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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FTO is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
32.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
24.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
23.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
22.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
21.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
21.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
20.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
20.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
19.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
19.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
19.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
18.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
17.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
17.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
17.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
17.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
16.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
16.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
16.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
15.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
15.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
15.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
14.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
14.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
14.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
14.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
14.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
14.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
14.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
14.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
13.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
13.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
13.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
12.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
12.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
12.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
12.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
11.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
11.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
11.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
10.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
9.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
9.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
9.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
8.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
8.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
7.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
7.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
7.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
6.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
6.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
5.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
5.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
4.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
4.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
3.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FTO is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.2
Number of samples
231
Samples
Sample
Description
TPM
DO45155
0 years, male, NA, stage:2, alive, 2160 days
14.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
14.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
14.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
12.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
10.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
9.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
9.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
8.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
8.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
8.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
7.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
7.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
7.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
6.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
6.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
6.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
6.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
5.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
5.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
5.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
5.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
5.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
5.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
5.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
5.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
5.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
5.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
5.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
5.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
5.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
4.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
4.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
4.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
4.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
4.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
4.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
4.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
4.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
4.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
4.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
4.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
4.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
3.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
3.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
3.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
3.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
3.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
3.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
3.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
3.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
3.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
3.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
3.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
3.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
3.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
3.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
3.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
3.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
3.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
3.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
3.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
2.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
2.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
2.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
2.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
2.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
2.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
2.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
2.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
2.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
1.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
1.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
1.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
1.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
413
Tumor
1.0
777
Tumor
0.8
977
Tumor
0.7
755
Tumor
0.7
724
Normal
0.7
113
Tumor
0.7
715
Tumor
0.7
685
Tumor
0.7
741
Tumor
0.6
123
Tumor
0.6
261
Tumor
0.6
393
Tumor
0.5
527
Tumor
0.5
813
Tumor
0.5
545
Tumor
0.5
383
Tumor
0.4
981
Tumor
0.4
127
Tumor
0.4
355
Tumor
0.4
743
Tumor
0.4
171
Tumor
0.4
391
Tumor
0.4
351
Tumor
0.4
463
Tumor
0.4
131
Tumor
0.4
497
Tumor
0.4
327
Tumor
0.3
861
Tumor
0.3
923
Tumor
0.3
277
Tumor
0.3
965
Tumor
0.3
451
Tumor
0.3
814
Normal
0.3
865
Tumor
0.3
211
Tumor
0.3
955
Tumor
0.3
331
Tumor
0.3
478
Normal
0.3
867
Tumor
0.3
395
Tumor
0.3
267
Tumor
0.3
283
Tumor
0.3
967
Tumor
0.3
917
Tumor
0.3
415
Tumor
0.3
554
Normal
0.3
313
Tumor
0.3
427
Tumor
0.2
387
Tumor
0.2
963
Tumor
0.2
467
Tumor
0.2
873
Tumor
0.2
572
Normal
0.2
863
Tumor
0.2
462
Normal
0.2
534
Normal
0.2
482
Normal
0.2
785
Tumor
0.2
535
Tumor
0.2
498
Normal
0.2
924
Normal
0.2
984
Normal
0.2
426
Normal
0.2
721
Tumor
0.2
484
Normal
0.2
913
Tumor
0.2
411
Tumor
0.2
746
Normal
0.2
344
Normal
0.2
523
Tumor
0.2
473
Tumor
0.2
444
Normal
0.2
558
Normal
0.2
481
Tumor
0.1
464
Normal
0.1
951
Tumor
0.1
384
Normal
0.1
647
Tumor
0.1
412
Normal
0.1
943
Tumor
0.1
386
Normal
0.1
447
Tumor
0.1
487
Tumor
0.1
866
Normal
0.1
744
Normal
0.1
786
Normal
0.1
352
Normal
0.1
957
Tumor
0.1
513
Tumor
0.1
954
Normal
0.1
396
Normal
0.1
187
Tumor
0.1
1013
Tumor
0.1
492
Normal
0.1
468
Normal
0.1
488
Normal
0.1
862
Normal
0.1
958
Normal
0.1
686
Normal
0.1
538
Normal
0.1
364
Normal
0.1
142
Normal
0.1
141
Tumor
0.1
353
Tumor
0.1
342
Normal
0.1
524
Normal
0.1
816
Normal
0.1
114
Normal
0.1
356
Normal
0.1
136
Normal
0.1
1015
Tumor
0.1
312
Normal
0.1
568
Normal
0.1
672
Normal
0.1
938
Normal
0.1
648
Normal
0.1
388
Normal
0.1
268
Normal
0.1
466
Normal
0.1
126
Normal
0.1
546
Normal
0.1
536
Normal
0.1
218
Normal
0.1
1032
Normal
0.1
664
Normal
0.1
161
Tumor
0.1
1041
Tumor
0.1
392
Normal
0.1
472
Normal
0.1
376
Normal
0.1
147
Tumor
0.1
518
Normal
0.1
778
Normal
0.1
448
Normal
0.1
516
Normal
0.1
433
Tumor
0.1
192
Normal
0.1
944
Normal
0.0
354
Normal
0.0
662
Normal
0.0
756
Normal
0.0
365
Tumor
0.0
361
Tumor
0.0
311
Tumor
0.0
297
Tumor
0.0
212
Normal
0.0
414
Normal
0.0
188
Normal
0.0
966
Normal
0.0
874
Normal
0.0
696
Normal
0.0
452
Normal
0.0
1031
Tumor
0.0
1016
Normal
0.0
135
Tumor
0.0
362
Normal
0.0
916
Normal
0.0
1014
Normal
0.0
968
Normal
0.0
528
Normal
0.0
514
Normal
0.0
111
Normal
0.0
665
Tumor
0.0
358
Normal
0.0
716
Normal
0.0
222
Normal
0.0
272
Normal
0.0
124
Normal
0.0
918
Normal
0.0
394
Normal
0.0
456
Normal
0.0
262
Normal
0.0
878
Normal
0.0
864
Normal
0.0
278
Normal
0.0
162
Normal
0.0
474
Normal
0.0
328
Normal
0.0
132
Normal
0.0
145
Tumor
0.0
432
Normal
0.0
128
Normal
0.0
564
Normal
0.0
493
Tumor
0.0
956
Normal
0.0
976
Normal
0.0
574
Normal
0.0
881
Tumor
0.0
723
Tumor
0.0
964
Normal
0.0
138
Normal
0.0
714
Normal
0.0
416
Normal
0.0
286
Normal
0.0
186
Normal
0.0
952
Normal
0.0
926
Normal
0.0
357
Tumor
0.0
494
Normal
0.0
533
Tumor
0.0
666
Normal
0.0
185
Tumor
0.0
953
Tumor
0.0
285
Tumor
0.0
1022
Normal
0.0
978
Normal
0.0
636
Normal
0.0
824
Normal
0.0
661
Tumor
-0.1
491
Tumor
-0.1
526
Normal
-0.1
983
Tumor
-0.1
1028
Normal
-0.1
455
Tumor
-0.1
628
Normal
-0.1
745
Tumor
-0.1
1042
Normal
-0.1
146
Normal
-0.1
434
Normal
-0.1
148
Normal
-0.1
517
Tumor
-0.1
852
Normal
-0.1
368
Normal
-0.1
883
Tumor
-0.1
172
Normal
-0.1
385
Tumor
-0.1
922
Normal
-0.1
982
Normal
-0.1
298
Normal
-0.1
616
Normal
-0.1
868
Normal
-0.1
914
Normal
-0.1
571
Tumor
-0.1
911
Tumor
-0.1
284
Normal
-0.1
818
Normal
-0.1
1044
Normal
-0.1
618
Normal
-0.1
231
Tumor
-0.1
112
Tumor
-0.1
271
Tumor
-0.1
738
Normal
-0.1
698
Normal
-0.1
228
Normal
-0.1
436
Normal
-0.1
366
Normal
-0.1
422
Normal
-0.1
314
Normal
-0.1
258
Normal
-0.1
857
Tumor
-0.1
424
Normal
-0.1
937
Tumor
-0.1
224
Normal
-0.1
428
Normal
-0.1
217
Tumor
-0.1
722
Normal
-0.1
1026
Normal
-0.1
742
Normal
-0.1
882
Normal
-0.1
858
Normal
-0.1
445
Tumor
-0.1
975
Tumor
-0.1
191
Tumor
-0.1
553
Tumor
-0.1
332
Normal
-0.1
465
Tumor
-0.1
425
Tumor
-0.2
196
Normal
-0.2
214
Normal
-0.2
483
Tumor
-0.2
461
Tumor
-0.2
617
Tumor
-0.2
563
Tumor
-0.2
815
Tumor
-0.2
642
Normal
-0.2
1045
Tumor
-0.2
884
Normal
-0.2
912
Normal
-0.2
431
Tumor
-0.2
1046
Normal
-0.2
223
Tumor
-0.2
663
Tumor
-0.2
728
Normal
-0.2
446
Normal
-0.2
367
Tumor
-0.2
232
Normal
-0.2
635
Tumor
-0.2
697
Tumor
-0.2
877
Tumor
-0.2
915
Tumor
-0.3
537
Tumor
-0.3
823
Tumor
-0.3
713
Tumor
-0.3
671
Tumor
-0.3
423
Tumor
-0.3
125
Tumor
-0.3
341
Tumor
-0.3
435
Tumor
-0.3
525
Tumor
-0.3
727
Tumor
-0.3
1027
Tumor
-0.3
375
Tumor
-0.3
421
Tumor
-0.3
557
Tumor
-0.3
213
Tumor
-0.4
137
Tumor
-0.4
477
Tumor
-0.4
737
Tumor
-0.4
1043
Tumor
-0.4
221
Tumor
-0.4
627
Tumor
-0.4
925
Tumor
-0.4
195
Tumor
-0.4
1021
Tumor
-0.5
1025
Tumor
-0.5
363
Tumor
-0.5
227
Tumor
-0.5
567
Tumor
-0.5
921
Tumor
-0.5
817
Tumor
-0.5
343
Tumor
-0.5
695
Tumor
-0.5
515
Tumor
-0.5
573
Tumor
-0.5
851
Tumor
-0.5
257
Tumor
-0.6
471
Tumor
-0.6
641
Tumor
-0.6
443
Tumor
-0.7
615
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
