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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MBD1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
54.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
49.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
47.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
40.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
40.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
36.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
36.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
34.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
33.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
31.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
29.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
28.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
27.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
27.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
27.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
26.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
24.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
24.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
23.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
23.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
23.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
20.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
19.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
18.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MBD1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
52.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
52.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
48.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
46.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
44.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
42.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
42.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
42.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
40.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
39.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
37.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
37.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
35.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
35.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
35.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
34.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
34.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
32.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
32.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
31.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
31.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
30.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
30.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
30.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
30.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
29.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
29.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
29.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
29.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
28.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
28.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
27.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
27.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
27.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
27.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
27.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
27.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
26.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
26.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
26.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
26.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
25.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
25.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
24.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
24.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
24.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
24.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
24.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
24.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
23.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
23.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
23.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
23.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
23.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
23.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
23.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
22.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
22.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
22.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
22.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
22.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
22.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
21.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
21.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
21.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
21.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
21.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
21.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
21.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
20.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
20.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
20.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
20.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
19.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
19.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
17.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
17.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
17.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
16.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
15.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MBD1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
44.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
41.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
38.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
36.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
35.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
34.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
33.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
32.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
32.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
32.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
32.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
32.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
32.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
31.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
31.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
31.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
30.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
30.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
29.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
29.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
25.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
22.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MBD1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
66.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
64.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
61.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
58.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
54.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
51.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
45.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
45.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
44.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
43.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
43.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
42.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
42.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
42.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
42.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
40.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
40.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
39.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
37.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
37.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
37.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
36.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
35.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
35.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
34.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
34.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
33.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
32.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
31.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
31.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
31.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
30.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
30.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
30.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
29.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
28.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
28.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
27.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
27.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
27.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
26.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
25.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
25.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
24.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
24.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
24.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
23.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
23.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
23.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
23.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
22.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
22.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
22.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
22.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
22.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
21.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
21.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
21.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
21.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
21.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
21.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
19.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
18.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
18.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
18.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
18.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
17.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
15.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
15.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
15.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
14.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
12.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
0.9
CPT0012080003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0071150004
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0086870003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0081600003
Tumor
0.6
CPT0012370003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0075720003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0009060003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0017850003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0000640003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0002350011
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0012640003
Normal
0.2
CPT0012920003
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0079300001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0015910003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0078840001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0092790003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0078670001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0088640003
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0089480003
Normal
-0.2
CPT0078930003
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0078800003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0000790001
Normal
-0.4
CPT0065930003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0065750003
Tumor
-0.5
CPT0012550003
Tumor
-0.6
CPT0081880003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
