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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JDP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
55.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
41.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
33.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
29.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
28.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
25.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
21.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
11.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
3.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JDP2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
251.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
138.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
86.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
79.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
61.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
60.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
59.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
55.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
53.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
53.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
51.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
51.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
49.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
48.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
48.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
48.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
47.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
46.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
45.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
44.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
44.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
44.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
43.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
42.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
42.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
42.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
41.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
41.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
41.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
39.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
38.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
38.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
38.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
38.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
37.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
37.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
36.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
36.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
36.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
35.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
35.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
35.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
34.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
34.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
34.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
34.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
33.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
33.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
32.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
32.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
32.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
32.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
32.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
32.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
31.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
31.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
31.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
30.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
30.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
30.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
30.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
30.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
30.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
30.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
30.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
30.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
29.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
29.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
29.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
28.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
28.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
28.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
28.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
27.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
27.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
27.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
27.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
27.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
26.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
26.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
25.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
24.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
24.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
24.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
23.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
22.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
22.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
22.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
22.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
21.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
21.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
21.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
21.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
21.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
20.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
18.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
18.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
18.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
17.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
15.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
10.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
8.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
6.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
5.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
5.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
4.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
4.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JDP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
79.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
42.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
40.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
39.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
39.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
38.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
36.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
36.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
29.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
28.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
28.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
28.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
28.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
24.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
20.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
8.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
5.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
5.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
4.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
2.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JDP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
46.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
46.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
38.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
34.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
34.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
34.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
29.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
29.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
28.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
26.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
25.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
24.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
23.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
23.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
22.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
14.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
13.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
10.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
10.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
10.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
10.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
9.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
9.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
9.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
8.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
8.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
8.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
8.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
7.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
7.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
6.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
6.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
6.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
6.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
6.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
6.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
6.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
5.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
5.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
5.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
5.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
5.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
4.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
4.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
4.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
4.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
4.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
3.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
3.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
2.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
2.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
1.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
