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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1I1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
103.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
63.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
3.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1I1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
113.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
87.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
84.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
77.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
76.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
74.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
74.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
70.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
70.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
70.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
69.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
66.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
66.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
62.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
62.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
59.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
58.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
57.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
56.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
56.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
56.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
55.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
54.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
52.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
52.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
51.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
50.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
50.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
49.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
49.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
47.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
47.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
47.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
47.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
46.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
46.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
45.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
45.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
45.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
45.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
45.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
45.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
44.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
44.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
43.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
43.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
42.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
42.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
42.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
41.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
41.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
41.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
41.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
40.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
40.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
39.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
39.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
39.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
38.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
38.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
38.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
38.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
38.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
38.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
37.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
37.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
37.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
37.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
37.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
37.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
36.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
35.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
35.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
35.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
35.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
34.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
34.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
34.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
34.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
34.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
33.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
33.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
33.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
33.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
33.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
32.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
32.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
32.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
31.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
31.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
31.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
30.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
30.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
29.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
29.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
29.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
28.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
28.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
27.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
27.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
27.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
27.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
27.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
27.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
27.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
26.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
26.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
25.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
25.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
25.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
25.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
25.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
25.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
24.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
24.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
23.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
23.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
23.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
22.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
22.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
22.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
22.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
21.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
21.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
20.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
20.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
20.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
20.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
20.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
19.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
17.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
17.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
17.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
16.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
15.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
14.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
13.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
12.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
9.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
7.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
7.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
7.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
6.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
6.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
5.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
5.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
5.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
5.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
4.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
4.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
4.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
3.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
2.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1I1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
64.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
57.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
47.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
33.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
32.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
28.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
24.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
24.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
24.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
21.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
20.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
16.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
14.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
9.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
9.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
8.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
8.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
7.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
7.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
7.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
6.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
6.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
4.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
4.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
3.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
2.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
2.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
2.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
2.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
1.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1I1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
50.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
47.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
45.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
45.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
37.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
35.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
33.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
31.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
30.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
29.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
27.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
23.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
19.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
19.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
11.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
10.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
8.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
7.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
6.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
6.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
6.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
6.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
6.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
5.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
5.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
5.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
5.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
5.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
4.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
4.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
4.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
4.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
4.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
4.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
4.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
4.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
3.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
3.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
3.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
3.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
3.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
3.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
3.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
3.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
2.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
2.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
2.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
2.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
2.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
2.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
2.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
2.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
2.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
2.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
2.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
2.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
2.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
2.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
2.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
2.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
1.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
1.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
1.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
1.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
1.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
1.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
1.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
1.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
0.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011240003
Tumor
1.8
CPT0066480003
Tumor
1.7
CPT0010120001
Normal
1.3
CPT0001270001
Normal
1.1
CPT0015910003
Tumor
1.1
CPT0079510001
Normal
1.0
CPT0075720003
Tumor
0.9
CPT0086870003
Tumor
0.8
CPT0088630003
Tumor
0.7
CPT0086970003
Normal
0.7
CPT0092190003
Normal
0.7
CPT0088760003
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0075560003
Tumor
0.7
CPT0000660001
Normal
0.6
CPT0007470001
Normal
0.6
CPT0002370001
Normal
0.6
CPT0081990003
Tumor
0.6
CPT0025170003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0019160001
Normal
0.6
CPT0020130001
Normal
0.5
CPT0012670003
Tumor
0.5
CPT0018250001
Normal
0.5
CPT0078530001
Normal
0.5
CPT0065820001
Normal
0.5
CPT0000890001
Normal
0.5
CPT0081600003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0085670003
Tumor
0.5
CPT0084590001
Normal
0.5
CPT0063640001
Normal
0.5
CPT0086830003
Normal
0.4
CPT0077490003
Tumor
0.4
CPT0012920003
Normal
0.4
CPT0006530001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0069010001
Normal
0.4
CPT0001550001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0092800003
Normal
0.4
CPT0012290003
Normal
0.4
CPT0012080003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0023360001
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0065870003
Tumor
0.3
CPT0064400001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0078940001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0088570001
Normal
0.3
CPT0007870001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0079300001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0066520001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0001510001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0020120003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0082010001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0023690003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0089460004
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0006630003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0065430003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0001220008
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0063630003
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0009060003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0010110003
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0001260009
Tumor
-0.6
CPT0092290003
Tumor
-0.6
CPT0009000003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0078660003
Tumor
-0.6
CPT0069160003
Tumor
-0.6
CPT0077110003
Tumor
-0.7
CPT0001540009
Tumor
-0.8
CPT0026410003
Tumor
-0.8
CPT0086360003
Tumor
-0.8
CPT0078990003
Tumor
-0.8
CPT0012550003
Tumor
-0.8
CPT0064370003
Tumor
-0.9
CPT0002270011
Tumor
-0.9
CPT0088550004
Tumor
-0.9
CPT0014160003
Tumor
-1.1
CPT0001500009
Tumor
-1.1
CPT0065810003
Tumor
-1.2
CPT0086950003
Tumor
-1.2
CPT0079180003
Tumor
-1.2
CPT0081880003
Tumor
-1.2
CPT0023350003
Tumor
-1.3
CPT0024670003
Tumor
-1.3
CPT0025050003
Tumor
-1.3
CPT0088970003
Tumor
-1.3
CPT0001340003
Tumor
-1.3
CPT0014450004
Tumor
-1.4
CPT0015730003
Tumor
-1.5
CPT0076330003
Tumor
-1.6
CPT0011410003
Tumor
-1.6
CPT0078800003
Tumor
-1.6
CPT0012180003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
