We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A5 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
358.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
338.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
273.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
271.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
265.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
249.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
241.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
240.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
239.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
239.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
216.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
214.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
210.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
188.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
187.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
184.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
179.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
179.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
174.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
171.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
170.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
170.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
170.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
169.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
168.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
167.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
167.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
164.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
157.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
153.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
152.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
152.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
151.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
144.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
139.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
134.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
131.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
131.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
130.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
129.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
129.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
128.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
127.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
123.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
121.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
120.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
118.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
118.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
117.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
116.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
115.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
113.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
113.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
113.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
110.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
110.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
109.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
108.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
107.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
107.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
105.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
104.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
103.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
103.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
103.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
103.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
101.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
101.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
100.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
100.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
96.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
92.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
92.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
91.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
91.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
91.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
90.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
89.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
89.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
88.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
88.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
87.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
87.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
86.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
84.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
84.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
83.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
82.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
81.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
80.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
80.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
79.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
78.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
78.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
77.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
77.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
76.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
75.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
75.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
74.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
74.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
73.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
72.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
72.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
71.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
71.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
71.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
71.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
71.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
70.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
69.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
69.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
69.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
69.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
69.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
68.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
67.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
66.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
66.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
65.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
65.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
64.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
62.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
61.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
61.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
61.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
60.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
59.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
59.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
58.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
58.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
58.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
57.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
57.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
56.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
56.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
55.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
55.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
55.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
54.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
53.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
52.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
52.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
51.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
51.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
51.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
50.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
49.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
49.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
48.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
48.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
46.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
45.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
44.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
44.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
44.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
43.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
42.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
41.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
40.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
40.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
40.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
39.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
39.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
39.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
39.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
39.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
38.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
37.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
37.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
36.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
