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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.1
nTPM
HPA Brain:
56.9
nTPM
GTEx:
11.1
nTPM
FANTOM5:
59.4
Scaled Tags Per Million
Pig:
28.9
nTPM
SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
56.9
Sample id
Sample description
nTPM
Cervical spinal cord, central gray nTPM: 49.2
2565
Male, age 75, midline
54.3
2194
Female, age 79, both hemispheres
53.8
1981
Female, age 72, midline
50.6
2816
Male, age 47, midline
45.5
2048
Male, age 55, midline
41.8
Cervical spinal cord, dorsal horn nTPM: 56.9
2297
Male, age 75, both hemispheres
67.2
2296
Male, age 66, both hemispheres
61.8
2069
Male, age 47, both hemispheres
61.1
2173
Female, age 72, unknown
57.3
1877
Male, age 55, unknown
48.4
2721
Male, age 90, both hemispheres
45.4
Cervical spinal cord, ventral horn nTPM: 51.3
2068
Male, age 55, unknown
55.4
2098
Female, age 72, unknown
55.2
2820
Female, age 79, both hemispheres
52.0
2809
Male, age 90, both hemispheres
49.6
2295
Male, age 66, both hemispheres
49.5
2480
Male, age 75, both hemispheres
46.1
SPINAL CORD - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.1
GTEx sample id
Sample description
nTPM
Brain - Spinal cord (cervical c-1) Average nTPM: 11.1
Samples: 159
Max nTPM: 16.8
Min nTPM: 5.7
Std nTPM: 2.0
Median nTPM: 11.1
GTEX-1CAV2-0011-R9b-SM-9WG5M
40-49 years, female
16.8
GTEX-15DDE-0011-R9b-SM-6M46U
50-59 years, female
16.5
GTEX-WL46-0011-R9A-SM-3MJFP
50-59 years, male
16.5
GTEX-12126-0011-R9b-SM-5BC6P
20-29 years, male
16.2
GTEX-11WQK-0011-R9b-SM-5BC6N
50-59 years, male
15.4
GTEX-14BIM-0011-R9a-SM-6LLJL
60-69 years, female
15.4
GTEX-QVJO-0011-R9A-SM-2S1QH
60-69 years, female
15.3
GTEX-11ZUS-0011-R9b-SM-5BC76
30-39 years, male
15.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z
40-49 years, male
15.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8
50-59 years, male
14.7
GTEX-1F88F-0011-R9b-SM-9WG7L
60-69 years, female
14.3
GTEX-139UW-0011-R9b-SM-5LZYT
60-69 years, male
14.2
GTEX-13PLJ-0011-R9b-SM-5O9DV
60-69 years, female
14.2
GTEX-1KANB-0011-R9b-SM-EZ6MO
50-59 years, male
14.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY
60-69 years, male
14.2
GTEX-1C6VS-0011-R9b-SM-9WG5W
60-69 years, male
14.1
GTEX-16XZZ-0011-R9b-SM-7DHKX
60-69 years, male
14.0
GTEX-15DYW-0011-R9b-SM-6PALB
60-69 years, female
13.4
GTEX-15EO6-0011-R9a-SM-6PALG
50-59 years, male
13.3
GTEX-1JMLX-0011-R9a-SM-EYYXM
50-59 years, male
13.3
GTEX-PWO3-0011-R9A-SM-EVR2V
60-69 years, female
13.2
GTEX-OXRO-0011-R9A-SM-3NB1X
60-69 years, female
13.1
GTEX-YFC4-0011-R9a-SM-4SOK4
