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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.5 nTPM
HPA Brain:54.3 nTPM
GTEx:71.5 nTPM
FANTOM5:90.4 Scaled Tags Per Million
Pig:91.3 nTPM
Mouse:194.0 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039700
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 49.3
2481 Female, age 94, left hemisphere 71.5
1854 Male, age 80, left hemisphere 49.1
2290 Female, age 72, unknown 49.0
1857 Female, age 85, left hemisphere 48.9
2288 Male, age 75, left hemisphere 48.5
2846 Female, age 79, unknown 46.2
2289 Male, age 61, right hemisphere 40.9
1781 Male, age 74, unknown 40.1
Globus pallidus, externus
nTPM: 44.4
2772 Female, age 79, unknown 58.9
1996 Male, age 80, right hemisphere 56.9
2395 Male, age 75, both hemispheres 56.4
2646 Male, age 61, right hemisphere 30.1
2567 Female, age 72, unknown 19.9
Globus pallidus, internus
nTPM: 46.8
2778 Female, age 91, both hemispheres 58.1
2287 Male, age 75, right hemisphere 53.2
2483 Female, age 94, right hemisphere 52.7
2037 Male, age 80, right hemisphere 50.2
1818 Male, age 74, unknown 49.0
2111 Female, age 85, right hemisphere 39.4
2566 Female, age 72, unknown 25.4
Nucleus accumbens
nTPM: 49.7
2286 Male, age 75, left hemisphere 63.5
2391 Female, age 94, left hemisphere 63.5
1856 Female, age 91, right hemisphere 52.2
2698 Female, age 72, unknown 46.6
1806 Female, age 85, left hemisphere 45.4
2824 Male, age 61, right hemisphere 43.0
1783 Male, age 74, unknown 42.2
2732 Male, age 80, right hemisphere 40.8
Nucleus basalis of Meynert
nTPM: 40.5
2393 Male, age 80, right hemisphere 46.6
2821 Male, age 75, both hemispheres 44.7
2484 Female, age 94, left hemisphere 42.1
2569 Male, age 61, both hemispheres 28.7
Nucleus of the diagonal band
nTPM: 54.3
1812 Female, age 91, both hemispheres 72.9
2775 Male, age 80, right hemisphere 59.7
2195 Female, age 85, both hemispheres 52.5
2029 Male, age 61, right hemisphere 46.8
1979 Male, age 74, unknown 39.6
Putamen
nTPM: 42.5
2482 Female, age 94, left hemisphere 59.5
2466 Female, age 79, unknown 48.5
1937 Female, age 91, right hemisphere 47.6
1838 Male, age 80, right hemisphere 45.0
1829 Male, age 74, unknown 42.8
2647 Male, age 75, left hemisphere 27.8
2489 Female, age 72, unknown 26.2
Septal nuclei
nTPM: 50.8
2031 Female, age 72, unknown 67.9
2009 Female, age 91, both hemispheres 57.8
1960 Male, age 74, unknown 54.8
2629 Female, age 94, right hemisphere 53.3
2199 Male, age 80, right hemisphere 43.8
2059 Female, age 85, both hemispheres 41.2
2394 Male, age 61, left hemisphere 36.5
Stria terminalis, bed nucleus
nTPM: 44.3
1974 Female, age 91, both hemispheres 53.9
2486 Female, age 94, both hemispheres 44.5
2201 Male, age 74, unknown 34.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 71.5
Samples: 246