36.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
36.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
35.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
35.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
35.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
34.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
34.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
33.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
33.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
32.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
32.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
32.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
31.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
31.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
29.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
28.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
28.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
28.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
28.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
27.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
27.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
26.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
26.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
26.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
25.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
24.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
24.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
24.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
24.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
24.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
23.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
23.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
23.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
23.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
22.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
22.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
22.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
21.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
21.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
20.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
20.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
20.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
20.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
19.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
19.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
19.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
18.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
18.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
18.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
17.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
16.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
16.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
16.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
16.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
16.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
15.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
15.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
15.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
15.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
15.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
15.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
15.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
14.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
14.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
14.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
13.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
12.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
11.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
10.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
10.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
10.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
9.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
9.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
9.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
4.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
3.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
3.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
2.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
2.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
0.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
0.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
0.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
0.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
0.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
0.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A5 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.7
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
294.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
280.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
260.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
227.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
207.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
200.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
171.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
168.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
167.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
163.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
157.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
152.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
152.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
151.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
142.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
136.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
129.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
123.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
121.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
120.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
120.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
117.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
117.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
115.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
113.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
112.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
109.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
106.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
102.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
99.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
97.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
93.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
89.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
89.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
87.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
86.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
86.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
84.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
84.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
83.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
81.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
79.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
77.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
77.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
76.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
74.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
74.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
72.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
71.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
71.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
70.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
68.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
67.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
67.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
66.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
65.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
64.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
63.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
62.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
61.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
60.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
59.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
58.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
58.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
57.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
57.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
57.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
56.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
55.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
54.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
54.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
53.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
53.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
51.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
48.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
48.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
46.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
46.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
46.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
46.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
45.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
45.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
45.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
45.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
45.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
44.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
44.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
