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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC11A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
124.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
245.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
227.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
202.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
191.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
184.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
174.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
172.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
172.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
171.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
171.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
170.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
168.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
167.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
161.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
158.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
157.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
151.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
145.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
143.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
141.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
136.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
135.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
134.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
133.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
126.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
125.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
122.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
121.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
119.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
118.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
117.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
115.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
114.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
110.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
109.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
106.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
105.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
105.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
103.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
103.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
102.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
102.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
101.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
101.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
101.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
100.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
100.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
99.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
98.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
97.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
97.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
95.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
94.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
91.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
86.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
85.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
84.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
82.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
81.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
80.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
71.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
70.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
51.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC11A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
130.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
335.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
255.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
244.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
233.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
231.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
223.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
216.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
213.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
212.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
211.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
206.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
205.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
203.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
202.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
202.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
200.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
198.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
197.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
196.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
195.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
192.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
192.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
192.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
190.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
189.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
189.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
188.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
185.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
185.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
184.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
184.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
183.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
183.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
180.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
180.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
179.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
179.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
178.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
178.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
177.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
177.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
177.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
176.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
176.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
176.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
176.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
176.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
175.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
175.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
174.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
174.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
174.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
173.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
173.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
172.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
172.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
172.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
171.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
171.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
171.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
170.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
170.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
169.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
168.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
168.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
167.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
167.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
167.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
167.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
166.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
165.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
165.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
165.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
165.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
165.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
164.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
164.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
164.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
163.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
163.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
163.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
163.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
162.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
162.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
162.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
161.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
161.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
160.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
160.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
160.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
160.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
159.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
159.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
157.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
157.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
157.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
157.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
157.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
157.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
156.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
156.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
156.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
156.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
156.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
156.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
156.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
156.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
155.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
155.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
155.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
155.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
155.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
155.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
155.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
155.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
154.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
154.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
154.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
153.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
153.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
153.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
153.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
153.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
152.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
152.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
152.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
152.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
152.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
151.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
151.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
151.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
151.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
151.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
151.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
151.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
150.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
150.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
150.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
150.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
150.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
150.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
150.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
150.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
149.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
149.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
149.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
149.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
149.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
149.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
148.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
148.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
148.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
148.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
148.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
148.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
148.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
147.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
147.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
147.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
147.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
147.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
147.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
147.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
147.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
147.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
147.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
147.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
146.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
146.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
146.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
146.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
146.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
146.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
145.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
145.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
145.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
145.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
145.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
145.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
145.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
144.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
144.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
144.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
144.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
144.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
143.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
143.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
143.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
143.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
143.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
142.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
142.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
142.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
142.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
142.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
142.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
142.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
142.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
142.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
142.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
142.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
142.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
141.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
141.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
141.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
141.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
141.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
140.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
140.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
140.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
140.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
140.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
140.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
140.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
140.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
140.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
140.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
140.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
139.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
139.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
139.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
139.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
139.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
139.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
139.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
139.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
139.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
138.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
138.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
138.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
138.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
138.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
137.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
137.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
137.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
137.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
137.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
137.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
137.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
137.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
137.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
136.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
136.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
136.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
136.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
136.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
135.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
135.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
135.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
135.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
135.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
135.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
134.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
134.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
134.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
134.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
134.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
133.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
133.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
133.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
133.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
133.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
133.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
133.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
132.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
132.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
132.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
131.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
131.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
131.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
131.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
131.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
130.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
130.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
130.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
130.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
129.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
129.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
129.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
129.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
129.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
128.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
128.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
128.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
128.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
128.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
128.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
128.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
127.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
127.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
127.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
127.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
127.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
127.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
127.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
126.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
126.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
126.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
126.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
126.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
126.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
125.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
125.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
125.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
125.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
125.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
125.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
125.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
124.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
124.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
124.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
124.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
124.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
124.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
124.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
123.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
123.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
123.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
123.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
123.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
122.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
122.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
122.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
122.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
121.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
121.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
121.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
121.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
121.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
121.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
120.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
120.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
120.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
120.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
120.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
120.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
120.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
119.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
119.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
119.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
119.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
119.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
119.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
118.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
118.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
118.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
118.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
117.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
117.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
117.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
117.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
117.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
117.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
117.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
117.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
116.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
116.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
116.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
116.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
115.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
114.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
114.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
114.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
114.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
114.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
113.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
113.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
112.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
112.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
112.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
112.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
111.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
111.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
111.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
110.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
110.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
110.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
110.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
110.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
109.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
109.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
109.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
109.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
109.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
108.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
108.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
108.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
108.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
107.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
107.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
107.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
107.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
107.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
106.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
106.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
106.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
105.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
105.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
105.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
105.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
103.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
103.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
103.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
103.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
103.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
103.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
102.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
102.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
102.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
101.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
101.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
101.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
100.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
100.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
100.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
99.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
99.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
99.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
99.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
99.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
98.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
98.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
98.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
97.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
97.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
97.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
97.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
96.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
96.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
