HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.6 nTPM
HPA Brain:25.1 nTPM
GTEx:3.6 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:5.6 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
1855 Male, age 76, left hemisphere 25.0
1911 Female, age 85, right hemisphere 23.2
2529 Female, age 94, left hemisphere 23.2
2148 Female, age 91, left hemisphere 22.9
2621 Female, age 67, right hemisphere 22.9
1898 Male, age 80, left hemisphere 20.6
Dentate gyrus
nTPM: 22.6
2246 Female, age 85, both hemispheres 25.5
2010 Male, age 76, both hemispheres 24.1
2531 Female, age 67, both hemispheres 23.6
2528 Male, age 74, both hemispheres 22.2
1927 Female, age 91, both hemispheres 21.9
2530 Female, age 94, left hemisphere 18.3
Entorhinal gyrus
nTPM: 21.6
2117 Female, age 91, right hemisphere 25.7
1787 Male, age 76, left hemisphere 24.3
2613 Female, age 94, left hemisphere 21.7
2764 Male, age 80, right hemisphere 20.1
1938 Female, age 85, left hemisphere 19.6
2686 Male, age 75, right hemisphere 18.3
Hippocampus, CA1
nTPM: 22.4
2045 Male, age 76, both hemispheres 29.8
2527 Male, age 74, both hemispheres 23.1
2082 Female, age 91, right hemisphere 22.1
1873 Female, age 85, both hemispheres 21.8
2749 Male, age 80, left hemisphere 15.1
Hippocampus, CA2
nTPM: 22.4
2113 Female, age 91, right hemisphere 25.7
2437 Female, age 94, left hemisphere 23.6
1940 Female, age 85, left hemisphere 23.2
1892 Male, age 76, both hemispheres 22.9
1963 Male, age 80, left hemisphere 20.0
2249 Male, age 74, both hemispheres 19.2
Hippocampus, CA3
nTPM: 23.3
2436 Male, age 74, both hemispheres 27.8
1891 Female, age 85, both hemispheres 26.0
1867 Male, age 76, both hemispheres 22.7
2620 Female, age 94, left hemisphere 22.7
2861 Female, age 67, both hemispheres 21.9
2137 Male, age 80, left hemisphere 18.6
Parahippocampal cortex
nTPM: 21.3
2018 Male, age 76, both hemispheres 27.5
1933 Female, age 85, both hemispheres 23.3
2250 Female, age 67, right hemisphere 22.8
2692 Male, age 74, both hemispheres 22.0
1990 Female, age 91, right hemisphere 21.9
2622 Female, age 67, right hemisphere 21.7
2693 Female, age 94, both hemispheres 21.6
1850 Male, age 80, both hemispheres 18.3
2245 Female, age 91, both hemispheres 18.0
2532 Female, age 72, left hemisphere 15.9
Perirhinal gyrus
nTPM: 18.5
2848 Male, age 76, right hemisphere 19.7
1847 Female, age 91, left hemisphere 19.6
2521 Female, age 94, right hemisphere 19.3
1841 Female, age 85, right hemisphere 17.1
1794 Male, age 80, right hemisphere 16.9
Subiculum
nTPM: 25.1
2042 Male, age 76, both hemispheres 29.2
2438 Female, age 94, left hemisphere 26.9
2729 Female, age 91, right hemisphere 26.8
2619 Male, age 74, both hemispheres 25.8
1977 Female, age 85, both hemispheres 21.2
1901 Male, age 80, both hemispheres 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.6
Samples: 197

Max nTPM: 9.2
Min nTPM: 0.8
Std nTPM: 1.3
Median nTPM: 3.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 9.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 8.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 7.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 7.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 6.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 6.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 6.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 6.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 6.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 6.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 5.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.5
FF:10153-102I9 76 years, female 27.3
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.2
Pig sample Sample description nTPM
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 20.1
Min nTPM: 15.3
Sample A Female 20.1
Sample B Female 17.3
Sample C Male 15.3
Sample D Male 15.8
Dorsal hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 20.7
Min nTPM: 18.4
Sample A Female 20.4
Sample B Female 18.4
Sample C Male 19.1
Sample D Male 20.7
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 25.8
Min nTPM: 16.4
Sample A Female 19.7
Sample B Female 25.8
Sample C Male 19.0
Sample D Male 16.4
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 17.6
Sample A Female 17.6
Sample B Female 19.5
Sample C Male 18.2
Sample D Male 18.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.6
Sample A Male 3.0
Sample B Male 3.2
Sample C Female 2.6
Sample D Female 4.8
Hippocampal formation
nTPM: 5.6
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.5
Sample A Male 6.2
Sample B Male 5.4
Sample C Female 4.5
Sample D Female 6.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
69080505 Antisense, RP_050324_02_B06, Mouse strain C57BL/6J (56 days, male) 5.3

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