Max nTPM: 157.1
Min nTPM: 47.5
Std nTPM: 14.0
Median nTPM: 69.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 157.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 117.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 112.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 111.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 109.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 109.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 108.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 106.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 104.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 104.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 98.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 98.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 96.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 95.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 93.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 93.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 93.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 92.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 91.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 90.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 90.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 89.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 89.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 88.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 88.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 87.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 87.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 86.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 86.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 86.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 86.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 86.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 85.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 85.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 85.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 84.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 84.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 84.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 84.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 82.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 82.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 81.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 81.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 81.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 81.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 80.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 80.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 79.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 79.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 79.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 79.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 79.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 78.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 78.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 78.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 78.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 77.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 77.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 77.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 77.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 77.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 77.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 76.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 76.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 76.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 76.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 76.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 76.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 76.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 75.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 75.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 75.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 75.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 75.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 74.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 74.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 74.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 74.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 74.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 74.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 74.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 74.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 74.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 74.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 74.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 74.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 74.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 74.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 74.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 73.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 73.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 73.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 73.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 72.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 72.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 72.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 72.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 72.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 72.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 72.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 71.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 71.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 71.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 71.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 71.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 71.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 71.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 71.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 71.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 70.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 70.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 70.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 69.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 69.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 69.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 69.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 69.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 69.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 69.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 69.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 68.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 68.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 68.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 68.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 68.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 67.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 67.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 67.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 67.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 67.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 67.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 67.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 67.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 67.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 67.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 67.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 67.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 66.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 66.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 66.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 66.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 66.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 66.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 65.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 65.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 65.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 65.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 65.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 65.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 65.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 65.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 65.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 64.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 64.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 64.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 64.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 63.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 63.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 63.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 63.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 63.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 63.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 62.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 62.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 62.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 61.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 61.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 61.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 61.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 61.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 61.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 60.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 60.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 60.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 59.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 59.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 59.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 59.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 59.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 58.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 58.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 58.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 58.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 57.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 57.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 57.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 57.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 57.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 57.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 56.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 56.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 56.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 56.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 55.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 55.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 55.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 55.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 55.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 55.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 55.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 54.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 54.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 53.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 53.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 53.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 52.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 52.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 52.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 52.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 51.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 48.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 48.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 47.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 69.7
Samples: 246

Max nTPM: 126.1
Min nTPM: 49.7
Std nTPM: 11.6
Median nTPM: 67.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 126.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 124.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 114.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 99.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 98.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 96.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 95.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 93.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 91.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 91.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 91.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 88.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 88.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 88.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 87.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 86.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 86.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 86.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 85.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 84.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 84.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 84.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 83.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 83.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 83.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 83.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 83.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 83.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 83.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 82.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 82.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 82.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 81.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 81.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 81.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 81.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 81.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 81.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 81.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 81.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 81.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 80.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 80.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 80.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 79.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 79.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 79.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 79.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 78.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 78.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 78.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 77.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 77.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 77.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 77.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 76.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 76.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 76.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 75.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 75.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 75.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 75.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 75.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 75.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 75.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 75.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 75.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 74.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 74.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 74.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 74.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 74.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 73.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 73.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 73.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 73.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 73.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 73.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 73.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 73.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 73.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 73.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 73.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 73.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 72.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 72.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 72.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 72.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 72.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 72.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 72.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 72.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 72.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 71.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 71.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 71.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 71.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 70.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 70.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 70.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 70.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 70.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 70.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 69.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 69.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 69.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 69.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 69.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 69.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 69.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 69.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 68.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 68.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 68.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 68.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 68.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 68.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 67.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 67.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 67.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 67.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 67.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 67.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 67.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 67.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 67.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 67.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 67.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 67.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 67.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 67.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 67.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 67.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 67.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 66.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 66.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 66.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 66.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 66.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 66.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 66.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 66.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 66.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 66.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 66.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 65.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 65.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 65.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 65.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 65.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 65.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 65.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 65.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 65.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 65.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 65.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 64.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 64.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 64.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 64.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 64.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 64.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 64.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 64.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 63.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 63.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 63.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 63.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 63.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 62.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 62.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 62.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 62.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 62.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 62.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 62.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 62.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 62.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 62.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 62.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 62.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 61.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 61.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 61.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 61.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 61.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 61.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 61.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 61.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 60.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 60.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 60.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 60.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 60.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 60.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 59.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 59.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 59.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 59.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 59.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 59.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 59.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 59.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 59.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 59.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 59.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 58.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 58.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 58.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 58.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 58.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 58.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 58.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 57.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 57.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 56.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 56.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 56.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 56.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 56.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 55.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 55.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 55.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 55.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 55.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 54.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 54.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 54.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 54.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 54.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 53.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 53.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 53.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 52.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 52.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 50.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 50.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 50.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 49.7
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Brain - Putamen (basal ganglia)
Average nTPM: 68.3
Samples: 205