95.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
95.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
95.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
95.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
94.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
94.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
93.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
92.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
91.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
91.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
91.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
91.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
91.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
91.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
90.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
90.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
89.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
89.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
89.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
89.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
88.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
88.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
88.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
88.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
88.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
87.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
87.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
86.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
86.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
86.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
85.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
84.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
83.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
83.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
83.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
82.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
82.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
80.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
79.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
78.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
78.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
78.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
75.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
75.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
75.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
74.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
74.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
73.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
73.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
73.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
72.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
71.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
70.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
69.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
69.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
69.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
68.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
68.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
67.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
66.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
65.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
64.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
64.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
63.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
63.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
63.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
62.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
62.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
60.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
59.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
59.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
59.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
58.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
58.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
56.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
56.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
55.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
55.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
53.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
53.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
52.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
51.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
47.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
46.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
43.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
43.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
42.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
42.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
40.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
38.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
26.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC11A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
158.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
296.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
266.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
257.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
251.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
235.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
217.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
217.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
214.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
207.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
200.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
192.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
189.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
189.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
188.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
184.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
184.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
182.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
181.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
180.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
179.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
177.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
176.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
175.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
173.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
173.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
172.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
171.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
171.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
170.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
170.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
170.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
170.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
168.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
168.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
167.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
167.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
167.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
166.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
165.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
165.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
164.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
164.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
163.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
162.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
158.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
158.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
158.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
158.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
157.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
157.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
156.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
155.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
154.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
154.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
154.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
153.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
153.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
152.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
152.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
151.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
150.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
149.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
147.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
147.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
147.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
147.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
146.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
146.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
145.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
144.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
144.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
142.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
140.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
140.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
139.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
138.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
138.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
137.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
136.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
136.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
135.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
135.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
134.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
133.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
130.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
127.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
127.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
126.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
121.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
117.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
116.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
116.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
114.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
110.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
105.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
87.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
83.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
82.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
79.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC11A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
121.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
233.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
226.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
225.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
206.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
205.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
199.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
196.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
193.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
193.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
192.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
192.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
191.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
190.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
190.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
189.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
187.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
183.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
183.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
182.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
182.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
182.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
182.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
182.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
180.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
180.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
180.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
178.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
177.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
177.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
176.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
175.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
174.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
174.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
174.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
171.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
167.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
165.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
165.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
164.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
164.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
163.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
163.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
162.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
160.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
159.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
159.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
159.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
158.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
157.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
157.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
157.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
156.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
154.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
154.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
154.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
154.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
154.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
153.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
153.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
152.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
151.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
151.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
150.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
148.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
148.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
148.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
147.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
147.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
147.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
146.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
146.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
146.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
146.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
145.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
143.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
141.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
140.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
140.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
139.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
139.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
139.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
139.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
138.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
138.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
138.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
138.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
137.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
137.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
137.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
136.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
136.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
135.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
135.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
134.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
134.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
134.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
133.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
133.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
133.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
133.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
133.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
133.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
133.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
132.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
132.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
132.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
132.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
131.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
130.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
130.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
129.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
129.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
129.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
128.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
128.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
128.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
128.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
127.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
127.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
126.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
126.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
126.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
126.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
125.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
124.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
124.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
123.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
123.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
123.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
122.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
120.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
120.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
120.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
120.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
120.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
120.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
119.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
118.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
118.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
118.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
118.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
118.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
118.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
116.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
116.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
115.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
114.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
114.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
113.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
113.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
113.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
113.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
112.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
111.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
111.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
111.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
111.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
110.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
110.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
110.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
110.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
110.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
110.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
109.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
109.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
109.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
108.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
108.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
108.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
107.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
106.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
106.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
106.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
105.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
104.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
104.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
104.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
104.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
104.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
103.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
103.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
103.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
102.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
102.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
102.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
102.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
102.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
102.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
101.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
101.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
101.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
101.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
101.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
99.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
99.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
98.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
98.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
98.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
98.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
97.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
97.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
97.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
97.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
97.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
97.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
96.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
96.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
96.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
96.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
96.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
96.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
94.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
93.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
93.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
93.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
92.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
92.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
92.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
91.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
91.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
91.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
90.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
90.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
90.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
89.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
89.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
88.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
88.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
87.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
87.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
87.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
87.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
86.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
86.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
85.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
85.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
85.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
84.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
84.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
84.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
83.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
83.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
83.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
80.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
79.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
78.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
78.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
77.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
77.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
77.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
77.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
76.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
76.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
75.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
74.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
73.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
72.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
72.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
70.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
70.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
69.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
69.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
68.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
67.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
67.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
64.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
62.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
61.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
60.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
59.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
59.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
57.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
55.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
54.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
54.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
48.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
45.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
42.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
40.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
36.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
36.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
33.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.1
CPT0012180003
Tumor
0.9
CPT0078510003
Tumor
0.7
CPT0092730003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0088550004
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0081880003
Tumor
0.5
CPT0007320003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0087040003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0025110003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0025050003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0020120003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0025580004
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0092190003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0065820001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0085670003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0086950003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0010160003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0026410003
Tumor
-0.4
CPT0012640003
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0009060003
Tumor
-0.4
CPT0012770003
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0077490003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0024680001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0079180003
Tumor
-0.5
CPT0009020003
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0011240003
Tumor
-0.7
CPT0012920003
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0017410003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.