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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSH2 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
29.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
23.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
11.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
10.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
8.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
8.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
2.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSH2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
27.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
25.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
25.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
24.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
20.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
20.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
20.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
19.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
19.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
18.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
18.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
18.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
16.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
16.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
16.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
15.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
15.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
13.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
11.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
11.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
10.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
9.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
9.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
9.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
8.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
8.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
7.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
7.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
7.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
6.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSH2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
19.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
18.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
17.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
17.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
17.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
13.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
12.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
12.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
10.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSH2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
84.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
69.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
56.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
54.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
53.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
52.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
52.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
51.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
51.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
50.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
50.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
50.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
46.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
46.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
45.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
45.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
45.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
44.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
44.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
44.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
43.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
41.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
41.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
39.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
39.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
38.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
38.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
38.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
37.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
37.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
36.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
36.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
36.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
36.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
36.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
35.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
35.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
35.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
35.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
34.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
34.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
34.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
34.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
34.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
33.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
33.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
33.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
32.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
31.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
31.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
31.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
31.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
31.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
30.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
29.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
28.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
28.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
28.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
27.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
27.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
26.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
26.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
26.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
26.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
26.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
25.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
25.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
25.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
25.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
24.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
24.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
24.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
23.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
22.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
22.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
22.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
22.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
21.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
21.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
20.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
19.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
19.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
19.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
18.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
18.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
17.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
15.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
15.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
14.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
13.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
12.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065930003
Tumor
1.2
CPT0023690003
Tumor
1.1
CPT0025110003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0006630003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0075560003
Tumor
0.7
CPT0006900003
Tumor
0.6
CPT0078930003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0063630003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0015730003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0007320003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0002350011
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0089460004
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0065870003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0075570001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0088630003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0092800003
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0025230003
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0064400001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0017450001
Normal
-0.5
CPT0012180003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0017850003
Tumor
-0.5
CPT0010170001
Normal
-0.5
CPT0078940001
Normal
-0.6
CPT0000660001
Normal
-0.8
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025050003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0079270003
Tumor
N/A
CPT0001270001
Normal
N/A
CPT0024680001
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0001260009
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0077110003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0014450004
Tumor
N/A
CPT0076350001
Normal
N/A
CPT0012370003
Tumor
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0079300001
Normal
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
