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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DHX38 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
45.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
40.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
39.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
39.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
37.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
35.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
33.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
30.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
30.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
30.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
30.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
28.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
26.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
26.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
26.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
25.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
25.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
24.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
23.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
23.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
23.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
23.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
23.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
23.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
22.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
22.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
22.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
21.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
21.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
21.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
20.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
20.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
20.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
19.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
19.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
19.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
19.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
19.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
19.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
18.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
18.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
18.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
18.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
18.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
18.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
18.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
18.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
18.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
18.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
18.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
18.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
18.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
18.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
17.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
17.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
17.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
17.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
17.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
17.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
17.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
17.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
17.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
17.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
17.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
17.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
16.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
16.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
16.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
16.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
16.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
16.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
16.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
16.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
15.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
15.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
15.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
15.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
15.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
15.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
15.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
15.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
15.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
15.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
15.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
15.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
15.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
15.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
15.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
14.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
14.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
14.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
14.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
14.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
14.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
14.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
13.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
13.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
13.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
13.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
13.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
13.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
13.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
13.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
13.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
13.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
13.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
13.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
13.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
13.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
13.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
13.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
12.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
12.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
12.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
12.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
12.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
12.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
11.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
11.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
11.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
11.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
11.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
11.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
11.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
11.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
11.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
11.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
11.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
11.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
11.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
11.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
10.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
10.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
10.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
10.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
9.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
9.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
8.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
8.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
8.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
8.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
8.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
8.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
7.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
6.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DHX38 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.2
Number of samples
231
Samples
Sample
Description
TPM
DO45185
0 years, male, NA, stage:2, alive, 600 days
34.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