40-49 years, female
13.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A
40-49 years, male
13.1
GTEX-1GZHY-0011-R9a-SM-9WG5R
50-59 years, female
13.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3
60-69 years, male
13.1
GTEX-13SLX-0011-R9b-SM-5SI6X
50-59 years, female
13.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF
60-69 years, female
13.0
GTEX-1LSNL-0011-R9b-SM-EYYWK
50-59 years, male
13.0
GTEX-13N1W-0011-R9b-SM-5MR4R
70-79 years, male
12.9
GTEX-ZE9C-0011-R9a-SM-4WWCY
60-69 years, male
12.8
GTEX-1GF9W-0011-R9b-SM-9WG7J
60-69 years, male
12.8
GTEX-12WSD-0011-R9a-SM-5GU6W
60-69 years, female
12.6
GTEX-13FLV-0011-R9b-SM-5L3DA
50-59 years, male
12.6
GTEX-14BIN-0011-R9a-SM-5SI76
50-59 years, female
12.6
GTEX-13OVL-0011-R9a-SM-5P9GX
50-59 years, male
12.5
GTEX-13NYS-0011-R9b-SM-5MR44
60-69 years, male
12.4
GTEX-1F52S-0011-R9a-SM-9WG62
60-69 years, female
12.4
GTEX-14PN4-0011-R9a-SM-6LLH9
50-59 years, male
12.3
GTEX-1I1GS-0011-R9b-SM-CMKHF
60-69 years, male
12.3
GTEX-13SLW-0011-R9a-SM-5O9BT
70-79 years, male
12.2
GTEX-147GR-0011-R9a-SM-5S2UY
60-69 years, male
12.2
GTEX-18464-0011-R9a-SM-731BK
50-59 years, male
12.2
GTEX-XMD1-0011-R9A-SM-4AT49
60-69 years, male
12.2
GTEX-1B8L1-0011-R9b-SM-9WG5U
60-69 years, male
12.2
GTEX-17EVQ-0011-R9b-SM-79OJY
70-79 years, male
12.1
GTEX-13NYB-0011-R9b-SM-5MR5P
40-49 years, male
11.9
GTEX-13PVQ-0011-R9b-SM-5LU3B
50-59 years, male
11.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY
60-69 years, male
11.8
GTEX-1GTWX-0011-R9a-SM-ADEH4
60-69 years, male
11.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO
70-79 years, male
11.8
GTEX-145LU-0011-R9b-SM-5SI66
50-59 years, male
11.7
GTEX-OHPN-0011-R9A-SM-5TDEJ
60-69 years, female
11.7
GTEX-13FTY-0011-R9b-SM-5KM2U
40-49 years, female
11.6
GTEX-13JUV-0011-R9a-SM-5LZX3
40-49 years, female
11.6
GTEX-12WSH-0011-R9b-SM-5LZUG
50-59 years, male
11.5
GTEX-14PJM-0011-R9b-SM-6EU35
50-59 years, female
11.5
GTEX-R55E-0011-R9A-SM-2TC6C
20-29 years, male
11.5
GTEX-1EH9U-0011-R9b-SM-9WG5T
60-69 years, male
11.5
GTEX-1GN73-0011-R9a-SM-CKZO5
60-69 years, male
11.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP
50-59 years, male
11.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1
50-59 years, female
11.5
GTEX-11GSP-0011-R9b-SM-5NQ77
60-69 years, female
11.4
GTEX-13VXU-0011-R9b-SM-5SI73
50-59 years, male
11.4
GTEX-ZAB4-0011-R9a-SM-4SOKG
40-49 years, male
11.4
GTEX-139T4-0011-R9b-SM-5HL6S
50-59 years, female
11.3
GTEX-148VJ-0011-R9b-SM-5SI77
70-79 years, male
11.3
GTEX-14ABY-0011-R9a-SM-5PNZK
50-59 years, male
11.3
