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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
139.4
nTPM
HPA Brain:
51.4
nTPM
GTEx:
139.4
nTPM
FANTOM5:
107.4
Scaled Tags Per Million
Pig:
24.4
nTPM
Mouse:
9.9
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
51.4
Sample id
Sample description
nTPM
Amygdala nTPM: 50.6
2814
Male, age 76, right hemisphere
58.8
2514
Male, age 75, right hemisphere
55.6
2695
Female, age 67, right hemisphere
47.2
1987
Female, age 91, left hemisphere
46.5
2517
Female, age 94, left hemisphere
45.1
Basal amygdala nTPM: 48.7
2685
Female, age 94, left hemisphere
54.0
2110
Male, age 80, left hemisphere
51.7
2243
Female, age 91, right hemisphere
50.5
2827
Female, age 67, right hemisphere
45.6
2609
Male, age 75, right hemisphere
45.3
1955
Male, age 76, both hemispheres
45.2
Central amygdala nTPM: 51.4
2826
Female, age 94, left hemisphere
59.9
1905
Male, age 76, both hemispheres
57.7
2515
Male, age 75, right hemisphere
51.4
2239
Male, age 80, left hemisphere
50.8
2701
Female, age 91, right hemisphere
37.3
Corticomedial amygdala nTPM: 50.5
2829
Male, age 80, left hemisphere
58.5
2242
Female, age 91, right hemisphere
56.6
2429
Female, age 94, left hemisphere
52.7
2428
Male, age 75, right hemisphere
49.0
2240
Male, age 76, both hemispheres
48.0
2535
Female, age 67, right hemisphere
38.5
Lateral amygdala nTPM: 49.5
2534
Female, age 94, left hemisphere
58.1
1883
Male, age 76, both hemispheres
53.3
2516
Male, age 75, right hemisphere
52.3
2256
Male, age 80, left hemisphere
46.8
2830
Female, age 67, right hemisphere
43.3
2255
Female, age 91, right hemisphere
42.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
139.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 139.4
Samples: 152
Max nTPM: 410.6
Min nTPM: 44.8
Std nTPM: 49.5
Median nTPM: 129.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
410.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
384.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
309.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
292.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
232.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
224.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
223.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
221.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
221.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
217.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
201.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
200.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
199.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
196.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
192.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
190.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
186.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
184.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
183.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
182.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
182.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
178.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
177.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
174.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
173.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
172.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
167.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
167.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
165.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
164.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
163.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
163.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
159.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
158.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
157.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
155.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
154.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
154.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
152.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
151.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
151.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
151.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
149.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
149.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
148.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
148.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
147.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
147.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
147.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
147.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
145.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
144.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
144.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
144.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
144.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
144.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
143.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
142.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
141.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
141.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
141.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
140.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
140.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
140.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
139.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
139.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
134.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
134.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
134.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
132.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
131.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
130.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
129.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
129.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
129.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
129.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
129.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
129.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
128.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
128.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
128.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
128.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
128.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
127.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
126.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
125.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
125.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
125.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
125.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
125.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
124.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
124.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
123.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
121.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
121.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
120.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
119.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
119.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
119.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
118.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
118.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
118.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
118.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
117.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
117.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
116.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
116.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
115.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
115.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
114.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
114.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
113.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
112.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
110.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
110.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
110.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
109.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
109.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
108.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
108.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
107.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
107.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
106.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
104.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
104.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
104.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
103.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
103.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
102.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
101.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
100.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
97.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
96.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
96.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
94.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
92.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
91.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
90.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
87.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
87.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
87.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
87.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
81.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
79.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
78.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
77.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
76.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
75.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
75.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
74.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
72.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
44.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 9.9
Samples: 4
Max nTPM: 11.8
Min nTPM: 8.8
Sample A
Male
9.4
Sample B
Male
8.8
Sample C
Female
11.8
Sample D
Female
9.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.