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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
77.9
nTPM
HPA Brain:
65.4
nTPM
GTEx:
77.9
nTPM
FANTOM5:
80.6
Scaled Tags Per Million
Pig:
13.3
nTPM
Mouse:
41.4
nTPM
Allen mouse:
1.5
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
65.4
Sample id
Sample description
nTPM
Amygdala nTPM: 45.0
2517
Female, age 94, left hemisphere
56.2
1987
Female, age 91, left hemisphere
47.7
2695
Female, age 67, right hemisphere
45.2
2814
Male, age 76, right hemisphere
40.9
2514
Male, age 75, right hemisphere
35.1
Basal amygdala nTPM: 65.3
2827
Female, age 67, right hemisphere
77.4
2110
Male, age 80, left hemisphere
74.2
2685
Female, age 94, left hemisphere
69.6
2243
Female, age 91, right hemisphere
68.5
1955
Male, age 76, both hemispheres
52.6
2609
Male, age 75, right hemisphere
49.4
Central amygdala nTPM: 57.4
2826
Female, age 94, left hemisphere
87.5
2239
Male, age 80, left hemisphere
65.2
2515
Male, age 75, right hemisphere
53.5
2701
Female, age 91, right hemisphere
43.0
1905
Male, age 76, both hemispheres
37.9
Corticomedial amygdala nTPM: 54.6
2829
Male, age 80, left hemisphere
79.1
2429
Female, age 94, left hemisphere
56.9
2535
Female, age 67, right hemisphere
54.8
2242
Female, age 91, right hemisphere
51.9
2428
Male, age 75, right hemisphere
48.9
2240
Male, age 76, both hemispheres
36.0
Lateral amygdala nTPM: 65.4
2830
Female, age 67, right hemisphere
81.9
2534
Female, age 94, left hemisphere
80.7
2256
Male, age 80, left hemisphere
68.5
2255
Female, age 91, right hemisphere
59.8
2516
Male, age 75, right hemisphere
55.0
1883
Male, age 76, both hemispheres
46.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 77.9
Samples: 152
Max nTPM: 204.6
Min nTPM: 8.4
Std nTPM: 24.5
Median nTPM: 75.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
204.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
139.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
132.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
129.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
128.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
128.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
125.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
125.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
116.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
115.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
115.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
113.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
113.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
109.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
108.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
108.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
107.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
107.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
104.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
103.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
103.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
100.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
99.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
99.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
97.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
95.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
95.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
94.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
94.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
93.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
93.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
92.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
92.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
92.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
91.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
91.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
90.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
90.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
89.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
89.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
89.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
89.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
88.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
88.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
88.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
87.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
87.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
87.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
87.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
86.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
86.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
85.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
84.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
84.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
84.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
83.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
83.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
83.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
83.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
83.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
82.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
82.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
81.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
81.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
81.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
81.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
80.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
78.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
78.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
77.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
77.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
76.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
76.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
75.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
75.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
75.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
75.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
75.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
74.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
74.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
73.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
73.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
73.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
73.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
73.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
72.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
72.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
72.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
71.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
71.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
71.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
70.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
70.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
69.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
68.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
68.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
67.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
66.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
66.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
66.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
65.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
65.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
65.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
64.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
64.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
63.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
63.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
63.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
62.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
62.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
62.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
62.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
61.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
61.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
61.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
61.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
61.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
61.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
60.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
60.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
60.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
58.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
58.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
57.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
57.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
56.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
55.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
55.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
54.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
53.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
53.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
52.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
52.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
52.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
52.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
52.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
50.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
48.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
47.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
47.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
47.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
45.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
44.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
44.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
43.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
41.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
40.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
37.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
36.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
27.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
8.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 41.4
Samples: 4
Max nTPM: 45.9
Min nTPM: 34.2
Sample A
Male
45.9
Sample B
Male
43.1
Sample C
Female
34.2
Sample D
Female
42.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.