
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	0.3
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	0.3
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	0.3
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	0.3
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	0.3
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	0.3
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	0.3
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	0.3
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	0.3
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	0.3
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	0.3
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	0.3
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	0.3
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	0.3
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	0.3
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	0.3
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	0.3
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	0.3
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	0.2
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	0.2
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	0.2
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	0.2
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	0.2
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	0.2
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	0.2
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	0.2
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	0.2
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	0.2
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	0.2
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	0.2
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	0.2
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	0.2
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	0.2
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	0.2
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	0.2
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	0.2
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	0.2
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	0.2
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	0.2
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	0.2
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	0.2
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	0.1
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	0.1
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	0.1
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	0.1
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	0.1
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	0.1
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	0.1
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	0.1
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	0.1
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	0.1
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	0.1
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	0.1
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	0.1
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	0.1
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	0.1
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	0.1
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	0.1
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	0.1
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	0.1
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	0.1
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	0.1
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	0.1
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	0.1
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	0.1
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	0.1
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	0.0
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	0.0
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	0.0
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	0.0
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	0.0
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	0.0
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	0.0
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	0.0
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	0.0
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	0.0
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	0.0
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	0.0
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
697	Tumor	3.1
343	Tumor	2.8
395	Tumor	2.7
447	Tumor	2.4
573	Tumor	2.3
661	Tumor	2.2
367	Tumor	1.9
455	Tumor	1.9
823	Tumor	1.9
567	Tumor	1.7
471	Tumor	1.7
525	Tumor	1.6
1027	Tumor	1.4
523	Tumor	1.3
351	Tumor	1.3
331	Tumor	1.2