29.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
27.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
27.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
25.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
25.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
25.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
25.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
24.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
24.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
22.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
20.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
20.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
19.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
19.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
19.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
18.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
18.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
18.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
18.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
18.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
17.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
16.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
16.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
16.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
16.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
16.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
16.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
16.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
16.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
15.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
15.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
15.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
14.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
14.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
14.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
14.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
13.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
13.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
13.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
13.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
12.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
12.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
12.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
12.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
11.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
10.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
10.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
10.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
10.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
10.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
10.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
9.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
9.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
9.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
8.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
8.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
8.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
8.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
8.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
8.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
7.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
7.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
6.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
4.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
4.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
661
Tumor
0.8
267
Tumor
0.7
635
Tumor
0.7
951
Tumor
0.7
777
Tumor
0.6
535
Tumor
0.5
977
Tumor
0.5
741
Tumor
0.5
425
Tumor
0.5
724
Normal
0.5
413
Tumor
0.5
391
Tumor
0.5
527
Tumor
0.5
283
Tumor
0.5
445
Tumor
0.4
975
Tumor
0.4
1027
Tumor
0.4
755
Tumor
0.4
383
Tumor
0.4
697
Tumor
0.4
141
Tumor
0.4
913
Tumor
0.4
113
Tumor
0.4
715
Tumor
0.4
433
Tumor
0.3
785
Tumor
0.3
965
Tumor
0.3
1045
Tumor
0.3
387
Tumor
0.3
311
Tumor
0.3
354
Normal
0.3
123
Tumor
0.3
415
Tumor
0.3
367
Tumor
0.3
395
Tumor
0.3
863
Tumor
0.3
672
Normal
0.3
497
Tumor
0.3
814
Normal
0.3
813
Tumor
0.3
636
Normal
0.3
112
Tumor
0.2
955
Tumor
0.2
943
Tumor
0.2
978
Normal
0.2
211
Tumor
0.2
647
Tumor
0.2
818
Normal
0.2
427
Tumor
0.2
192
Normal
0.2
191
Tumor
0.2
721
Tumor
0.2
171
Tumor
0.2
958
Normal
0.2
384
Normal
0.2
957
Tumor
0.2
261
Tumor
0.2
467
Tumor
0.2
451
Tumor
0.2
944
Normal
0.2
464
Normal
0.2
431
Tumor
0.2
455
Tumor
0.2
616
Normal
0.2
456
Normal
0.2
727
Tumor
0.2
967
Tumor
0.2
924
Normal
0.2
436
Normal
0.2
1015
Tumor
0.2
351
Tumor
0.2
983
Tumor
0.2
911
Tumor
0.2
533
Tumor
0.2
882
Normal
0.2
628
Normal
0.2
428
Normal
0.2
452
Normal
0.2
524
Normal
0.2
867
Tumor
0.2
353
Tumor
0.2
564
Normal
0.2
912
Normal
0.2
147
Tumor
0.2
884
Normal
0.2
918
Normal
0.2
671
Tumor
0.2
536
Normal
0.2
744
Normal
0.2
494
Normal
0.2
742
Normal
0.2
217
Tumor
0.2
493
Tumor
0.2
473
Tumor
0.2
1041
Tumor
0.2
1026
Normal
0.2
966
Normal
0.2
642
Normal
0.2
917
Tumor
0.2
824
Normal
0.2
341
Tumor
0.2
187
Tumor
0.2
468
Normal
0.2
618
Normal
0.1
938
Normal
0.1
212
Normal
0.1
572
Normal
0.1
627
Tumor
0.1
662
Normal
0.1
666
Normal
0.1
568
Normal
0.1
664
Normal
0.1
484
Normal
0.1
963
Tumor
0.1
696
Normal
0.1
857
Tumor
0.1
862
Normal
0.1
355
Tumor
0.1
426
Normal
0.1
376
Normal
0.1
937
Tumor
0.1
498
Normal
0.1
878
Normal
0.1
444
Normal
0.1
954
Normal
0.1
713
Tumor
0.1
411
Tumor
0.1
1031
Tumor
0.1
926
Normal
0.1
558
Normal
0.1
352
Normal
0.1
488
Normal
0.1
368
Normal
0.1
665
Tumor
0.1
135
Tumor
0.1
881
Tumor
0.1
196
Normal
0.1
534
Normal
0.1
984
Normal
0.1
481
Tumor
0.1
146
Normal
0.1
922
Normal
0.1
447
Tumor
0.1
714
Normal
0.1
492
Normal
0.1
185
Tumor
0.1
1014
Normal
0.1
361
Tumor
0.1
148
Normal
0.1
817
Tumor
0.1
386
Normal
0.1
424
Normal
0.1
344
Normal
0.1
866
Normal
0.1
874
Normal
0.1
396
Normal
0.1
342
Normal
0.1
1021
Tumor
0.1
1042
Normal
0.1
617
Tumor
0.1
964
Normal
0.1
145
Tumor
0.1
1046
Normal
0.1
331
Tumor
0.1
743
Tumor
0.1
574
Normal
0.1
434
Normal
0.1
462
Normal
0.1
224
Normal
0.1
858
Normal
0.1
1044
Normal
0.1
737
Tumor
0.1
298
Normal
0.1
362
Normal
0.1
571
Tumor
0.1
114
Normal
0.1
443
Tumor
0.1
161
Tumor
0.1
357
Tumor
0.1
1032
Normal
0.1
327
Tumor
0.1
716
Normal
0.1
258
Normal
0.1
478
Normal
0.1
698
Normal
0.1
272
Normal
0.1
463
Tumor
0.1
563
Tumor
0.1
916
Normal
0.1
868
Normal
0.1
131
Tumor
0.1
277
Tumor
0.1
861
Tumor
0.1
968
Normal
0.1
1028
Normal
0.1
786
Normal
0.1
686
Normal
0.1
546
Normal
0.1
461
Tumor
0.1
385
Tumor
0.1
883
Tumor
0.1
222
Normal
0.1
516
Normal
0.1
648
Normal
0.0
132
Normal
0.0
364
Normal
0.0
823
Tumor
0.0
412
Normal
0.0
138
Normal
0.0
864
Normal
0.0
416
Normal
0.0
448
Normal
0.0
297
Tumor
0.0
466
Normal
0.0
232
Normal
0.0
952
Normal
0.0
221
Tumor
0.0
313
Tumor
0.0
517
Tumor
0.0
685
Tumor
0.0
472
Normal
0.0
1016
Normal
0.0
262
Normal
0.0
422
Normal
0.0
526
Normal
0.0
432
Normal
0.0
388
Normal
0.0
128
Normal
0.0
268
Normal
0.0
956
Normal
0.0
756
Normal
0.0
414
Normal
0.0
271
Tumor
0.0
982
Normal
0.0
136
Normal
0.0
976
Normal
0.0
366
Normal
0.0
528
Normal
0.0
423
Tumor
0.0
852
Normal
0.0
446
Normal
0.0
538
Normal
0.0
228
Normal
0.0
816
Normal
0.0
738
Normal
0.0
925
Tumor
0.0
482
Normal
0.0
286
Normal
0.0
392
Normal
0.0
778
Normal
0.0
365
Tumor
0.0
728
Normal
0.0
312
Normal
0.0
746
Normal
0.0
111
Normal
0.0
554
Normal
0.0
1025
Tumor
0.0
358
Normal
0.0
474
Normal
0.0
1022
Normal
0.0
124
Normal
0.0
127
Tumor
0.0
477
Tumor
0.0
514
Normal
0.0
142
Normal
0.0
723
Tumor
0.0
278
Normal
0.0
518
Normal
0.0
188
Normal
0.0
394
Normal
0.0
487
Tumor
0.0
231
Tumor
0.0
435
Tumor
0.0
914
Normal
0.0
284
Normal
0.0
483
Tumor
0.0
343
Tumor
0.0
328
Normal
0.0
921
Tumor
-0.1
218
Normal
-0.1
877
Tumor
-0.1
615
Tumor
-0.1
523
Tumor
-0.1
513
Tumor
-0.1
663
Tumor
-0.1
186
Normal
-0.1
356
Normal
-0.1
421
Tumor
-0.1
214
Normal
-0.1
465
Tumor
-0.1
162
Normal
-0.1
722
Normal
-0.1
126
Normal
-0.1
815
Tumor
-0.1
865
Tumor
-0.1
471
Tumor
-0.1
525
Tumor
-0.1
213
Tumor
-0.1
332
Normal
-0.1
923
Tumor
-0.1
567
Tumor
-0.1
491
Tumor
-0.1
137
Tumor
-0.1
553
Tumor
-0.1
515
Tumor
-0.2
314
Normal
-0.2
172
Normal
-0.2
537
Tumor
-0.2
223
Tumor
-0.2
981
Tumor
-0.2
545
Tumor
-0.2
375
Tumor
-0.2
641
Tumor
-0.2
695
Tumor
-0.2
363
Tumor
-0.2
227
Tumor
-0.2
195
Tumor
-0.2
573
Tumor
-0.2
873
Tumor
-0.2
953
Tumor
-0.2
915
Tumor
-0.2
1013
Tumor
-0.2
285
Tumor
-0.2
125
Tumor
-0.3
393
Tumor
-0.3
557
Tumor
-0.3
1043
Tumor
-0.3
851
Tumor
-0.4
257
Tumor
-0.5
745
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
