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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS33A is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.1
Number of samples
254
Samples
Sample
Description
TPM
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
12.8
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
12.7
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
11.9
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
11.9
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
11.9
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
11.9
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
11.8
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
11.7
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
11.3
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
11.3
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
11.2
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
11.1
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
11.1
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
11.0
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
10.9
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
10.8
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
10.7
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
10.7
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
10.6
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
10.6
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
10.6
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.6
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
10.4
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
10.3
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
10.2
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
10.1
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
10.0
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
10.0
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
10.0
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
9.8
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
9.8
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
9.8
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
9.7
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
9.6
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
9.6
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
9.6
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
9.6
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
9.5
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
9.5
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
9.5
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
9.5
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
9.5
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
9.4
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
9.4
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
9.4
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
9.4
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
9.3
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
9.2
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
9.1
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
9.1
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
9.1
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
9.0
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
8.9
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
8.9
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
8.8
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
8.8
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
8.7
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
8.7
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
8.7
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
8.6
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
8.6
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
8.6
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
8.6
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
8.6
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
8.6
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
8.5
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
8.5
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
8.4
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
8.4
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
8.3
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
8.3
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
8.2
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
8.2
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
8.2
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
8.2
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
8.2
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
8.2
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
8.2
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
8.1
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
8.0
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
8.0
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
8.0
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
8.0
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
8.0
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
8.0
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
8.0
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
8.0
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
8.0
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
7.9
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
7.9
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
7.9
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
7.8
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
7.8
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
7.8
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
7.8
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
7.7
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
7.7
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
7.7
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
7.7
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
7.7
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
7.7
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
7.7
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
7.7
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
7.6
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
7.6
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
7.6
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
7.6
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
7.5
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
7.5
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
7.5
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
7.5
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
7.4
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
7.4
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
7.4
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
7.4
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
7.4
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
7.4
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
7.3
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
7.3
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
7.2
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
7.2
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
7.1
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
7.1
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
7.0
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
7.0
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
7.0
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
7.0
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
6.9
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
6.9
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
6.9
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
6.9
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
6.9
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
6.8
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
6.8
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
6.8
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
6.8
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
6.8
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
6.8
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
6.8
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
6.8
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
6.8
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
6.8
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
6.8
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
6.7
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
6.7
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
6.7
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
6.7
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
6.7
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
6.6
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
6.5
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
6.5
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
6.5
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
6.5
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
6.5
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
6.4
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
6.4
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
6.4
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
6.4
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
6.4
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
6.3
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
6.3
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
6.3
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
6.3
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
6.2
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
6.2
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
6.2
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
6.1
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
6.0
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
6.0
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
6.0
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
5.9
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
5.9
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
5.9
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
5.8
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
5.8
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
5.8
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
5.8
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
5.8
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
5.6
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
5.6
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
5.6
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
5.6
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
5.6
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
5.6
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
5.5
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
5.5
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
5.5
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
5.5
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
5.5
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
5.4
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
5.4
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
5.4
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
5.4
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
5.4
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
5.3
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
5.3
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
5.3
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
5.3
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
5.3
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
5.2
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
5.2
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
5.2
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
5.2
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
5.2
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
5.2
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
5.2
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
5.2
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
5.1
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
5.1
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
5.1
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
5.0
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
5.0
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
5.0
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
4.9
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.9
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
4.9
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
