We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIF21A is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
39.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
31.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
27.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
26.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
23.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
22.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
22.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
22.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
21.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
21.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
21.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
20.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
20.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
20.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
20.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
20.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
18.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
17.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
17.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
17.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
16.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
16.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
16.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
16.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
16.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
15.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
15.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
15.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
14.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
14.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
13.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
13.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
13.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
13.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
13.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
13.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
12.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
12.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
12.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
11.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
11.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
10.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
10.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
10.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
9.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
9.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
9.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
8.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
8.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
8.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
8.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
7.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
7.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
6.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
6.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
6.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
5.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
5.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
4.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
4.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
4.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIF21A is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.7
Number of samples
231
Samples
Sample
Description
TPM
DO23542
0 years, male, NA, stage:3, alive, 960 days
28.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
27.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
16.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
16.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
15.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
14.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
14.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
13.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
13.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
13.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
11.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
8.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
8.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
8.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
8.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
7.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
7.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
7.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
6.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
6.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
6.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
5.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
5.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
5.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
5.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
5.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
5.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
4.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
4.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
4.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
4.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
4.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
4.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
4.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
4.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
4.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
4.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
4.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
4.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
4.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
3.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
3.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
3.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
3.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
2.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
2.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
2.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
2.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
737
Tumor
1.0
1013
Tumor
1.0
533
Tumor
0.9
497
Tumor
0.8
445
Tumor
0.8
331
Tumor
0.8
285
Tumor
0.8
473
Tumor
0.8
1041
Tumor
0.8
351
Tumor
0.8
221
Tumor
0.8
443
Tumor
0.8
647
Tumor
0.7
921
Tumor
0.7
147
Tumor
0.7
525
Tumor
0.7
463
Tumor
0.7
665
Tumor
0.7
951
Tumor
0.6
715
Tumor
0.6
527
Tumor
0.6
367
Tumor
0.6
515
Tumor
0.6
865
Tumor
0.6
545
Tumor
0.6
851
Tumor
0.6
523
Tumor
0.6
671
Tumor
0.6
635
Tumor
0.6
231
Tumor
0.5
815
Tumor
0.5
277
Tumor
0.5
697
Tumor
0.5
983
Tumor
0.5
557
Tumor
0.5
487
Tumor
0.5
131
Tumor
0.5
425
Tumor
0.5
123
Tumor
0.5
297
Tumor
0.5
727
Tumor
0.5
137
Tumor
0.5
663
Tumor
0.4
915
Tumor
0.4
573
Tumor
0.4
685
Tumor
0.4
267
Tumor
0.4
925
Tumor
0.4
967
Tumor
0.4
411
Tumor
0.4
743
Tumor
0.4
911
Tumor
0.3
755
Tumor
0.3
261
Tumor
0.3
661
Tumor
0.3
217
Tumor
0.3
447
Tumor
0.3
863
Tumor
0.3
955
Tumor
0.3
223
Tumor
0.3
455
Tumor
0.3
127
Tumor
0.3
923
Tumor
0.3
977
Tumor
0.3
413
Tumor
0.3
881
Tumor
0.3
745
Tumor
0.3
813
Tumor
0.3
627
Tumor
0.3
567
Tumor
0.3
641
Tumor
0.3
965
Tumor
0.2
271
Tumor
0.2
1043
Tumor
0.2
187
Tumor
0.2
937
Tumor
0.2
777
Tumor
0.2
385
Tumor
0.2
421
Tumor
0.2
513
Tumor
0.2
535
Tumor
0.2
537
Tumor
0.2
141
Tumor
0.2
943
Tumor
0.2
387
Tumor
0.2
724
Normal
0.2
483
Tumor
0.2
1021
Tumor
0.2
471
Tumor
0.2
341
Tumor
0.2
963
Tumor
0.2
353
Tumor
0.2
493
Tumor
0.2
451
Tumor
0.1
695
Tumor
0.1
873
Tumor
0.1
817
Tumor
0.1
395
Tumor
0.1
135
Tumor
0.1
1025
Tumor
0.1
191
Tumor
0.1
435
Tumor
0.1
648
Normal
0.1
481
Tumor
0.1
563
Tumor
0.1
213
Tumor
0.1
427
Tumor
0.0
814
Normal
0.0
861
Tumor
0.0
461
Tumor
0.0
571
Tumor
0.0
975
Tumor
0.0
327
Tumor
0.0
1016
Normal
0.0
666
Normal
0.0
477
Tumor
0.0
926
Normal
0.0
171
Tumor
0.0
968
Normal
0.0
474
Normal
0.0
866
Normal
0.0
528
Normal
0.0
877
Tumor
0.0
431
Tumor
0.0
465
Tumor
0.0
1046
Normal
0.0
534
Normal
0.0
536
Normal
0.0
723
Tumor
0.0
136
Normal
0.0
672
Normal
0.0
696
Normal
0.0
785
Tumor
0.0
313
Tumor
0.0
554
Normal
0.0
484
Normal
0.0
467
Tumor
0.0
355
Tumor
0.0
423
Tumor
-0.1
744
Normal
-0.1
698
Normal
-0.1
1028
Normal
-0.1
558
Normal
-0.1
721
Tumor
-0.1
664
Normal
-0.1
218
Normal
-0.1
957
Tumor
-0.1
391
Tumor
-0.1
148
Normal
-0.1
393
Tumor
-0.1
132
Normal
-0.1
422
Normal
-0.1
918
Normal
-0.1
982
Normal
-0.1
138
Normal
-0.1
195
Tumor
-0.1
944
Normal
-0.1
126
Normal
-0.1
913
Tumor
-0.1
472
Normal
-0.1
161
Tumor
-0.1
916
Normal
-0.1
976
Normal
-0.1
518
Normal
-0.1
864
Normal
-0.1
172
Normal
-0.1
742
Normal
-0.1
738
Normal
-0.1
448
Normal
-0.1
1045
Tumor
-0.1
728
Normal
-0.1
436
Normal
-0.1
162
Normal
-0.1
124
Normal
-0.1
662
Normal
-0.1
516
Normal
-0.1
392
Normal
-0.1
713
Tumor
-0.1
956
Normal
-0.1
922
Normal
-0.1
868
Normal
-0.1
283
Tumor
-0.1
514
Normal
-0.1
722
Normal
-0.1
553
Tumor
-0.1
464
Normal
-0.1
114
Normal
-0.1
498
Normal
-0.1
298
Normal
-0.1
113
Tumor
-0.1
616
Normal
-0.1
952
Normal
-0.1
278
Normal
-0.1
311
Tumor
-0.1
917
Tumor
-0.1
258
Normal
-0.1
526
Normal
-0.1
433
Tumor
-0.1
628
Normal
-0.1
128
Normal
-0.1
416
Normal
-0.1
284
Normal
-0.1
146
Normal
-0.1
365
Tumor
-0.1
232
Normal
-0.1
111
Normal
-0.1
192
Normal
-0.1
572
Normal
-0.1
568
Normal
-0.1
428
Normal
-0.1
862
Normal
-0.1
1022
Normal
-0.1
414
Normal
-0.1
714
Normal
-0.1
268
Normal
-0.1
564
Normal
-0.1
823
Tumor
-0.1
884
Normal
-0.1
984
Normal
-0.2
756
Normal
-0.2
1027
Tumor
-0.2
212
Normal
-0.2
312
Normal
-0.2
1044
Normal
-0.2
424
Normal
-0.2
546
Normal
-0.2
145
Tumor
-0.2
227
Tumor
-0.2
1031
Tumor
-0.2
357
Tumor
-0.2
257
Tumor
-0.2
434
Normal
-0.2
224
Normal
-0.2
524
Normal
-0.2
142
Normal
-0.2
978
Normal
-0.2
488
Normal
-0.2
938
Normal
-0.2
1026
Normal
-0.2
964
Normal
-0.2
574
Normal
-0.2
363
Tumor
-0.2
1014
Normal
-0.2
386
Normal
-0.2
376
Normal
-0.2
412
Normal
-0.2
356
Normal
-0.2
125
Tumor
-0.2
618
Normal
-0.2
462
Normal
-0.2
214
Normal
-0.2
824
Normal
-0.2
816
Normal
-0.2
426
Normal
-0.2
914
Normal
-0.2
396
Normal
-0.2
491
Tumor
-0.2
642
Normal
-0.2
492
Normal
-0.2
286
Normal
-0.2
958
Normal
-0.2
196
Normal
-0.2
778
Normal
-0.2
446
Normal
-0.2
617
Tumor
-0.2
188
Normal
-0.2
262
Normal
-0.2
328
Normal
-0.2
874
Normal
-0.2
482
Normal
-0.2
878
Normal
-0.2
314
Normal
-0.2
953
Tumor
-0.2
716
Normal
-0.2
456
Normal
-0.2
272
Normal
-0.2
444
Normal
-0.2
228
Normal
-0.2
375
Tumor
-0.2
912
Normal
-0.2
818
Normal
-0.2
1042
Normal
-0.2
352
Normal
-0.2
362
Normal
-0.2
1015
Tumor
-0.2
538
Normal
-0.2
364
Normal
-0.2
332
Normal
-0.2
852
Normal
-0.2
924
Normal
-0.2
494
Normal
-0.2
786
Normal
-0.2
746
Normal
-0.2
432
Normal
-0.2
466
Normal
-0.2
222
Normal
-0.3
615
Tumor
-0.3
1032
Normal
-0.3
954
Normal
-0.3
415
Tumor
-0.3
478
Normal
-0.3
384
Normal
-0.3
358
Normal
-0.3
966
Normal
-0.3
186
Normal
-0.3
741
Tumor
-0.3
858
Normal
-0.3
394
Normal
-0.3
867
Tumor
-0.3
361
Tumor
-0.3
354
Normal
-0.3
686
Normal
-0.3
388
Normal
-0.3
452
Normal
-0.3
857
Tumor
-0.3
368
Normal
-0.3
517
Tumor
-0.3
468
Normal
-0.3
636
Normal
-0.3
342
Normal
-0.3
344
Normal
-0.4
882
Normal
-0.4
185
Tumor
-0.4
211
Tumor
-0.4
883
Tumor
-0.4
112
Tumor
-0.4
383
Tumor
-0.4
366
Normal
-0.5
981
Tumor
-0.6
343
Tumor
-0.8
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
