HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.8 nTPM
HPA Brain:49.0 nTPM
GTEx:11.8 nTPM
FANTOM5:52.0 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:35.4 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056109
Glial cells Not detected
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 49.0
Sample id Sample description nTPM
Hippocampus
nTPM: 40.9
2148 Female, age 91, left hemisphere 49.4
1898 Male, age 80, left hemisphere 42.7
2621 Female, age 67, right hemisphere 40.1
1855 Male, age 76, left hemisphere 39.9
2529 Female, age 94, left hemisphere 37.4
1911 Female, age 85, right hemisphere 36.0
Dentate gyrus
nTPM: 44.8
2531 Female, age 67, both hemispheres 55.4
1927 Female, age 91, both hemispheres 50.5
2010 Male, age 76, both hemispheres 44.1
2528 Male, age 74, both hemispheres 44.1
2246 Female, age 85, both hemispheres 40.8
2530 Female, age 94, left hemisphere 33.7
Entorhinal gyrus
nTPM: 42.7
1938 Female, age 85, left hemisphere 49.5
2764 Male, age 80, right hemisphere 44.1
2613 Female, age 94, left hemisphere 43.3
1787 Male, age 76, left hemisphere 40.6
2686 Male, age 75, right hemisphere 39.9
2117 Female, age 91, right hemisphere 39.0
Hippocampus, CA1
nTPM: 45.8
2045 Male, age 76, both hemispheres 52.0
2749 Male, age 80, left hemisphere 51.0
1873 Female, age 85, both hemispheres 45.6
2082 Female, age 91, right hemisphere 43.6
2527 Male, age 74, both hemispheres 36.8
Hippocampus, CA2
nTPM: 40.8
1963 Male, age 80, left hemisphere 48.6
1892 Male, age 76, both hemispheres 48.2
1940 Female, age 85, left hemisphere 38.9
2437 Female, age 94, left hemisphere 37.7
2113 Female, age 91, right hemisphere 36.4
2249 Male, age 74, both hemispheres 35.2
Hippocampus, CA3
nTPM: 48.4
2620 Female, age 94, left hemisphere 55.3
2861 Female, age 67, both hemispheres 50.8
2137 Male, age 80, left hemisphere 49.6
1867 Male, age 76, both hemispheres 48.3
2436 Male, age 74, both hemispheres 45.9
1891 Female, age 85, both hemispheres 40.2
Parahippocampal cortex
nTPM: 42.3
2693 Female, age 94, both hemispheres 53.4
1850 Male, age 80, both hemispheres 48.7
2018 Male, age 76, both hemispheres 43.4
2245 Female, age 91, both hemispheres 42.6
1933 Female, age 85, both hemispheres 42.5
2532 Female, age 72, left hemisphere 40.7
2250 Female, age 67, right hemisphere 39.4
2622 Female, age 67, right hemisphere 38.7
1990 Female, age 91, right hemisphere 38.3
2692 Male, age 74, both hemispheres 35.5
Perirhinal gyrus
nTPM: 49.0
1841 Female, age 85, right hemisphere 51.8
1794 Male, age 80, right hemisphere 51.6
1847 Female, age 91, left hemisphere 48.3
2521 Female, age 94, right hemisphere 47.9
2848 Male, age 76, right hemisphere 45.6
Subiculum
nTPM: 40.9
2729 Female, age 91, right hemisphere 47.3
2438 Female, age 94, left hemisphere 45.8
1977 Female, age 85, both hemispheres 44.3
1901 Male, age 80, both hemispheres 37.6
2042 Male, age 76, both hemispheres 35.9
2619 Male, age 74, both hemispheres 34.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 23.6
Min nTPM: 2.9
Std nTPM: 3.8
Median nTPM: 11.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 23.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 23.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 22.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 22.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 21.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 20.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 18.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 18.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 18.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 52.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.0
FF:10169-103B7 60 years, female 54.0
FF:10153-102I9 76 years, female 50.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 29.4
Pig sample Sample description nTPM
Subiculum
nTPM: 27.6
Samples: 4

Max nTPM: 33.7
Min nTPM: 21.8
Sample A Female 33.7
Sample B Female 27.6
Sample C Male 27.2
Sample D Male 21.8
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 33.2
Min nTPM: 22.7
Sample A Female 32.2
Sample B Female 33.2
Sample C Male 26.5
Sample D Male 22.7
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 29.1
Min nTPM: 22.6
Sample A Female 28.5
Sample B Female 27.6
Sample C Male 29.1
Sample D Male 22.6
Ventral hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 36.1
Min nTPM: 24.3
Sample A Female 26.1
Sample B Female 24.3
Sample C Male 36.1
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 35.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 34.6
Min nTPM: 31.1
Sample A Male 33.1
Sample B Male 31.1
Sample C Female 31.9
Sample D Female 34.6
Hippocampal formation
nTPM: 35.4
Samples: 4

Max nTPM: 38.1
Min nTPM: 32.1
Sample A Male 32.1
Sample B Male 35.7
Sample C Female 38.1
Sample D Female 35.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
69015164 Antisense, RP_050310_02_D10, Mouse strain C57BL/6J (56 days, male) 6.4

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