4.9
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
4.9
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
4.8
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
4.8
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
4.8
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
4.8
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
4.8
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
4.8
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
4.8
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
4.7
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
4.6
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
4.6
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
4.6
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
4.6
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
4.5
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
4.5
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
4.5
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
4.5
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
4.4
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
4.4
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
4.4
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
4.3
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
4.3
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
4.3
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
4.3
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
4.2
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
4.1
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
4.1
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
4.1
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
4.1
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
3.9
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
3.8
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
3.8
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
3.7
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
3.6
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
3.3
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
3.2
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS33A is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.3
Number of samples
486
Samples
Sample
Description
TPM
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
15.7
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
14.9
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
14.5
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
14.0
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
13.8
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
13.7
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
13.5
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
13.3
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
13.2
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
13.1
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
12.9
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
12.7
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
12.5
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
12.0
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
11.8
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
11.7
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
11.4
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
11.4
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
11.2
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
11.1
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
11.1
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
11.1
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
11.1
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
11.1
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
10.9
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
10.9
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
10.8
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
10.8
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
10.7
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
10.7
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
10.7
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
10.7
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
10.7
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
10.6
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
10.4
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
10.4
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
10.3
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
10.2
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
10.2
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
10.2
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
10.1
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
10.1
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
10.0
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
10.0
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
10.0
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
10.0
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
10.0
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
10.0
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
9.9
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
9.9
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
9.9
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
9.8
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
9.7
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
9.7
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
9.6
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
9.6
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
9.6
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
9.5
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
9.5
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
9.5
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
9.5
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
9.4
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
9.4
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
9.4
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
9.4
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
9.4
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
9.4
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
9.4
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
9.3
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
9.3
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
9.3
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
9.3
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
9.3
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
9.3
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
9.2
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
9.2
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
9.2
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
9.2
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
9.2
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
9.2
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
9.2
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
9.2
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
9.2
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
9.2
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
9.2
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
9.1
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
9.1
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
9.1
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
9.1
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
9.0
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
9.0
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
9.0
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
9.0
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
9.0
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
9.0
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
8.9
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
8.9
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
8.9
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
8.9
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
8.9
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
8.9
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
8.9
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
8.8
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
8.8
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
8.8
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
8.8
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
8.8
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
8.8
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
8.8
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
8.7
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
8.7
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
8.7
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
8.7
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
8.6
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
8.6
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
8.6
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
8.6
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
8.6
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
8.6
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
8.6
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
8.5
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
8.5
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
8.5
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
8.5
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
8.5
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
8.5
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
8.5
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
8.5
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
8.5
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
8.5
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
8.4
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
8.4
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
8.4
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
8.4
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
8.4
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
8.4
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
8.4
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
8.4
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
8.3
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
8.3
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
8.3
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
8.3
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
8.3
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
8.3
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
8.3
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
8.3
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
8.3
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
8.3
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
8.2
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
8.2
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
8.2
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
8.2
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
8.2
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
8.2
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
8.2
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
8.2
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
8.2
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
8.2
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
8.1
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
8.1
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
8.1
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
8.1
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
8.1
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
8.1
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
8.1
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
8.1
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
8.1
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
8.0
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
8.0
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
8.0
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
8.0
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
8.0
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
8.0
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
8.0
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
8.0
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
8.0
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
8.0
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
7.9
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
7.9
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
7.9
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
