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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DCAF5 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
27.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
25.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
23.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
22.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
21.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
20.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
19.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
19.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
19.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
19.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
18.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
18.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
17.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
17.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
17.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
17.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
17.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
16.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
15.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
15.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
15.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
15.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
14.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
14.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
14.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
14.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
13.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
13.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
13.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
12.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
12.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
12.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
12.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
12.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
12.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
11.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
11.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
11.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
11.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
11.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
11.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
11.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
10.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
9.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
9.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
8.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
8.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
8.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
8.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
8.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
7.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
7.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
5.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
5.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
5.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
4.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
3.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DCAF5 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.9
Number of samples
231
Samples
Sample
Description
TPM
DO50815
0 years, male, NA, stage:3, alive, 150 days
34.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
32.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
27.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
26.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
26.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
24.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
24.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
24.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
21.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
21.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
20.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
19.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
19.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
18.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
18.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
18.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
17.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
17.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
17.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
17.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
17.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
17.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
16.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
16.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
15.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
15.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
15.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
15.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
15.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
14.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
14.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
14.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
14.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
14.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
14.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
14.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
14.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
14.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
14.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
14.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
13.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
13.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
13.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
12.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
12.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
12.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
12.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
12.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
11.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
11.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
10.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
10.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
10.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
10.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
10.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
10.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
10.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
9.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
9.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
9.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
8.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
7.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
7.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
5.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
957
Tumor
0.8
393
Tumor
0.7
365
Tumor
0.7
715
Tumor
0.7
813
Tumor
0.7
435
Tumor
0.6
145
Tumor
0.6
445
Tumor
0.6
745
Tumor
0.6
534
Normal
0.6
472
Normal
0.5
981
Tumor
0.5
818
Normal
0.5
918
Normal
0.5
482
Normal
0.5
497
Tumor
0.5
616
Normal
0.5
966
Normal
0.5
944
Normal
0.5
1042
Normal
0.5
477
Tumor
0.5
431
Tumor
0.5
786
Normal
0.5
955
Tumor
0.5
924
Normal
0.5
642
Normal
0.5
943
Tumor
0.5
965
Tumor
0.4
536
Normal
0.4
313
Tumor
0.4
518
Normal
0.4
737
Tumor
0.4
914
Normal
0.4
572
Normal
0.4
353
Tumor
0.4
1032
Normal
0.4
396
Normal
0.4
546
Normal
0.4
484
Normal
0.4
526
Normal
0.4
743
Tumor
0.4
574
Normal
0.4
455
Tumor
0.4
1046
Normal
0.4
461
Tumor
0.4
564
Normal
0.4
618
Normal
0.4
222
Normal
0.4
523
Tumor
0.4
636
Normal
0.4
728
Normal
0.4
471
Tumor
0.4
742
Normal
0.4
882
Normal
0.4
478
Normal
0.4
912
Normal
0.4
627
Tumor
0.4
868
Normal
0.4
858
Normal
0.4
884
Normal
0.4
814
Normal
0.4
126
Normal
0.4
148
Normal
0.4
514
Normal
0.4
132
Normal
0.4
513
Tumor
0.4
926
Normal
0.3
524
Normal
0.3
1022
Normal
0.3
723
Tumor
0.3
462
Normal
0.3
474
Normal
0.3
328
Normal
0.3
874
Normal
0.3
481
Tumor
0.3
917
Tumor
0.3
938
Normal
0.3
114
Normal
0.3
824
Normal
0.3
922
Normal
0.3
111
Normal
0.3
392
Normal
0.3
131
Tumor
0.3
128
Normal
0.3
975
Tumor
0.3
492
Normal
0.3
982
Normal
0.3
554
Normal
0.3
416
Normal
0.3
968
Normal
0.3
741
Tumor
0.3
364
Normal
0.3
1043
Tumor
0.3
136
Normal
0.3
861
Tumor
0.3
1016
Normal
0.3
366
Normal
0.3
386
Normal
0.3
528
Normal
0.3
816
Normal
0.3
188
Normal
0.3
162
Normal
0.3
221
Tumor
0.3
617
Tumor
0.3
412
Normal
0.3
695
Tumor
0.3
958
Normal
0.3
447
Tumor
0.3
172
Normal
0.3
911
Tumor
0.3
195
Tumor
0.3
297
Tumor
0.3
285
Tumor
0.2
672
Normal
0.2
464
Normal
0.2
857
Tumor
0.2
428
Normal
0.2
956
Normal
0.2
516
Normal
0.2
964
Normal
0.2
628
Normal
0.2
615
Tumor
0.2
1026
Normal
0.2
664
Normal
0.2
533
Tumor
0.2
864
Normal
0.2
865
Tumor
0.2
852
Normal
0.2
138
Normal
0.2
1044
Normal
0.2
422
Normal
0.2
568
Normal
0.2
1041
Tumor
0.2
866
Normal
0.2
312
Normal
0.2
662
Normal
0.2
558
Normal
0.2
456
Normal
0.2
756
Normal
0.2
298
Normal
0.2
976
Normal
0.2
1028
Normal
0.2
331
Tumor
0.2
714
Normal
0.2
278
Normal
0.2
286
Normal
0.2
127
Tumor
0.2
648
Normal
0.2
424
Normal
0.2
232
Normal
0.2
125
Tumor
0.2
272
Normal
0.2
663
Tumor
0.2
666
Normal
0.2
362
Normal
0.2
191
Tumor
0.2
538
Normal
0.2
186
Normal
0.2
376
Normal
0.2
258
Normal
0.2
978
Normal
0.2
696
Normal
0.2
881
Tumor
0.2
727
Tumor
0.2
494
Normal
0.2
448
Normal
0.2
361
Tumor
0.1
426
Normal
0.1
414
Normal
0.1
262
Normal
0.1
388
Normal
0.1
498
Normal
0.1
436
Normal
0.1
738
Normal
0.1
112
Tumor
0.1
878
Normal
0.1
916
Normal
0.1
862
Normal
0.1
952
Normal
0.1
261
Tumor
0.1
778
Normal
0.1
394
Normal
0.1
218
Normal
0.1
267
Tumor
0.1
342
Normal
0.1
877
Tumor
0.1
228
Normal
0.1
697
Tumor
0.1
698
Normal
0.1
446
Normal
0.1
954
Normal
0.1
641
Tumor
0.1
468
Normal
0.1
867
Tumor
0.1
268
Normal
0.1
368
Normal
0.1
135
Tumor
0.1
284
Normal
0.1
124
Normal
0.1
527
Tumor
0.1
716
Normal
0.1
357
Tumor
0.1
146
Normal
0.1
777
Tumor
0.1
746
Normal
0.1
1014
Normal
0.1
444
Normal
0.1
196
Normal
0.1
466
Normal
0.1
212
Normal
0.1
984
Normal
0.1
354
Normal
0.1
411
Tumor
0.1
953
Tumor
0.1
724
Normal
0.1
553
Tumor
0.1
227
Tumor
0.1
722
Normal
0.1
785
Tumor
0.0
384
Normal
0.0
113
Tumor
0.0
214
Normal
0.0
356
Normal
0.0
452
Normal
0.0
467
Tumor
0.0
311
Tumor
0.0
744
Normal
0.0
1027
Tumor
0.0
314
Normal
0.0
271
Tumor
0.0
488
Normal
0.0
352
Normal
0.0
671
Tumor
0.0
415
Tumor
0.0
755
Tumor
0.0
327
Tumor
0.0
142
Normal
0.0
192
Normal
0.0
1025
Tumor
0.0
434
Normal
0.0
1031
Tumor
0.0
351
Tumor
-0.1
385
Tumor
-0.1
224
Normal
-0.1
557
Tumor
-0.1
915
Tumor
-0.1
463
Tumor
-0.1
967
Tumor
-0.1
147
Tumor
-0.1
685
Tumor
-0.1
686
Normal
-0.1
375
Tumor
-0.1
383
Tumor
-0.1
963
Tumor
-0.1
545
Tumor
-0.1
515
Tumor
-0.1
332
Normal
-0.1
423
Tumor
-0.2
563
Tumor
-0.2
358
Normal
-0.2
863
Tumor
-0.2
517
Tumor
-0.2
873
Tumor
-0.2
277
Tumor
-0.2
363
Tumor
-0.2
355
Tumor
-0.2
493
Tumor
-0.2
817
Tumor
-0.2
341
Tumor
-0.2
231
Tumor
-0.2
937
Tumor
-0.2
883
Tumor
-0.2
473
Tumor
-0.2
185
Tumor
-0.2
421
Tumor
-0.2
344
Normal
-0.2
571
Tumor
-0.2
823
Tumor
-0.2
211
Tumor
-0.2
491
Tumor
-0.2
141
Tumor
-0.2
137
Tumor
-0.2
395
Tumor
-0.2
535
Tumor
-0.2
413
Tumor
-0.3
432
Normal
-0.3
713
Tumor
-0.3
923
Tumor
-0.3
465
Tumor
-0.3
1013
Tumor
-0.3
1045
Tumor
-0.3
913
Tumor
-0.3
187
Tumor
-0.3
815
Tumor
-0.3
921
Tumor
-0.3
721
Tumor
-0.3
483
Tumor
-0.3
257
Tumor
-0.4
451
Tumor
-0.4
427
Tumor
-0.4
1015
Tumor
-0.4
213
Tumor
-0.4
343
Tumor
-0.4
433
Tumor
-0.4
635
Tumor
-0.4
647
Tumor
-0.5
1021
Tumor
-0.5
661
Tumor
-0.5
525
Tumor
-0.5
443
Tumor
-0.5
161
Tumor
-0.5
217
Tumor
-0.6
391
Tumor
-0.6
567
Tumor
-0.6
951
Tumor
-0.6
537
Tumor
-0.6
665
Tumor
-0.6
425
Tumor
-0.7
851
Tumor
-0.7
283
Tumor
-0.8
983
Tumor
-0.8
925
Tumor
-0.8
123
Tumor
-0.8
171
Tumor
-0.9
977
Tumor
-0.9
387
Tumor
-1.0
223
Tumor
-1.0
487
Tumor
-1.0
573
Tumor
-1.2
367
Tumor
-1.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
