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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAS3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
46.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
24.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
19.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
13.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
9.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAS3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
44.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
39.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
37.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
33.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
27.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
26.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
24.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
24.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
22.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
22.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
22.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
20.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
20.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
20.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
17.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
17.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
16.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
11.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
10.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
10.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
7.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
7.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
5.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAS3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
27.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
26.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
18.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
10.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
10.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
9.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
9.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
9.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
9.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
9.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
9.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
8.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
7.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
7.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
6.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
5.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
5.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAS3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
124.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
62.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
56.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
54.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
47.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
44.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
44.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
43.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
41.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
40.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
36.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
35.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
34.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
32.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
31.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
31.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
31.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
31.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
30.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
29.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
29.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
29.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
29.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
28.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
28.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
27.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
27.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
27.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
27.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
27.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
27.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
26.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
26.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
26.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
25.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
25.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
22.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
22.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
22.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
21.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
21.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
21.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
21.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
21.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
21.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
20.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
20.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
19.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
19.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
18.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
15.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
13.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
12.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
12.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
10.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
9.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
8.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0079430001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0012370003
Tumor
0.3
CPT0023360001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0001350001
Normal
0.3
CPT0011240003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0002270011
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0006730001
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0075570001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0020020001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0086890003
Normal
0.2
CPT0079000001
Normal
0.2
CPT0012900004
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0088500001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0081880003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0088690003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0065430003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0084560003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0078830003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0010120001
Normal
-0.5
CPT0010110003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