925	Tumor	1.2
647	Tumor	1.1
393	Tumor	1.1
913	Tumor	1.1
921	Tumor	1.0
533	Tumor	0.9
491	Tumor	0.9
571	Tumor	0.9
478	Normal	0.8
483	Tumor	0.8
951	Tumor	0.8
527	Tumor	0.7
883	Tumor	0.7
953	Tumor	0.7
487	Tumor	0.6
545	Tumor	0.6
574	Normal	0.6
312	Normal	0.6
881	Tumor	0.6
1031	Tumor	0.5
563	Tumor	0.5
665	Tumor	0.4
1021	Tumor	0.4
672	Normal	0.4
671	Tumor	0.4
564	Normal	0.4
524	Normal	0.4
518	Normal	0.4
666	Normal	0.4
558	Normal	0.4
966	Normal	0.3
514	Normal	0.3
648	Normal	0.3
516	Normal	0.3
461	Tumor	0.3
278	Normal	0.3
497	Tumor	0.3
515	Tumor	0.3
662	Normal	0.3
386	Normal	0.2
912	Normal	0.2
513	Tumor	0.2
526	Normal	0.2
968	Normal	0.2
976	Normal	0.2
384	Normal	0.2
914	Normal	0.2
396	Normal	0.2
568	Normal	0.2
388	Normal	0.1
817	Tumor	0.1
536	Normal	0.1
923	Tumor	0.1
956	Normal	0.1
1046	Normal	0.1
572	Normal	0.1
664	Normal	0.1
277	Tumor	0.1
535	Tumor	0.1
492	Normal	0.0
537	Tumor	0.0
332	Normal	0.0
394	Normal	0.0
498	Normal	0.0
392	Normal	0.0
884	Normal	0.0
557	Tumor	0.0
958	Normal	0.0
484	Normal	0.0
954	Normal	0.0
494	Normal	0.0
298	Normal	-0.1
938	Normal	-0.1
474	Normal	-0.1
944	Normal	-0.1
975	Tumor	-0.1
857	Tumor	-0.1
698	Normal	-0.1
816	Normal	-0.1
538	Normal	-0.1
488	Normal	-0.1
472	Normal	-0.1
462	Normal	-0.1
663	Tumor	-0.1
314	Normal	-0.1
1025	Tumor	-0.2
964	Normal	-0.2
882	Normal	-0.2
1045	Tumor	-0.2
916	Normal	-0.2
943	Tumor	-0.2
366	Normal	-0.2
482	Normal	-0.2
448	Normal	-0.2
963	Tumor	-0.2
858	Normal	-0.2
1042	Normal	-0.2
1032	Normal	-0.2
383	Tumor	-0.3
877	Tumor	-0.3
493	Tumor	-0.3
917	Tumor	-0.3
1044	Normal	-0.3
1028	Normal	-0.3
852	Normal	-0.3
924	Normal	-0.3
344	Normal	-0.3
357	Tumor	-0.3
362	Normal	-0.3
937	Tumor	-0.3
878	Normal	-0.3
952	Normal	-0.3
967	Tumor	-0.4
387	Tumor	-0.4
361	Tumor	-0.4
824	Normal	-0.4
481	Tumor	-0.4
466	Normal	-0.4
297	Tumor	-0.4
955	Tumor	-0.4
815	Tumor	-0.4
818	Normal	-0.4
391	Tumor	-0.4
1022	Normal	-0.4
368	Normal	-0.4
965	Tumor	-0.4
546	Normal	-0.5
517	Tumor	-0.5
918	Normal	-0.5
724	Normal	-0.5
354	Normal	-0.5
456	Normal	-0.5
534	Normal	-0.5
528	Normal	-0.5
911	Tumor	-0.5
352	Normal	-0.5
385	Tumor	-0.5
728	Normal	-0.5
342	Normal	-0.5
1026	Normal	-0.6
554	Normal	-0.6
915	Tumor	-0.6
452	Normal	-0.6
744	Normal	-0.6
957	Tumor	-0.6
473	Tumor	-0.6
926	Normal	-0.7
341	Tumor	-0.7
376	Normal	-0.7
723	Tumor	-0.7
468	Normal	-0.7
922	Normal	-0.7
365	Tumor	-0.8
464	Normal	-0.8
353	Tumor	-0.8
358	Normal	-0.8
451	Tumor	-0.8
313	Tumor	-0.8
738	Normal	-0.8
553	Tumor	-0.9
311	Tumor	-0.9
742	Normal	-0.9
737	Tumor	-1.1
477	Tumor	-1.1
375	Tumor	-1.2
465	Tumor	-1.2
1041	Tumor	-1.2
467	Tumor	-1.2
741	Tumor	-1.3
1043	Tumor	-1.3
851	Tumor	-1.3
727	Tumor	-1.6
463	Tumor	-1.7
743	Tumor	-1.8
231	Tumor	N/A
111	Normal	N/A
232	Normal	N/A
112	Tumor	N/A
113	Tumor	N/A
355	Tumor	N/A
114	Normal	N/A
356	Normal	N/A
363	Tumor	N/A
364	Normal	N/A
123	Tumor	N/A
124	Normal	N/A
125	Tumor	N/A
126	Normal	N/A
127	Tumor	N/A
128	Normal	N/A
131	Tumor	N/A
132	Normal	N/A
135	Tumor	N/A
136	Normal	N/A
257	Tumor	N/A
137	Tumor	N/A
258	Normal	N/A
138	Normal	N/A
813	Tumor	N/A
814	Normal	N/A
261	Tumor	N/A
141	Tumor	N/A
262	Normal	N/A
142	Normal	N/A
145	Tumor	N/A
146	Normal	N/A
267	Tumor	N/A
147	Tumor	N/A
268	Normal	N/A
148	Normal	N/A
271	Tumor	N/A
272	Normal	N/A
1016	Normal	N/A
1015	Tumor	N/A
1014	Normal	N/A
1013	Tumor	N/A
713	Tumor	N/A
714	Normal	N/A
715	Tumor	N/A
716	Normal	N/A
161	Tumor	N/A
162	Normal	N/A
283	Tumor	N/A
284	Normal	N/A
285	Tumor	N/A
286	Normal	N/A
721	Tumor	N/A
722	Normal	N/A
171	Tumor	N/A
172	Normal	N/A
977	Tumor	N/A
615	Tumor	N/A
978	Normal	N/A
616	Normal	N/A
617	Tumor	N/A
618	Normal	N/A
185	Tumor	N/A
186	Normal	N/A
187	Tumor	N/A
188	Normal	N/A
981	Tumor	N/A
861	Tumor	N/A
982	Normal	N/A
862	Normal	N/A
983	Tumor	N/A
863	Tumor	N/A
984	Normal	N/A
864	Normal	N/A
865	Tumor	N/A
745	Tumor	N/A
866	Normal	N/A
746	Normal	N/A
867	Tumor	N/A
868	Normal	N/A
627	Tumor	N/A
628	Normal	N/A
191	Tumor	N/A
192	Normal	N/A
195	Tumor	N/A
196	Normal	N/A
873	Tumor	N/A
874	Normal	N/A
755	Tumor	N/A
635	Tumor	N/A
756	Normal	N/A
636	Normal	N/A
641	Tumor	N/A
642	Normal	N/A
411	Tumor	N/A
412	Normal	N/A
413	Tumor	N/A
414	Normal	N/A
777	Tumor	N/A
415	Tumor	N/A
778	Normal	N/A
416	Normal	N/A
421	Tumor	N/A
422	Normal	N/A
785	Tumor	N/A
423	Tumor	N/A
786	Normal	N/A
424	Normal	N/A
425	Tumor	N/A
426	Normal	N/A
427	Tumor	N/A
428	Normal	N/A
431	Tumor	N/A
432	Normal	N/A
433	Tumor	N/A
434	Normal	N/A
435	Tumor	N/A
436	Normal	N/A
443	Tumor	N/A
685	Tumor	N/A
444	Normal	N/A
686	Normal	N/A
445	Tumor	N/A
446	Normal	N/A
327	Tumor	N/A
328	Normal	N/A
211	Tumor	N/A
695	Tumor	N/A
212	Normal	N/A
696	Normal	N/A
213	Tumor	N/A
214	Normal	N/A
217	Tumor	N/A
218	Normal	N/A
221	Tumor	N/A
222	Normal	N/A
223	Tumor	N/A
224	Normal	N/A
227	Tumor	N/A
228	Normal	N/A
Show allShow less

LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA055540
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS