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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A8 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
20.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
7.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
6.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
4.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
4.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
4.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
3.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
2.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
2.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A8 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
112.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
84.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
83.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
74.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
73.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
73.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
64.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
60.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
56.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
49.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
49.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
47.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
47.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
47.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
46.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
45.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
45.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
44.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
44.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
43.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
43.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
43.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
41.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
40.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
39.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
39.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
39.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
38.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
38.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
38.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
37.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
37.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
37.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
37.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
37.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
35.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
35.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
35.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
34.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
34.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
34.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
33.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
33.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
33.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
32.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
32.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
32.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
31.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
31.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
30.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
30.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
30.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
29.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
29.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
28.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
28.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
28.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
27.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
27.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
27.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
27.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
26.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
26.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
26.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
26.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
26.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
25.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
25.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
25.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
24.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
24.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
24.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
23.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
23.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
23.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
23.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
21.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
21.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
20.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
20.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
19.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
19.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
19.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
19.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
19.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
18.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
16.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
16.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
16.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
15.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
12.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
8.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
8.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
8.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
7.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
6.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
6.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
6.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
6.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
4.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
4.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
4.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
4.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
4.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
4.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
4.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
3.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
3.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A8 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
62.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
54.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
49.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
47.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
46.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
40.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
35.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
32.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
30.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
30.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
29.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
28.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
24.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
22.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
15.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
12.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
10.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
8.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
8.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
8.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
5.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
5.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
4.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
4.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A8 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
242.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
141.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
129.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
125.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
124.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
120.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
118.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
102.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
97.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
96.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
90.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
90.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
89.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
88.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
85.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
83.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
80.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
77.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
77.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
74.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
74.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
73.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
73.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
73.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
70.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
70.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
68.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
68.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
68.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
67.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
67.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
65.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
64.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
64.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
63.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
62.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
61.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
59.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
58.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
58.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
57.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
57.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
56.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
56.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
53.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
52.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
50.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
50.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
50.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
49.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
49.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
49.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
48.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
47.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
47.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
46.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
45.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
45.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
45.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
44.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
44.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
41.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
41.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
39.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
38.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
38.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
38.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
37.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
37.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
36.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
35.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
35.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
34.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
34.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
33.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
32.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
32.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
31.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
30.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
29.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
27.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
27.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
27.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
27.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
25.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
25.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
25.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
25.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
23.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
22.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
22.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
22.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
21.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
21.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
20.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
19.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
17.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
13.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
8.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
6.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
6.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
5.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
5.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
3.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
3.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
2.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
2.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
2.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
2.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
1.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
1.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
