HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.7 nTPM
HPA Brain:20.7 nTPM
GTEx:53.7 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:66.9 nTPM
Mouse:177.8 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061344
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
2621 Female, age 67, right hemisphere 23.4
1898 Male, age 80, left hemisphere 20.8
1855 Male, age 76, left hemisphere 20.7
2148 Female, age 91, left hemisphere 18.9
1911 Female, age 85, right hemisphere 18.8
2529 Female, age 94, left hemisphere 17.9
Dentate gyrus
nTPM: 18.5
2530 Female, age 94, left hemisphere 25.3
2010 Male, age 76, both hemispheres 20.7
1927 Female, age 91, both hemispheres 18.8
2246 Female, age 85, both hemispheres 17.2
2528 Male, age 74, both hemispheres 15.1
2531 Female, age 67, both hemispheres 13.7
Entorhinal gyrus
nTPM: 19.9
2117 Female, age 91, right hemisphere 22.6
2764 Male, age 80, right hemisphere 22.1
2613 Female, age 94, left hemisphere 21.7
1787 Male, age 76, left hemisphere 18.6
2686 Male, age 75, right hemisphere 17.4
1938 Female, age 85, left hemisphere 17.1
Hippocampus, CA1
nTPM: 20.7
2749 Male, age 80, left hemisphere 32.2
1873 Female, age 85, both hemispheres 20.2
2045 Male, age 76, both hemispheres 17.6
2527 Male, age 74, both hemispheres 17.3
2082 Female, age 91, right hemisphere 16.5
Hippocampus, CA2
nTPM: 20.7
1892 Male, age 76, both hemispheres 25.1
1963 Male, age 80, left hemisphere 24.2
1940 Female, age 85, left hemisphere 20.1
2113 Female, age 91, right hemisphere 18.4
2437 Female, age 94, left hemisphere 18.4
2249 Male, age 74, both hemispheres 18.1
Hippocampus, CA3
nTPM: 20.0
2137 Male, age 80, left hemisphere 24.4
1867 Male, age 76, both hemispheres 20.6
1891 Female, age 85, both hemispheres 20.3
2436 Male, age 74, both hemispheres 19.0
2861 Female, age 67, both hemispheres 18.7
2620 Female, age 94, left hemisphere 17.2
Parahippocampal cortex
nTPM: 18.5
2532 Female, age 72, left hemisphere 22.0
1850 Male, age 80, both hemispheres 21.9
2018 Male, age 76, both hemispheres 21.6
1933 Female, age 85, both hemispheres 21.2
2245 Female, age 91, both hemispheres 21.0
2622 Female, age 67, right hemisphere 17.2
1990 Female, age 91, right hemisphere 15.8
2692 Male, age 74, both hemispheres 15.8
2250 Female, age 67, right hemisphere 15.6
2693 Female, age 94, both hemispheres 12.3
Perirhinal gyrus
nTPM: 19.8
1841 Female, age 85, right hemisphere 22.5
1847 Female, age 91, left hemisphere 21.4
1794 Male, age 80, right hemisphere 21.3
2848 Male, age 76, right hemisphere 17.5
2521 Female, age 94, right hemisphere 16.1
Subiculum
nTPM: 20.1
2438 Female, age 94, left hemisphere 25.2
1901 Male, age 80, both hemispheres 22.6
2042 Male, age 76, both hemispheres 22.6
1977 Female, age 85, both hemispheres 19.5
2619 Male, age 74, both hemispheres 16.5
2729 Female, age 91, right hemisphere 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 53.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.7
Samples: 197

Max nTPM: 111.7
Min nTPM: 23.7
Std nTPM: 13.9
Median nTPM: 52.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 111.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 100.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 94.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 87.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 87.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 86.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 83.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 83.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 81.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 77.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 77.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10153-102I9 76 years, female 36.6
FF:10169-103B7 60 years, female 33.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 66.9
Pig sample Sample description nTPM
Subiculum
nTPM: 52.1
Samples: 4

Max nTPM: 68.5
Min nTPM: 44.3
Sample A Female 68.5
Sample B Female 44.3
Sample C Male 45.2
Sample D Male 50.5
Dorsal hippocampus
nTPM: 66.9
Samples: 4

Max nTPM: 95.6
Min nTPM: 46.7
Sample A Female 95.6
Sample B Female 58.9
Sample C Male 66.5
Sample D Male 46.7
Entorhinal cortex
nTPM: 57.9
Samples: 4

Max nTPM: 64.1
Min nTPM: 46.5
Sample A Female 64.1
Sample B Female 62.4
Sample C Male 58.5
Sample D Male 46.5
Ventral hippocampus
nTPM: 56.8
Samples: 4

Max nTPM: 62.8
Min nTPM: 41.0
Sample A Female 61.6
Sample B Female 41.0
Sample C Male 61.9
Sample D Male 62.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 177.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 177.8
Samples: 4

Max nTPM: 190.2
Min nTPM: 167.3
Sample A Male 173.2
Sample B Male 190.2
Sample C Female 180.6
Sample D Female 167.3
Hippocampal formation
nTPM: 169.6
Samples: 4

Max nTPM: 203.7
Min nTPM: 139.5
Sample A Male 203.7
Sample B Male 139.5
Sample C Female 162.1
Sample D Female 173.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
678683 Antisense, RP_040914_02_D02, Mouse strain C57BL/6J (56 days, male) 1.9

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