7.9
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
7.9
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
7.9
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
7.9
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
7.9
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
7.9
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
7.9
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
7.9
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
7.9
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
7.8
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
7.8
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
7.8
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
7.8
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
7.8
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
7.8
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
7.8
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
7.8
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
7.8
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
7.7
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
7.7
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
7.7
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
7.7
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
7.7
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
7.7
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
7.7
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
7.6
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
7.6
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
7.6
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
7.6
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
7.6
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
7.6
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
7.6
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
7.6
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
7.6
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
7.6
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
7.5
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
7.5
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
7.5
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
7.5
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
7.5
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
7.5
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
7.5
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
7.5
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
7.5
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
7.4
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
7.4
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
7.4
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
7.4
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
7.4
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
7.4
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
7.4
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
7.3
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
7.3
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
7.3
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
7.3
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
7.3
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
7.3
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
7.3
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
7.3
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
7.2
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
7.2
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
7.2
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
7.2
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
7.2
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
7.2
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
7.2
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
7.2
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
7.2
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
7.2
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
7.2
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
7.1
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
7.1
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
7.1
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
7.1
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
7.1
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
7.1
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
7.1
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
7.0
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
7.0
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
7.0
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
7.0
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
7.0
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
7.0
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
7.0
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
6.9
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
6.9
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
6.9
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
6.9
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
6.9
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
6.9
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
6.9
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
6.9
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
6.9
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
6.9
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
6.9
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
6.9
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
6.8
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
6.8
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
6.8
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
6.8
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
6.8
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
6.8
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
6.8
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
6.8
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
6.8
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
6.8
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
6.8
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
6.7
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
6.7
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
6.7
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
6.7
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
6.7
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
6.7
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
6.7
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
6.7
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
6.7
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
6.7
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
6.6
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
6.6
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
6.6
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
6.6
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
6.6
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
6.6
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
6.6
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
6.5
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
6.5
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
6.5
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
6.5
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
6.5
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
6.5
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
6.5
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
6.5
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
6.5
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
6.5
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
6.4
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
6.4
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
6.4
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
6.4
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
6.4
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
6.4
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
6.4
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
6.4
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
6.4
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
6.4
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
6.3
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
6.3
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
6.3
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
6.3
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
6.3
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
6.3
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
6.3
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
6.3
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
6.3
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
6.3
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
6.3
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
6.3
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
6.3
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
6.3
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
6.3
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
6.3
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
6.3
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
6.3
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
6.2
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
6.2
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
6.2
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
6.2
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
6.2
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
6.1
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
6.1
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
6.1
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
6.1
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
6.1
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
6.1
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
6.1
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
6.1
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
6.1
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
6.1
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
6.1
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
6.1
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
6.1
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
6.1
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
6.1
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
6.1
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
6.0
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
6.0
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
6.0
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
6.0
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
5.9
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
5.9
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
5.9
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
5.9
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
5.9
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
5.9
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
5.9
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
5.9
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
5.8
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
5.8
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
5.8
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
5.8
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
5.8
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
5.8
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
5.8
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
5.8
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
5.8
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
5.8
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
5.8
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
5.8
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
5.8
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
5.7
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
5.7
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
5.7
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
5.7
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
5.7
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
5.7
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
5.7
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
5.7
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
5.7
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
5.7
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
5.7
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
5.6
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
5.6
