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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP1LC3B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
96.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
250.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
194.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
186.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
171.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
171.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
169.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
168.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
168.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
156.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
155.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
145.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
133.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
121.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
120.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
114.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
111.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
111.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
109.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
107.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
105.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
105.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
104.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
101.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
100.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
100.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
99.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
98.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
98.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
96.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
95.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
95.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
90.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
87.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
87.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
83.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
83.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
82.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
80.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
80.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
79.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
75.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
75.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
74.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
71.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
70.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
67.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
66.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
63.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
62.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
56.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
55.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
55.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
54.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
54.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
53.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
52.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
50.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
49.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
48.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
47.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
43.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
41.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
33.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP1LC3B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
188.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
175.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
144.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
128.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
127.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
121.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
119.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
118.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
117.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
115.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
113.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
113.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
113.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
111.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
109.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
109.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
108.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
106.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
106.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
105.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
105.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
104.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
103.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
103.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
103.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
102.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
101.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
100.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
98.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
96.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
96.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
96.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
96.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
95.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
94.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
94.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
94.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
92.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
91.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
91.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
91.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
90.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
90.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
90.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
90.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
89.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
89.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
88.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
88.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
88.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
88.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
88.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
88.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
88.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
87.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
87.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
86.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
86.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
86.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
86.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
86.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
86.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
85.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
85.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
85.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
84.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
84.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
84.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
83.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
83.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
83.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
83.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
83.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
83.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
82.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
82.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
82.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
82.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
82.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
82.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
82.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
82.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
82.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
82.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
82.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
82.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
82.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
82.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
82.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
82.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
81.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
81.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
81.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
81.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
81.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
81.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
80.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
80.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
80.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
80.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
80.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
79.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
79.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
79.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
79.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
79.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
79.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
78.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
78.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
78.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
78.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
78.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
78.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
78.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
78.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
77.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
77.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
77.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
77.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
77.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
77.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
77.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
77.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
77.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
77.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
76.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
76.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
76.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
76.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
76.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
76.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
76.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
76.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
76.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
76.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
75.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
75.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
75.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
75.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
75.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
75.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
75.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
74.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
74.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
74.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
74.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
74.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
74.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
74.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
74.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
74.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
74.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
74.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
73.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
73.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
73.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
73.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
73.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
73.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
73.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
73.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
73.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
73.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
72.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
72.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
72.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
72.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
72.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
72.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
72.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
72.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
72.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
72.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
71.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
71.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
71.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
71.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
71.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
71.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
71.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
71.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
71.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
71.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
71.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
71.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
70.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
70.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
70.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
70.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
70.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
70.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
70.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
70.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
70.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
70.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
70.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
70.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
70.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
70.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
70.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
69.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
69.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
69.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
69.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
69.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
69.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
69.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
69.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
68.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
68.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
68.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
68.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
68.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
68.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
68.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
68.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
68.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
68.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
68.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
68.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
67.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
67.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
67.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
67.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
67.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
67.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
67.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
67.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
67.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
67.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
67.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
67.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
67.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
67.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
67.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
67.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
67.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
66.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
66.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
66.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
66.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
66.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
66.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
66.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
66.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
66.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
66.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
65.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
65.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
65.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
65.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
65.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
65.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
65.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
65.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
65.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
65.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
65.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
65.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
65.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
64.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
64.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
64.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
64.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
64.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
64.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
64.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
64.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
64.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
64.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
64.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
64.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
64.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
64.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
63.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
63.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
63.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
63.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
63.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
63.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
63.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
62.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
62.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
62.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
62.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
62.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
62.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
62.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
62.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
62.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
62.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
62.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
62.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
62.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
61.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
61.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
61.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
61.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
61.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
61.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
61.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
61.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
61.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
61.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
61.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
60.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
60.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
60.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
60.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
60.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
60.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
60.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
60.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
60.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
59.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
59.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
59.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
59.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
59.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
59.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
59.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
59.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
59.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
59.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
59.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
59.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
58.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
58.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
58.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
58.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
58.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
58.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
58.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
58.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
58.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
58.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
58.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
57.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
57.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
57.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
57.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
57.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
57.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
57.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
57.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
57.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
57.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
57.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
57.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
57.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
56.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
56.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
56.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
56.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
56.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
56.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
56.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
55.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
55.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
55.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
55.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
55.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
55.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
55.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
55.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
55.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
55.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
54.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
54.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
54.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
54.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
54.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
54.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
53.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
53.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
53.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
53.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
53.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
53.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
53.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
53.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
53.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
53.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
53.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
53.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
53.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
53.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
53.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
52.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
52.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
52.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
52.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
52.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
52.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
52.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
52.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
52.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
52.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
52.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
52.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
52.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
52.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
52.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
52.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
51.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
51.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
51.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
51.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
51.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
51.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
51.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
51.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
51.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
50.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
50.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
50.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
50.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
49.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
49.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
49.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
49.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
49.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
48.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
48.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
48.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
48.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
48.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
48.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
47.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
47.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
47.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
47.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
47.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
47.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
47.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
47.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
46.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
46.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
46.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
46.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
46.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
46.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
45.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
45.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
45.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
45.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
45.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
44.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
44.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
43.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
43.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
43.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
42.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
42.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
42.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
41.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
41.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
40.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
40.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
40.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
39.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
39.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
38.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
38.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
38.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
37.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
37.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
37.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
37.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
36.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
36.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
36.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
36.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
35.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
35.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
34.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
33.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
32.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
32.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
32.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
32.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
31.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
31.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
30.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
30.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
30.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
28.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
28.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
28.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
27.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
26.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
26.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
24.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
17.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP1LC3B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
73.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
141.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
138.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
137.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
128.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
117.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
114.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
112.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
111.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
108.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
105.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
104.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
103.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
102.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
99.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
96.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
95.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
94.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
93.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
91.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
91.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
89.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
89.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
88.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
85.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
85.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
85.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
85.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
84.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
84.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
83.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
81.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
79.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
79.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
78.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
77.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
77.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
77.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
75.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
74.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
74.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
73.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
73.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
73.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
72.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
70.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
70.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
69.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
69.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
69.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
68.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
68.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
67.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
67.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
66.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
66.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
66.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
65.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
65.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
64.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
63.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
63.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
63.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
63.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
62.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
62.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
61.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
61.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
60.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
60.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
59.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
58.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
58.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
58.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
57.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
57.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
57.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
57.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
56.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
56.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
56.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
56.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
55.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
55.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
53.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
51.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
50.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
48.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
42.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
42.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
40.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP1LC3B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
104.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
353.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
337.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
336.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
307.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
281.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
266.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
266.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
255.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
244.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
237.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
235.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
226.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
222.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
217.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
212.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
212.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
200.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
200.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
195.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
191.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
186.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
186.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
184.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
180.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
169.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
168.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
167.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
167.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
165.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
164.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
159.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
159.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
157.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
156.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
153.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
151.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
149.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
149.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
149.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
149.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
147.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
146.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
145.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
143.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
142.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
142.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
141.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
140.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
140.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
139.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
138.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
138.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
137.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
137.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
136.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
136.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
135.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
134.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
134.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
132.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
132.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
132.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
131.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
130.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
129.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
129.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
128.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
128.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
127.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
126.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
126.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
125.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
125.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
125.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
124.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
124.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
122.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
121.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
121.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
120.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
119.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
119.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
119.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
119.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
118.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
118.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
118.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
118.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
117.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
117.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
116.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
115.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
115.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
114.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
114.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
114.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
113.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
111.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
111.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
111.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
110.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
110.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
110.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
109.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
109.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
109.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
109.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
109.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
108.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
108.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
108.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
108.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
108.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
107.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
106.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
106.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
106.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
105.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
105.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
104.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
103.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
102.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
102.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
102.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
101.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
101.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
101.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
100.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
100.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
100.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
99.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
99.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
99.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
98.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
98.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
98.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
97.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
97.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
97.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
96.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
96.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
96.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
96.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
96.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
95.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
95.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
95.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
93.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
93.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
93.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
92.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
92.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
91.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
90.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
90.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
90.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
90.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
89.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
89.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
89.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
88.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
88.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
88.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
86.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
86.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
86.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
86.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
86.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
85.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
85.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
84.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
84.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
83.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
83.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
83.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
83.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
82.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
82.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
81.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
80.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
80.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
80.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
79.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
79.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
78.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
78.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
78.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
77.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
77.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
76.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
75.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
75.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
75.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
74.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
74.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
74.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
73.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
73.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
72.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
72.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
72.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
71.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
71.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
71.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
70.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
70.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
69.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
69.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
68.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
68.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
68.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
67.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
67.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
67.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
67.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
66.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
66.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
66.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
66.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
64.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
64.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
64.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
63.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
62.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
61.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
60.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
60.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
60.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
60.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
60.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
60.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
59.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
59.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
58.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
57.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
57.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
56.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
54.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
54.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
54.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
54.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
53.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
53.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
52.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
52.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
52.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
51.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
51.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
51.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
50.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
50.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
49.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
49.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
48.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
47.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
47.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
46.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
46.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
45.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
43.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
42.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
42.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
42.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
41.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
40.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
39.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
39.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
39.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
37.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
37.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
36.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
36.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
35.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
33.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
32.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
32.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
25.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
21.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.