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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KSR1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
6.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
3.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
3.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
2.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KSR1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
249.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
185.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
172.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
170.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
161.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
158.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
156.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
156.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
152.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
151.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
149.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
149.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
149.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
131.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
131.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
130.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
129.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
129.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
128.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
126.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
126.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
125.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
122.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
122.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
118.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
117.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
113.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
112.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
112.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
111.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
109.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
109.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
108.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
107.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
106.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
105.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
105.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
105.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
104.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
103.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
102.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
100.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
100.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
100.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
98.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
96.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
95.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
95.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
95.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
95.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
95.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
94.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
94.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
94.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
94.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
93.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
92.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
92.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
91.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
91.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
91.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
91.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
90.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
90.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
90.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
89.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
89.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
88.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
87.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
87.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
86.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
85.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
85.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
85.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
84.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
84.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
83.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
83.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
83.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
83.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
83.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
83.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
82.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
81.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
81.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
81.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
80.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
80.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
80.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
79.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
79.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
79.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
79.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
78.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
78.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
78.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
77.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
77.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
77.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
76.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
76.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
75.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
75.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
74.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
74.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
72.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
72.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
72.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
71.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
71.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
69.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
69.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
69.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
69.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
69.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
69.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
69.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
69.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
68.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
67.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
67.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
67.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
67.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
66.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
66.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
66.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
66.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
66.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
66.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
65.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
65.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
65.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
65.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
65.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
64.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
64.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
64.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
64.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
64.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
63.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
63.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
63.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
62.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
62.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
62.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
62.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
62.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
62.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
61.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
61.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
60.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
59.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
59.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
59.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
59.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
59.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
59.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
59.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
58.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
58.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
58.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
58.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
57.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
57.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
56.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
56.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
56.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
56.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
56.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
55.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
55.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
55.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
55.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
55.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
55.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
54.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
54.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
54.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
53.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
53.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
53.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
53.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
53.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
53.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
53.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
52.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
52.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
52.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
52.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
52.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
52.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
52.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
51.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
51.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
51.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
51.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
51.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
50.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
50.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
50.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
50.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
49.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
49.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
49.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
48.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
48.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
47.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
47.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
47.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
47.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
46.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
46.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
46.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
45.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
45.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
45.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
45.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
45.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
45.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
45.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
44.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
44.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
44.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
44.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
44.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
44.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
44.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
44.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
43.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
43.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
43.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
42.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
42.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
42.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
42.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
42.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
41.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
41.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
40.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
40.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
40.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
40.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
40.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
39.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
39.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
39.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
39.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
38.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
38.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
38.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
38.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
37.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
37.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
37.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
37.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
36.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
36.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
36.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
36.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
35.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
35.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
35.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
35.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
35.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
35.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
35.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
35.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
34.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
34.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
34.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
33.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
33.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
32.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
32.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
31.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
31.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
31.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
30.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
30.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
29.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
29.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
29.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
29.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
29.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
28.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
28.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
28.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
28.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
27.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
27.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
27.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
27.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
27.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
26.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
26.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
26.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
26.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
26.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
25.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
24.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
24.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
24.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
24.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
23.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
23.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
23.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
21.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
19.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
10.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
5.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
4.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KSR1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
168.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
168.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
163.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
159.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
142.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
132.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
131.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
124.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
121.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
117.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
117.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
116.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
115.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
111.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
108.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
107.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
102.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
96.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
95.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
93.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
92.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
85.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
80.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
80.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
79.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
78.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
78.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
75.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
74.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
74.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
71.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
71.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
71.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
68.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
68.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
66.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
66.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
63.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
61.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
61.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
60.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
60.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
59.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
58.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
58.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
56.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
55.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
55.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
55.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
53.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
52.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
51.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
50.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
50.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
49.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
48.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
48.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
47.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
47.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
45.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
44.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
43.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
42.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
35.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
34.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
23.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
21.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KSR1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
164.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
78.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
70.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
38.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
36.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
32.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
27.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
27.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
19.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
19.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
17.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
17.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
14.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
14.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
14.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
13.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
13.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
12.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
12.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
11.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
11.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
10.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
10.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
10.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
9.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
9.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
9.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
9.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
8.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
7.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
7.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
7.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
7.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
7.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
6.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
6.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
6.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
6.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
6.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
6.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
5.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
5.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
5.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
5.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
5.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
5.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
3.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
3.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
2.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
2.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012550003
Tumor
1.4
CPT0088970003
Tumor
1.2
CPT0088760003
Tumor
0.9
CPT0000870016
Tumor
0.6
CPT0086950003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0011410003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0025230003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0079410003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0066470004
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0079230003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0001350001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0079510001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0009000003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0006530001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0007870001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0012770003
Normal
-0.2
CPT0065690003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0012180003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0000660001
Normal
-0.3
CPT0025290003
Tumor
-0.3
CPT0078940001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0086030003
Tumor
-0.3
CPT0088780001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0025110003
Tumor
-0.4
CPT0076330003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0001340003
Tumor
-0.7
CPT0078660003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