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
5.6
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
5.6
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
5.6
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
5.6
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
5.6
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
5.6
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
5.5
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
5.5
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
5.5
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
5.5
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
5.5
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
5.5
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
5.5
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
5.5
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
5.5
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
5.5
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
5.5
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
5.4
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
5.3
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
5.3
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
5.3
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
5.3
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
5.3
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
5.3
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
5.3
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
5.2
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
5.2
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
5.2
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
5.2
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
5.2
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
5.2
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
5.2
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
5.2
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
5.1
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
5.1
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
5.1
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
5.1
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
5.1
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
5.1
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
5.1
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
5.1
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
5.0
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
5.0
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
5.0
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
5.0
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
5.0
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
5.0
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
5.0
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
4.9
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
4.9
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
4.8
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
4.8
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
4.8
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
4.8
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
4.8
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
4.7
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
4.7
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
4.7
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
4.6
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
4.6
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
4.6
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
4.5
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
4.5
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
4.5
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
4.4
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
4.4
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
4.1
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
4.1
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
4.0
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
3.9
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
3.9
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
3.9
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
3.9
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
3.8
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
3.8
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
3.7
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
3.6
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
3.6
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
3.6
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
3.4
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
3.3
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
3.3
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
2.5
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS33A is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.3
Number of samples
88
Samples
Sample
Description
TPM
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
12.3
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
12.3
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
12.3
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
11.2
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
11.0
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
11.0
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
10.9
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
10.8
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
10.3
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
10.3
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
10.0
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
10.0
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
9.9
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
9.9
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
9.8
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
9.3
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
9.3
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
9.3
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
9.0
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
9.0
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
8.9
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
8.9
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
8.8
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
8.8
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
8.8
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
8.8
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
8.4
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
8.2
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
8.2
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
8.0
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
7.9
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
7.9
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
7.8
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
7.8
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
7.6
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
7.6
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
7.5
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
7.5
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
7.5
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
7.5
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
7.4
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
7.4
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
7.4
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
7.3
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
7.1
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
7.1
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
7.1
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
7.1
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
6.9
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
6.8
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
6.8
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
6.7
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
6.7
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
6.7
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
6.6
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
6.5
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
6.5
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
6.4
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
6.4
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
6.3
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
6.2
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
6.2
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
6.1
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
6.0
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
6.0
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
6.0
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
5.9
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
5.8
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
5.6
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
5.6
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
5.5
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
5.4
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
5.3
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
5.2
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
5.2
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
5.1
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
4.9
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
4.9
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
4.7
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
4.7
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
4.7
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
4.5
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
4.4
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
4.0
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
3.9
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
2.6
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
2.3
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS33A is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.3
Number of samples
207
Samples
Sample
Description
TPM
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
22.3
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
15.1
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
13.7
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
13.6
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
12.6
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
12.3
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
12.1
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
11.7
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
11.6
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
11.1
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
10.9
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
10.9
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
10.6
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
10.6
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
10.6
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
10.3
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
10.1
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
10.1
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
9.9
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
9.9
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
9.7
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
9.7
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
9.7
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
9.7
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
9.7
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
9.6
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
9.6
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
9.6
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
9.4
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
9.4
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
9.3
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
9.3
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
9.3
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
9.3
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
9.1
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
9.0
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
8.8
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
8.8
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
8.7
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
8.7
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
8.7
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
8.6
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
8.6
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
8.6
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
