HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:60.3 nTPM
HPA Brain:127.3 nTPM
GTEx:60.3 nTPM
FANTOM5:74.1 Scaled Tags Per Million
Pig:84.1 nTPM
Mouse:152.4 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021854Antibody HPA021991Antibody HPA023922
Glial cells LowNot detectedNot detected
Neuronal cells LowMediumLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 127.3
Sample id Sample description nTPM
Hippocampus
nTPM: 123.9
2148 Female, age 91, left hemisphere 158.5
2621 Female, age 67, right hemisphere 153.8
1898 Male, age 80, left hemisphere 134.0
1855 Male, age 76, left hemisphere 122.6
2529 Female, age 94, left hemisphere 88.3
1911 Female, age 85, right hemisphere 86.5
Dentate gyrus
nTPM: 127.3
1927 Female, age 91, both hemispheres 161.7
2530 Female, age 94, left hemisphere 146.9
2531 Female, age 67, both hemispheres 123.9
2010 Male, age 76, both hemispheres 119.7
2528 Male, age 74, both hemispheres 109.8
2246 Female, age 85, both hemispheres 101.9
Entorhinal gyrus
nTPM: 76.1
2613 Female, age 94, left hemisphere 93.7
2686 Male, age 75, right hemisphere 84.8
2764 Male, age 80, right hemisphere 80.7
1787 Male, age 76, left hemisphere 69.4
1938 Female, age 85, left hemisphere 65.1
2117 Female, age 91, right hemisphere 62.8
Hippocampus, CA1
nTPM: 120.9
2749 Male, age 80, left hemisphere 182.4
1873 Female, age 85, both hemispheres 145.9
2527 Male, age 74, both hemispheres 117.0
2045 Male, age 76, both hemispheres 92.0
2082 Female, age 91, right hemisphere 67.4
Hippocampus, CA2
nTPM: 114.1
1963 Male, age 80, left hemisphere 217.9
1892 Male, age 76, both hemispheres 127.9
2437 Female, age 94, left hemisphere 109.5
2249 Male, age 74, both hemispheres 85.6
2113 Female, age 91, right hemisphere 77.2
1940 Female, age 85, left hemisphere 66.1
Hippocampus, CA3
nTPM: 113.3
2861 Female, age 67, both hemispheres 161.4
2620 Female, age 94, left hemisphere 142.5
2137 Male, age 80, left hemisphere 121.0
1891 Female, age 85, both hemispheres 86.9
2436 Male, age 74, both hemispheres 86.4
1867 Male, age 76, both hemispheres 81.9
Parahippocampal cortex
nTPM: 85.2
2245 Female, age 91, both hemispheres 99.1
2622 Female, age 67, right hemisphere 96.2
2250 Female, age 67, right hemisphere 94.2
2693 Female, age 94, both hemispheres 90.0
2692 Male, age 74, both hemispheres 86.5
2532 Female, age 72, left hemisphere 84.1
1990 Female, age 91, right hemisphere 82.3
1850 Male, age 80, both hemispheres 79.1
1933 Female, age 85, both hemispheres 72.9
2018 Male, age 76, both hemispheres 67.8
Perirhinal gyrus
nTPM: 81.2
1847 Female, age 91, left hemisphere 88.8
2521 Female, age 94, right hemisphere 88.2
1794 Male, age 80, right hemisphere 82.3
1841 Female, age 85, right hemisphere 82.0
2848 Male, age 76, right hemisphere 64.8
Subiculum
nTPM: 81.8
2438 Female, age 94, left hemisphere 93.0
2729 Female, age 91, right hemisphere 91.2
2619 Male, age 74, both hemispheres 84.6
1901 Male, age 80, both hemispheres 81.3
2042 Male, age 76, both hemispheres 71.0
1977 Female, age 85, both hemispheres 69.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 60.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.3
Samples: 197

Max nTPM: 144.5
Min nTPM: 15.2
Std nTPM: 26.1
Median nTPM: 56.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 144.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 140.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 127.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 120.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 119.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 113.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 113.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 111.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 109.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 108.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 105.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.1
FF:10169-103B7 60 years, female 96.5
FF:10153-102I9 76 years, female 51.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 84.1
Pig sample Sample description nTPM
Subiculum
nTPM: 52.8
Samples: 4

Max nTPM: 68.6
Min nTPM: 45.1
Sample A Female 68.6
Sample B Female 48.1
Sample C Male 49.3
Sample D Male 45.1
Dorsal hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 53.7
Min nTPM: 32.4
Sample A Female 52.3
Sample B Female 53.7
Sample C Male 51.9
Sample D Male 32.4
Entorhinal cortex
nTPM: 84.1
Samples: 4

Max nTPM: 93.5
Min nTPM: 74.6
Sample A Female 79.1
Sample B Female 93.5
Sample C Male 89.1
Sample D Male 74.6
Ventral hippocampus
nTPM: 52.1
Samples: 4

Max nTPM: 72.0
Min nTPM: 38.3
Sample A Female 54.1
Sample B Female 38.3
Sample C Male 72.0
Sample D Male 44.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 152.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 152.4
Samples: 4

Max nTPM: 173.6
Min nTPM: 142.0
Sample A Male 148.3
Sample B Male 142.0
Sample C Female 145.5
Sample D Female 173.6
Hippocampal formation
nTPM: 142.1
Samples: 4

Max nTPM: 156.0
Min nTPM: 132.1
Sample A Male 137.4
Sample B Male 142.9
Sample C Female 156.0
Sample D Female 132.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
74562224 Antisense, RP_060208_02_E01, Mouse strain C57BL/6J (56 days, male) 10.4

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