GTEX-14BMV-0011-R9b-SM-5ZZUA
50-59 years, male
11.3
GTEX-TSE9-0011-R9A-SM-3DB7Q
60-69 years, female
11.3
GTEX-1IY9M-0011-R9b-SM-D3L8J
60-69 years, male
11.3
GTEX-12WSC-0011-R9a-SM-5GU4U
50-59 years, male
11.2
GTEX-13S7M-0011-R9a-SM-5O9DW
60-69 years, female
11.2
GTEX-14E6C-0011-R9a-SM-6EU33
40-49 years, male
11.2
GTEX-15CHQ-0011-R9a-SM-6LLHX
60-69 years, male
11.2
GTEX-11UD2-0011-R9b-SM-DO926
50-59 years, male
11.2
GTEX-1H1DG-0011-R9b-SM-ACKVB
70-79 years, male
11.2
GTEX-1H23P-0011-R9a-SM-CM2T1
60-69 years, male
11.2
GTEX-13NZA-0011-R9b-SM-5MR5I
60-69 years, male
11.1
GTEX-13OVJ-0011-R9b-SM-5L3GD
50-59 years, female
11.1
GTEX-14JIY-0011-R9a-SM-6EU34
60-69 years, male
11.1
GTEX-16NPV-0011-R9b-SM-79ONF
50-59 years, female
11.1
GTEX-16Z82-0011-R9a-SM-7DUFA
60-69 years, male
11.1
GTEX-1HBPH-0011-R9a-SM-CMKH3
40-49 years, female
11.1
GTEX-13CZV-0011-R9a-SM-5LZXT
60-69 years, male
11.0
GTEX-ZF28-0011-R9a-SM-4WWDY
60-69 years, male
11.0
GTEX-1LVA9-0011-R9a-SM-EYYWF
50-59 years, male
11.0
GTEX-1A8G7-0011-R9b-SM-7IGQH
60-69 years, male
10.9
GTEX-1HFI6-0011-R9b-SM-CMKH4
40-49 years, male
10.9
GTEX-13OW5-0011-R9b-SM-5O9CL
60-69 years, male
10.8
GTEX-13QJC-0011-R9b-SM-5PNX3
60-69 years, female
10.8
GTEX-11ONC-0011-R9b-SM-5NQ8J
60-69 years, male
10.7
GTEX-T6MN-0011-R9A-SM-32QOZ
50-59 years, male
10.7
GTEX-11ZVC-0011-R9a-SM-57WC5
50-59 years, female
10.6
GTEX-13FXS-0011-R9a-SM-5K7UI
50-59 years, male
10.6
GTEX-14BIL-0011-R9a-SM-5SI7A
50-59 years, male
10.6
GTEX-YJ89-0011-R9a-SM-4SOK7
60-69 years, male
10.6
GTEX-ZVZQ-0011-R9a-SM-51MRH
60-69 years, female
10.6
GTEX-1C6VQ-0011-R9a-SM-7SB85
50-59 years, male
10.5
GTEX-1B933-0011-R9a-SM-79OOR
50-59 years, female
10.4
GTEX-T5JC-0011-R9A-SM-32PLV
20-29 years, male
10.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ
50-59 years, male
10.4
GTEX-14E7W-0011-R9a-SM-62LE6
70-79 years, male
10.3
GTEX-14PJO-0011-R9b-SM-62LE9
60-69 years, male
10.3
GTEX-1EU9M-0011-R9a-SM-9WG61
60-69 years, male
10.3
GTEX-QVUS-0011-R9A-SM-3GIJA
60-69 years, female
10.2
GTEX-131XW-0011-R9a-SM-5N9EO
50-59 years, female
10.1
GTEX-131YS-0011-R9b-SM-5EQLY
60-69 years, female
10.1
GTEX-13X6I-0011-R9b-SM-5PNZJ
60-69 years, male
10.1
GTEX-1GF9V-0011-R9a-SM-CL53K
60-69 years, male
10.1
GTEX-1GN2E-0011-R9b-SM-9WG7F
60-69 years, male
10.1
GTEX-1H1DF-0011-R9b-SM-CM2RN
40-49 years, female
10.0
GTEX-1I19N-0011-R9a-SM-CMKHN
70-79 years, male
9.9
GTEX-1J8EW-0011-R9b-SM-D4P2F
60-69 years, female
9.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR
60-69 years, female
9.9
GTEX-13O1R-0011-R9b-SM-5KM33
60-69 years, male
9.8
