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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
57.2
nTPM
GTEx:
57.2
nTPM
FANTOM5:
35.1
Scaled Tags Per Million
Pig:
68.3
nTPM
Mouse:
117.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
57.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 57.2
Samples: 105
Max nTPM: 88.2
Min nTPM: 30.3
Std nTPM: 11.4
Median nTPM:
316_1
62 years, male
88.2
163_1
78 years, male
84.5
377_1
82 years, female
79.7
321_1
62 years, female
79.4
172_1
72 years, female
79.3
322_1
76 years, male
78.0
177_1
74 years, male
75.9
376_1
75 years, female
74.4
352_1
62 years, male
74.2
386_1
76 years, male
74.2
229_1
69 years, female
74.0
335_1
73 years, female
72.9
379_1
60 years, male
71.8
425_1
59 years, female
71.1
350_1
84 years, female
70.5
243_1
75 years, male
70.3
506_1
65 years, male
70.3
286_1
68 years, female
67.8
406_1
79 years, male
67.5
348_1
84 years, male
66.9
318_1
68 years, male
66.7
349_1
83 years, male
66.5
292_1
71 years, male
65.8
375_1
74 years, female
65.4
405_1
91 years, male
64.7
319_1
81 years, male
64.3
320_1
89 years, female
64.1
396_1
62 years, male
62.7
251_1
78 years, male
62.6
218_1
71 years, female
62.3
293_1
68 years, female
62.0
480_1
63 years, male
61.8
353_1
82 years, female
61.5
452_1
88 years, female
61.5
173_1
67 years, male
61.4
468_1
89 years, male
60.8
264_1
73 years, female
60.4
355_1
70 years, female
60.4
354_1
81 years, female
60.3
404_1
82 years, female
59.9
447_1
81 years, male
59.5
351_1
91 years, male
59.4
295_1
61 years, female
59.3
324_1
76 years, male
59.1
356_1
87 years, female
58.7
266_1
85 years, male
58.4
384_1
83 years, male
58.4
503_1
68 years, male
58.3
394_1
75 years, female
57.8
189_1
76 years, male
57.6
6_1
73 years, female
57.5
518_1
75 years, female
57.4
291_1
76 years, male
56.9
389_1
86 years, female
56.9
526_1
61 years, male
56.7
246_1
77 years, male
56.3
237_1
82 years, male
56.2
517_1
88 years, male
56.2
217_1
76 years, male
55.5
288_1
66 years, female
54.6
254_1
77 years, female
54.5
145_1
84 years, male
53.5
317_1
60 years, male
53.5
314_1
67 years, male
53.2
139_1
64 years, female
53.0
347_1
72 years, male
52.3
499_1
55 years, female
52.1
4_1
88 years, female
51.9
415_1
77 years, female
51.9
501_1
88 years, male
51.8
313_1
79 years, female
51.4
153_1
70 years, female
51.2
2_1
77 years, female
50.7
35_1
74 years, female
50.7
120_1
70 years, female
50.6
17_1
71 years, male
50.5
115_1
83 years, male
50.2
265_1
87 years, male
50.1
466_1
57 years, female
50.1
311_1
78 years, male
50.0
18_1
88 years, male
49.8
413_1
59 years, female
49.6
142_1
61 years, female
49.4
9_1
66 years, female
49.3
43_1
64 years, female
48.2
307_1
66 years, female
47.0
117_1
61 years, male
46.8
81_1
67 years, male
46.1
315_1
62 years, female
45.5
32_1
67 years, male
45.2
414_1
84 years, female
45.0
109_1
81 years, female
44.8
41_1
94 years, female
44.7
126_1
63 years, male
43.8
99_1
64 years, male
43.5
495_1
57 years, female
42.6
137_1
83 years, male
41.8
119_1
70 years, female
40.1
162_1
79 years, female
40.1
149_1
88 years, male
38.5
42_1
85 years, male
38.1
491_1
89 years, female
37.0
89_1
63 years, male
35.8
490_1
67 years, female
32.0
308_1
70 years, female
30.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