8.6
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
8.6
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
8.6
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
8.5
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
8.5
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
8.4
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
8.4
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
8.4
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
8.3
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
8.3
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
8.3
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
8.2
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
8.2
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
8.1
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
8.1
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
8.1
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
8.0
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
8.0
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
7.9
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
7.9
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
7.8
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
7.8
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
7.8
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
7.8
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
7.8
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
7.8
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
7.7
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
7.7
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
7.6
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
7.6
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
7.6
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
7.6
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
7.6
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
7.6
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
7.6
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
7.6
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
7.5
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
7.5
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
7.5
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
7.4
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
7.4
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
7.4
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
7.4
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
7.4
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
7.4
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
7.3
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
7.3
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
7.3
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
7.3
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
7.2
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
7.2
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
7.1
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
7.1
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
7.1
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
7.1
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
7.1
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
7.0
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
7.0
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
6.9
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
6.9
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
6.9
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
6.9
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
6.9
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
6.9
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
6.9
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
6.9
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
6.9
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
6.9
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
6.8
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
6.8
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
6.8
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
6.8
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
6.8
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
6.8
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
6.8
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
6.8
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
6.7
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
6.7
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
6.7
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
6.7
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
6.7
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
6.7
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
6.6
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
6.6
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
6.6
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
6.6
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
6.6
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
6.6
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
6.5
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
6.5
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
6.5
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
6.5
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
6.4
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
6.4
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
6.4
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
6.4
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
6.4
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
6.3
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
6.3
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
6.3
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
6.3
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
6.3
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
6.3
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
6.2
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
6.2
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
6.2
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
6.1
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
6.1
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
6.1
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
6.1
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
6.1
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
6.1
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
6.1
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
6.1
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
6.1
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
6.0
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
6.0
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
6.0
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
6.0
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
6.0
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
5.9
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
5.8
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
5.8
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
5.8
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
5.8
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
5.8
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
5.7
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
5.7
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
5.7
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
5.6
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
5.4
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
5.4
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
5.4
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
5.4
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
5.4
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
5.3
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
5.3
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
5.3
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
5.2
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
5.2
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
5.2
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
5.2
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
5.1
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
5.1
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
5.0
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
5.0
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
5.0
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
4.9
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
4.8
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
4.8
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
4.7
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
4.7
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
4.7
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
4.7
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
4.6
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
4.5
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
4.4
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
4.3
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
4.3
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
4.2
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
4.1
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
3.6
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
3.5
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
1f79fed9-f0d4-4c45-acd2-ea1441_D2
Normal
0.6
b2400046-1d25-429d-a821-6040a6
Tumor
0.5
02cde0c0-6840-495b-9b11-007d82_D2
Normal
0.4
3765c09a-fff7-4b37-bf2b-452b23_D2
Normal
0.4
fc9b09af-23b8-4ffe-b6c6-41236d_D2
Normal
0.4
5a3aa99d-ca10-45f6-939f-12392a_D2
Normal
0.4
7fd386f0-e7f6-4ee1-9cd7-b3318a_D2
Normal
0.4
1bf00d93-240f-47e8-8055-f546b0_D2
Normal
0.4
7cc7f69f-99f5-4b23-a9e0-ba0dc8_D8
Tumor
0.4
88c621d7-7fb3-4825-abbe-82ae4c_D2
Normal
0.3
46dfc1e4-0110-4d9f-888e-6a29ab_D2
Normal
0.3
2666323d-522f-4f0a-823c-ff8866_D2
Normal
0.3
63c1f7ac-b1ae-4c28-95aa-ce21e5_D2
Normal
0.3
154115ac-2ec2-439d-b55e-0464ee_D2
Normal
0.3
e1cd3d70-132b-452f-ba10-026721_D2
Tumor
0.3
0d5554d1-1653-4589-a44f-43113e_D2
Normal
0.3
359f5c81-2575-497e-8630-e4866f_D2
Normal
0.3
2f8b02e4-1848-4abc-a95e-dd9eb5_D3
Tumor
0.3
65867ab1-5eab-44a8-b2bb-d27263_D2
Normal
0.3
c8694e31-2c8f-4eb6-a7ef-a137d9_D3
Tumor
0.3
b6b41ba2-6415-41aa-b5f5-4d47db_D2
Normal
0.3
da747cee-5026-4923-af63-ad9f81_D2
Normal
0.3
c9f0f144-47f3-4d64-b29f-bcedfa_D2
Normal
0.3
8980bb9d-65c1-41cb-9f90-dddd5f_D2
Normal
0.3
f6173181-0993-4a5f-a4cd-5f30b1_D2
Tumor
0.2
b2978e90-cd2a-4665-b1bf-508a99_D2
Normal
0.2
16ac8458-5200-4302-9ad0-b311df_D2
Normal
0.2
9a6879b1-4f78-4ac6-9fca-dad049_D2
Normal
0.2
694e8df1-d9ee-473b-bec1-4f9237_D2
Normal
0.2
6e0d04fc-e6a8-41ed-b6f3-45537d_D2
Normal
0.2
efee6bb9-69dd-46c2-85b3-b55962_D2
Normal
0.2
4c9dcc8c-ccdc-4336-8e23-107feb_D2
Normal
0.2
d3078fa8-0692-411f-8441-0c7c48_D8
Tumor
0.2
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Tumor
0.2
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Normal
0.2
51590333-cfe5-4ce5-b8ff-58fa3c_D2
Normal
0.2
a27cf22d-836e-49a7-802f-47c1db_D2
Normal
0.2
7bdfa5c9-d11f-4600-9c44-a87996_D2
Normal
0.2
6b0a3188-d8ca-4d50-a377-a8fe4c_D2
Normal
0.2
76498650-fdbf-4f5d-a19a-cce9a2_D2
Normal
0.2
d0511ea6-43c3-4c61-b08e-cf49b7_D3
Tumor
0.2
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Normal
0.2
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Normal
0.2
04ded2cd-3b57-4aec-9c11-48f58e_D2
Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
8fab37a4-cdf9-4ce8-9081-7b9148_D2
Normal
0.2
71b2c1cc-0a31-4ca8-8beb-251e17_D2
Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
019cd0c0-733d-4b25-90e3-d54ce0_D2
Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
7478980a-60fb-4f5e-aa1c-2d7941_D2
Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
348f6009-e1be-44d2-a093-9ca844_D2
Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
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Tumor
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
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Tumor
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Tumor
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.3
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Tumor
-0.3
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Tumor
-0.3
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Tumor
-0.3
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Normal
-0.3
4cdeecb5-19fb-493c-91f5-eb0efc_D3
Tumor
-0.4
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Tumor
-0.4
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Tumor
-0.4
321fb3b2-ebb6-4ea5-b737-081264_D2
Tumor
-0.5
0f757044-9bc8-4ed4-90f3-e0a49a_D3
Tumor
-0.5
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.