44.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
44.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
43.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
43.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
42.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
41.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
41.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
41.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
40.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
39.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
39.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
38.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
37.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
37.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
36.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
36.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
36.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
34.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
34.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
32.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
32.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
31.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
31.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
31.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
30.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
30.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
30.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
29.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
29.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
29.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
29.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
28.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
28.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
28.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
28.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
26.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
26.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
26.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
26.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
25.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
24.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
22.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
22.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
22.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
21.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
21.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
20.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
20.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
20.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
19.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
19.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
18.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
18.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
18.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
17.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
17.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
16.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
14.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
11.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
9.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
7.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
6.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
6.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
5.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
4.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
4.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
3.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
3.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
3.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
3.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
2.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
2.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
2.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
2.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
2.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
2.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
1.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
1.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
1.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
1.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
0.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
0.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
0.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
0.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
0.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
0.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
0.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
921
Tumor
1.6
413
Tumor
1.3
618
Normal
1.1
136
Normal
1.0
824
Normal
1.0
365
Tumor
1.0
428
Normal
0.9
227
Tumor
0.9
868
Normal
0.9
877
Tumor
0.8
666
Normal
0.8
146
Normal
0.8
218
Normal
0.8
884
Normal
0.8
858
Normal
0.8
866
Normal
0.8
642
Normal
0.8
387
Tumor
0.8
258
Normal
0.8
132
Normal
0.8
664
Normal
0.8
636
Normal
0.8
162
Normal
0.8
952
Normal
0.8
938
Normal
0.8
951
Tumor
0.7
648
Normal
0.7
641
Tumor
0.7
628
Normal
0.7
1046
Normal
0.7
414
Normal
0.7
464
Normal
0.7
982
Normal
0.7
222
Normal
0.7
138
Normal
0.7
394
Normal
0.7
714
Normal
0.7
456
Normal
0.7
436
Normal
0.7
286
Normal
0.7
922
Normal
0.7
882
Normal
0.7
926
Normal
0.6
568
Normal
0.6
786
Normal
0.6
1042
Normal
0.6
148
Normal
0.6
715
Tumor
0.6
818
Normal
0.6
874
Normal
0.6
376
Normal
0.6
738
Normal
0.6
912
Normal
0.6
686
Normal
0.6
452
Normal
0.6
196
Normal
0.6
358
Normal
0.6
964
Normal
0.6
944
Normal
0.5
967
Tumor
0.5
1016
Normal
0.5
396
Normal
0.5
864
Normal
0.5
878
Normal
0.5
816
Normal
0.5
362
Normal
0.5
426
Normal
0.5
388
Normal
0.5
756
Normal
0.5
918
Normal
0.5
662
Normal
0.5
188
Normal
0.5
386
Normal
0.5
214
Normal
0.5
111
Normal
0.5
314
Normal
0.5
958
Normal
0.4
1025
Tumor
0.4
472
Normal
0.4
232
Normal
0.4
341
Tumor
0.4
968
Normal
0.4
351
Tumor
0.4
221
Tumor
0.4
956
Normal
0.4
344
Normal
0.4
424
Normal
0.4
914
Normal
0.4
716
Normal
0.4
366
Normal
0.4
432
Normal
0.4
518
Normal
0.4
298
Normal
0.4
261
Tumor
0.4
484
Normal
0.4
528
Normal
0.4
285
Tumor
0.4
966
Normal
0.4
385
Tumor
0.4
742
Normal
0.4
262
Normal
0.4
482
Normal
0.4
1031
Tumor
0.4
267
Tumor
0.4
564
Normal
0.3
696
Normal
0.3
212
Normal
0.3
746
Normal
0.3
975
Tumor
0.3
352
Normal
0.3
342
Normal
0.3
728
Normal
0.3
363
Tumor
0.3
186
Normal
0.3
617
Tumor
0.3
332
Normal
0.3
272
Normal
0.3
161
Tumor
0.3
851
Tumor
0.3
572
Normal
0.3
488
Normal
0.3
954
Normal
0.3
976
Normal
0.3
1014
Normal
0.3
271
Tumor
0.3
852
Normal
0.3
422
Normal
0.3
468
Normal
0.3
698
Normal
0.3
526
Normal
0.3
778
Normal
0.3
574
Normal
0.2
127
Tumor
0.2
142
Normal
0.2
924
Normal
0.2
462
Normal
0.2
1022
Normal
0.2
356
Normal
0.2
1045
Tumor
0.2
446
Normal
0.2
448
Normal
0.2
416
Normal
0.2
713
Tumor
0.2
463
Tumor
0.2
393
Tumor
0.2
627
Tumor
0.2
123
Tumor
0.2
514
Normal
0.2
984
Normal
0.2
466
Normal
0.2
862
Normal
0.2
217
Tumor
0.2
672
Normal
0.2
114
Normal
0.2
534
Normal
0.2
353
Tumor
0.1
391
Tumor
0.1
1032
Normal
0.1
513
Tumor
0.1
228
Normal
0.1
423
Tumor
0.1
554
Normal
0.1
494
Normal
0.1
616
Normal
0.1
744
Normal
0.1
368
Normal
0.1
965
Tumor
0.1
231
Tumor
0.1
268
Normal
0.1
312
Normal
0.1
354
Normal
0.1
1026
Normal
0.1
384
Normal
0.1
978
Normal
0.1
722
Normal
0.1
535
Tumor
0.1
743
Tumor
0.1
172
Normal
0.1
785
Tumor
0.1
328
Normal
0.0
392
Normal
0.0
723
Tumor
0.0
361
Tumor
0.0
128
Normal
0.0
558
Normal
0.0
124
Normal
0.0
278
Normal
0.0
863
Tumor
0.0
817
Tumor
0.0
916
Normal
0.0
192
Normal
0.0
546
Normal
0.0
955
Tumor
0.0
131
Tumor
0.0
145
Tumor
0.0
1028
Normal
-0.1
434
Normal
-0.1
224
Normal
-0.1
412
Normal
-0.1
1044
Normal
-0.1
364
Normal
-0.1
671
Tumor
-0.1
498
Normal
-0.1
474
Normal
-0.1
881
Tumor
-0.1
481
Tumor
-0.1
126
Normal
-0.2
911
Tumor
-0.2
137
Tumor
-0.2
553
Tumor
-0.2
536
Normal
-0.2
367
Tumor
-0.2
727
Tumor
-0.2
147
Tumor
-0.2
937
Tumor
-0.2
517
Tumor
-0.2
435
Tumor
-0.2
395
Tumor
-0.2
571
Tumor
-0.2
331
Tumor
-0.2
721
Tumor
-0.3
113
Tumor
-0.3
913
Tumor
-0.3
883
Tumor
-0.3
741
Tumor
-0.3
277
Tumor
-0.3
983
Tumor
-0.3
1043
Tumor
-0.3
981
Tumor
-0.3
223
Tumor
-0.3
516
Normal
-0.3
451
Tumor
-0.3
141
Tumor
-0.4
492
Normal
-0.4
857
Tumor
-0.4
695
Tumor
-0.4
327
Tumor
-0.4
1013
Tumor
-0.4
665
Tumor
-0.4
284
Normal
-0.4
195
Tumor
-0.4
171
Tumor
-0.4
563
Tumor
-0.4
467
Tumor
-0.4
297
Tumor
-0.4
444
Normal
-0.5
447
Tumor
-0.5
415
Tumor
-0.5
737
Tumor
-0.5
433
Tumor
-0.5
471
Tumor
-0.5
478
Normal
-0.5
567
Tumor
-0.5
538
Normal
-0.5
185
Tumor
-0.5
814
Normal
-0.5
1015
Tumor
-0.5
963
Tumor
-0.6
957
Tumor
-0.6
873
Tumor
-0.6
557
Tumor
-0.6
661
Tumor
-0.6
917
Tumor
-0.6
977
Tumor
-0.6
524
Normal
-0.6
411
Tumor
-0.6
313
Tumor
-0.6
455
Tumor
-0.6
465
Tumor
-0.6
615
Tumor
-0.6
1041
Tumor
-0.6
311
Tumor
-0.7
257
Tumor
-0.7
187
Tumor
-0.7
421
Tumor
-0.7
461
Tumor
-0.7
357
Tumor
-0.7
635
Tumor
-0.7
473
Tumor
-0.7
943
Tumor
-0.8
431
Tumor
-0.8
823
Tumor
-0.8
487
Tumor
-0.8
191
Tumor
-0.8
685
Tumor
-0.8
343
Tumor
-0.8
112
Tumor
-0.8
745
Tumor
-0.9
213
Tumor
-0.9
355
Tumor
-0.9
755
Tumor
-0.9
697
Tumor
-0.9
1021
Tumor
-0.9
375
Tumor
-0.9
815
Tumor
-0.9
491
Tumor
-0.9
867
Tumor
-0.9
483
Tumor
-1.0
813
Tumor
-1.0
537
Tumor
-1.0
777
Tumor
-1.0
1027
Tumor
-1.0
425
Tumor
-1.0
493
Tumor
-1.0
383
Tumor
-1.0
515
Tumor
-1.0
923
Tumor
-1.1
497
Tumor
-1.1
443
Tumor
-1.1
445
Tumor
-1.1
477
Tumor
-1.1
953
Tumor
-1.1
573
Tumor
-1.1
427
Tumor
-1.1
915
Tumor
-1.2
525
Tumor
-1.2
125
Tumor
-1.2
545
Tumor
-1.2
724
Normal
-1.2
527
Tumor
-1.3
925
Tumor
-1.3
663
Tumor
-1.3
861
Tumor
-1.3
647
Tumor
-1.4
135
Tumor
-1.4
283
Tumor
-1.4
533
Tumor
-1.5
865
Tumor
-1.5
523
Tumor
-1.6
211
Tumor
-1.6
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.