Max nTPM: 124.5
Min nTPM: 46.8
Std nTPM: 13.3
Median nTPM: 66.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 124.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 115.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 114.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 106.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 105.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 105.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 98.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 93.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 93.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 92.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 92.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 91.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 91.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 89.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 89.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 89.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 87.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 87.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 87.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 86.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 84.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 84.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 83.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 83.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 83.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 82.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 82.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 81.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 81.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 81.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 80.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 80.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 79.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 79.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 79.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 79.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 79.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 78.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 78.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 77.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 77.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 76.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 76.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 76.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 76.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 75.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 75.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 75.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 75.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 75.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 75.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 74.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 74.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 74.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 74.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 74.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 74.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 73.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 73.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 73.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 73.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 73.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 73.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 73.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 72.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 72.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 72.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 72.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 71.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 71.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 71.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 71.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 71.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 71.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 71.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 71.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 71.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 71.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 70.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 70.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 69.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 69.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 69.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 69.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 68.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 68.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 67.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 67.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 67.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 67.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 67.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 67.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 67.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 66.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 66.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 66.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 66.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 66.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 66.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 66.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 66.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 66.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 66.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 65.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 65.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 65.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 65.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 64.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 64.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 63.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 63.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 63.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 63.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 63.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 62.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 62.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 62.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 62.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 62.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 62.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 62.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 62.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 62.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 62.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 61.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 61.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 61.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 61.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 61.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 61.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 60.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 60.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 60.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 60.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 60.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 59.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 59.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 59.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 59.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 59.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 59.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 59.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 59.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 59.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 59.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 58.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 58.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 58.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 58.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 57.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 57.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 57.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 57.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 57.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 56.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 56.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 56.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 56.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 55.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 55.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 55.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 55.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 54.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 54.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 54.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 54.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 53.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 53.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 53.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 53.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 52.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 52.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 52.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 52.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 52.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 51.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 51.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 51.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 51.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 50.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 50.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 50.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 50.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 50.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 49.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 46.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

90.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 78.5
FF:10164-103B2 76 years, female 78.5
Nucleus accumbens
Scaled Tags Per Million: 90.4
FF:10037-101F1 23-56 years, mixed 90.4
Putamen
Scaled Tags Per Million: 80.0
FF:10176-103C5 60 years, female 80.0
Globus pallidus
Scaled Tags Per Million: 67.7
FF:10175-103C4 60 years, female 71.4
FF:10161-103A8 76 years, female 64.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.3
Pig sample Sample description nTPM
Caudate
nTPM: 75.3
Samples: 4

Max nTPM: 80.4
Min nTPM: 67.9
Sample A Female 75.2
Sample B Female 80.4
Sample C Male 77.5
Sample D Male 67.9
Putamen
nTPM: 88.2
Samples: 4

Max nTPM: 108.8
Min nTPM: 77.2
Sample A Female 84.3
Sample B Female 82.6
Sample C Male 108.8
Sample D Male 77.2
Septum
nTPM: 91.3
Samples: 4

Max nTPM: 100.7
Min nTPM: 74.2
Sample A Female 95.2
Sample B Female 95.0
Sample C Male 100.7
Sample D Male 74.2
Ventral pallidum
nTPM: 81.5
Samples: 4

Max nTPM: 101.5
Min nTPM: 66.3
Sample A Female 73.4
Sample B Female 101.5
Sample C Male 84.6
Sample D Male 66.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 194.0
Samples: 4

Max nTPM: 202.4
Min nTPM: 186.5
Sample A Male 188.9
Sample B Male 202.4
Sample C Female 186.5
Sample D Female 198.2
Septum
nTPM: 170.8
Samples: 4

Max nTPM: 188.9
Min nTPM: 162.7
Sample A Male 165.5
Sample B Male 188.9
Sample C Female 166.1
Sample D Female 162.7
Ventral forebrain
nTPM: 164.1
Samples: 4

Max nTPM: 188.2
Min nTPM: 152.1
Sample A Male 155.5
Sample B Male 160.4
Sample C Female 188.2
Sample D Female 152.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.9
69672144 Antisense, RP_050428_03_B03, Mouse strain C57BL/6J (56 days, male) 7.9
Pallidum
Expression energy: 6.9
69672144 Antisense, RP_050428_03_B03, Mouse strain C57BL/6J (56 days, male) 6.9

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