GTEX-13PL6-0011-R9b-SM-5O9CH
40-49 years, female
9.8
GTEX-RNOR-0011-R9A-SM-2TF52
50-59 years, female
9.8
GTEX-1R46S-0011-R9a-SM-EZ6N7
60-69 years, female
9.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ
60-69 years, male
9.7
GTEX-1IGQW-0011-R9b-SM-D4P25
60-69 years, male
9.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK
40-49 years, female
9.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP
60-69 years, male
9.7
GTEX-NPJ7-0011-R9a-SM-2TC5R
60-69 years, female
9.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ
70-79 years, male
9.5
GTEX-NL4W-0011-R9a-SM-2I3G1
50-59 years, male
9.5
GTEX-NPJ8-0011-R9a-SM-2YUN5
40-49 years, male
9.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI
60-69 years, male
9.5
GTEX-1F6I4-0011-R9a-SM-CMKFU
60-69 years, male
9.4
GTEX-1H2FU-0011-R9b-SM-CE6S4
60-69 years, female
9.4
GTEX-13N2G-0011-R9b-SM-5MR4E
60-69 years, male
9.3
GTEX-11DZ1-0011-R9a-SM-DO933
50-59 years, male
9.3
GTEX-1I1CD-0011-R9a-SM-CMKHB
60-69 years, female
9.3
GTEX-RU72-0011-R9A-SM-2TF67
50-59 years, female
9.2
GTEX-11ZTS-0011-R9b-SM-DO93Q
60-69 years, female
9.2
GTEX-1GN1U-0011-R9b-SM-CMKFW
50-59 years, female
9.2
GTEX-1HSMO-0011-R9b-SM-CM2T2
60-69 years, male
9.2
GTEX-15G19-0011-R9b-SM-7KUEE
60-69 years, male
9.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6
40-49 years, female
9.0
GTEX-1IDJH-0011-R9a-SM-ADEIN
70-79 years, male
9.0
GTEX-15DCD-0011-R9b-SM-7KUED
70-79 years, female
8.9
GTEX-15ER7-0011-R9b-SM-6PALF
20-29 years, female
8.8
GTEX-XLM4-0011-R9A-SM-4AT45
60-69 years, male
8.8
GTEX-1A32A-0011-R9b-SM-7MGXD
50-59 years, female
8.7
GTEX-11EMC-0011-R9b-SM-DO921
60-69 years, female
8.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E
60-69 years, male
8.6
GTEX-QDT8-0011-R9A-SM-CYPRD
30-39 years, female
8.6
GTEX-13CIG-0011-R9a-SM-5K7VU
50-59 years, male
8.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L
70-79 years, female
8.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7
60-69 years, male
8.0
GTEX-1HGF4-0011-R9a-SM-ADEH9
60-69 years, male
7.7
GTEX-1I1HK-0011-R9a-SM-CMKHK
60-69 years, male
7.7
GTEX-1HBPM-0011-R9b-SM-ARL7C
60-69 years, female
7.5
GTEX-1192X-0011-R9b-SM-DO934
50-59 years, male
6.9
GTEX-1CB4H-0011-R9a-SM-CKZNL
60-69 years, female
6.9
GTEX-1I1GV-0011-R9b-SM-ARZLE
60-69 years, male
6.8
GTEX-1EKGG-0011-R9a-SM-CMKFV
60-69 years, male
6.7
GTEX-1HBPI-0011-R9b-SM-ARL76
50-59 years, male
6.7
GTEX-1HR98-0011-R9b-SM-ARL79
60-69 years, male
5.7
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SPINAL CORD - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
